392 |
need % identity for Blast hits to get % id shading to work |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
391 |
need species in game xml to show species label |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
390 |
There are a lot of System.exits that should be changed |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
389 |
need visual flag for splices not on GT/AG |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
388 |
Save GFF as GAME, Position/Feature/Action don\\\'t work |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
387 |
Save GFF as GAME, need error if feats are too long |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
386 |
Save As not appearing in menu for GFF results |
v1.2.3 or later |
open |
Steve Searle
|
2007-05-04
|
2007-05-10
|
1 |
|
385 |
Problem saving GAME XML as GFF |
v1.2.3 or later |
open |
Steve Searle
|
2007-05-04
|
2007-05-10
|
1 |
|
384 |
Genbank writer, Save translational exceptions |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
383 |
Genbank writer, need to know what to print for REFERENCE |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
382 |
Do not make new transcript by dragging a collapsed tier |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
381 |
results that map to more than one annot type will end as gen |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
380 |
AE asks if you want to split genes not being annotated |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
379 |
AE, disable \\\"Create new annotation\\\" option if click is out o |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
378 |
AE, only recalculate ORF if requested (non-std ORF) |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
377 |
AE, allow option to add exons with low scores |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
376 |
AE, need choice when adding exon, \\\"new gene\\\", \\\"add to existi |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
375 |
Add exons and duplicate gives error |
v1.2.3 or later |
open |
|
2007-05-04
|
2007-05-10
|
1 |
|
374 |
When we create a new transcript, should select it |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
373 |
Define \\\"all done\\\", \\\"not done\\\" as constants in code |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
372 |
Confusing peptide status submenu |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
371 |
AE, item brought up on multi-select should depend on positio |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
370 |
AE, if edit removes stop codon should be a warning |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
369 |
AE, start & stop not recalculated after splerge |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|
368 |
AE, split transcript, new one moves to different tier |
v1.2.3 or later |
open |
Nomi Harris
|
2007-05-04
|
2007-05-10
|
1 |
|