Bleh, should be fixed now in HEAD. Thanks for the report.
Mitch
On 03/08/2011 06:29 AM, Gregg Helt wrote:
> As near as I can tell (by checking for splice site GT/AG consensus)
> all of the subfeatures in JSON data files being generated from BED
> files via flatfile-to-json.pl <http://flatfile-to-json.pl> have both
> their start and end properties offset by -1 from what they should be.
> This doesn't appear to be a new bug -- I've checked both the current
> version of JBrowse and a version from last July, and it has this bug too.
>
> Gregg
>
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