Menu

#11773 NTR: MF terms for EC reactions 2.7.7.87, 2.3.1.234, 2.8.4.5

None
closed-accepted
None
5
2015-06-23
2015-06-23
Ingrid
No

These are all enzymes involved in the threonylcarbamoyladenosine modification of tRNAs. I just ran across these again because GO:0070526 seems to have been recently obsoleted, and I looked at some of the proteins in E. coli that were annotated to that term.

Thanks,
Ingrid

Discussion

  • David Hill

    David Hill - 2015-06-23
    • status: open --> closed-accepted
    • assigned_to: David Hill
     
  • David Hill

    David Hill - 2015-06-23

    Hi Ingrid,

    Here are the terms. Let me know if you need anything else.

    [Term]
    +id: GO:0061710
    +name: L-threonylcarbamoyladenylate synthase
    +namespace: molecular_function
    +def: "Catalysis of the reaction: L-threonine + ATP + bicarbonate = L-threonylcarbamoyladenylate + diphosphate + H(2)O." [EC:2.7.7.87]
    +xref: EC:2.7.7.87
    +xref: MetaCyc:RXN-14569
    +xref: RHEA:36410
    +is_a: GO:0016779 ! nucleotidyltransferase activity
    +created_by: dph
    +creation_date: 2015-06-23T08:25:14Z
    +
    +[Term]
    +id: GO:0061711
    +name: N(6)-L-threonylcarbamoyladenine synthase
    +namespace: molecular_function
    +def: "Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA." [EC:2.3.1.234]
    +xref: EC:2.3.1.234
    +xref: MetaCyc:RXN-14570
    +xref: RHEA:37062
    +is_a: GO:0016747 ! transferase activity, transferring acyl groups other than amino-acyl groups
    +created_by: dph
    +creation_date: 2015-06-23T08:34:44Z
    +
    +[Term]
    +id: GO:0061712
    +name: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
    +namespace: molecular_function
    +def: "Catalysis of the reaction: N(6)-L-threonylcarbamoyladenine(37) in tRNA + sulfur-(sulfur carrier) + 2 S-adenosyl-L-methionine = 2-methylthio-N(6)-L-threonylcarbamoyladenine(37) in tRNA + S-adenosyl-L-homocysteine + (sulfur carrier) + L-methionine + 5'-deoxyadenosine." [EC:2.8.4.5]
    +xref: EC:2.8.4.5
    +xref: MetaCyc:RXN-14531
    +xref: RHEA:37078
    +is_a: GO:0050497 ! transferase activity, transferring alkylthio groups
    +created_by: dph
    +creation_date: 2015-06-23T08:47:10Z
    +

    -David

     

Log in to post a comment.