Genome view will not always look correct when data is loaded

Visualization software for genomics

Brought to you by: loraine, nfreese

Status: open

Owner: nobody

Labels: IGB / Interface (36)

Priority: 5

Updated: 2012-09-20

Created: 2010-07-21

Private: No

After loading DAS/2 data, areas of the screen are greyed out. This is correct. However, there appears to be a disagreement between chromosome coordinate space and genome coordinate space. If, for example, refseq data is loaded for chromosome 1 of H_sapiens, then it appears in the correct location, but the area around x-coord 0 of the display is no longer greyed out.
Loaded data appears to drift slightly beyond the edge of the chromosomes, which is resolved as the user zooms in.