Right now our comments in Apollo are pretty free form. Ideally, Apollo
would read and write GenBank feature table format, like Java SEAN does.
And when you made a comment, it would appear with GenBank feature table CV. Take a look at the ARGS that Sean writes, at
http://flybase.bio.indiana.edu/maps/sean-thumbnails/
If you click on a feature, you eventually get to GenBank feature tables.
Explanation of these is at http://www.ebi.ac.uk/embl/Documentation/FT_definitions/feature_table.html and http://www.ncbi.nlm.nih.gov/BankIt/examples/requirements.html