EDE87) an exon that was in 2 transcripts i made bigger causing a split
(change in orf) and then smaller causing a remerge - on the merge got
this exception:
java.lang.ArrayIndexOutOfBoundsException: -1
at java.util.Vector.elementAt(Vector.java:434)
at apollo.gui.detailviewers.SeqAlignPanel.removeFeature(SeqAlignPanel.java:620)
at apollo.gui.detailviewers.exonviewer.BaseEditorPanel.detachTranscript(BaseEditorPanel.java:1041)
at apollo.gui.detailviewers.exonviewer.BaseFineEditor.handleAnnotationChangeEvent(BaseFineEditor.java:189)
at apollo.gui.Controller.handleAnnotationChangeEvent(Controller.java:187)
at apollo.editor.ChangeList.fireAnnotationChangeEvent(ChangeList.java:253)
at apollo.editor.ChangeList.executeChanges(ChangeList.java:241)
at apollo.editor.AnnotationEditor.addTranscript(AnnotationEditor.java:3832)
at apollo.editor.AnnotationEditor.consolidateGenes(AnnotationEditor.java:661)
at apollo.editor.AnnotationEditor.setExonTerminus(AnnotationEditor.java:4135)
at apollo.gui.detailviewers.exonviewer.BaseMouseListener.mouseReleased(BaseMouseListener.java:307)
at java.awt.Component.processMouseEvent(Component.java:5099)
