Re: [Genesis-sim-users] question about Genesis via batch systems

[Dave B. <db...@Co...>]

Also, see the Doc genesis.txt and Simulations.txt for suggestions on 
running in the background.

Dave

On 06/06/2017 10:15 AM, Hugo Cornelis wrote:
>
>
> Hi Susan,
>
> I use the screen command for running Genesis in the background.
>
> The screen command detaches the terminal session from your window and 
> continues running in the background.  After detaching, you can 
> reattach a few hours or days later via the same screen command.
>
> Typing screen in a system shell creates a new session.
>
> Typing control-a control-d in such a session detaches that session and 
> puts it in the background.  Running processes continue running (but 
> they must not use any X-Window calls).
>
> Typing screen -ls in a system shell lists all the active screen sessions.
>
> Typing screen -r in a system shell reattach to a running background 
> session.  Output to the terminal is preserved and will be displayed.
>
> The screen command also has logging capabilities.
>
> I hope this helps.
>
> Hugo
>
>
>
> On Mon, Jun 5, 2017 at 10:19 PM, Susan Chacko <su...@he... 
> <mailto:su...@he...>> wrote:
>
>     Hi all,
>
>     I've installed Genesis on a cluster here at the NIH (see
>     https://hpc.nih.gov/apps/genesis.html
>     <https://hpc.nih.gov/apps/genesis.html>). I can see how to run it
>     in an interactive session, as I've documented on our webpage. Can
>     Genesis be run as a detached batch job? I looked through the
>     Genesis documentation, but I couldn't see how to make that work.
>     We run the Slurm batch system here, and I'd like to add
>     instructions for running batch jobs, to guide our users in the
>     right direction.
>
>     Any info or suggestions much appreciated,
>     Susan Chacko.
>
>     -- 
>     Susan Chacko, Ph.D.
>     HPC @ NIH Staff
>
>
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>
> -- 
> Hugo
>
>
>
> --
>
>                   Hugo Cornelis, Ph.D.
>
>                     Agora Classica -- CTO
> http://www.agoraclassica.com/ <http://www.genesis-sim.org/>
>
>             GENESIS-3 -- lead architect
> http://www.genesis-sim.org/
>
>
>
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