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#11476 add parentage for new TermGenie-added term

None
closed
5
2015-01-21
2015-01-21
No

Hi,

I just created a term using TG:

GO:1903830 Label: magnesium ion transmembrane transport

and then created another term that should be its is_a child term:

GO:1990614 Label: mitochondrial magnesium ion transmembrane transport

I thought that the TG interface would accept the new GOID when adding parentage, but it didn't, so I guess this relationship needs to be added manually. Sorry about that.

Thanks,
Maria

Discussion

  • Tanya Berardini

    Tanya Berardini - 2015-01-21

    The new parent needs to be a valid GO term so that's why it didn't work. :)

     
  • Tanya Berardini

    Tanya Berardini - 2015-01-21
    • labels: --> add parent relationship
    • assigned_to: Tanya Berardini
     
  • Tanya Berardini

    Tanya Berardini - 2015-01-21
    • status: open --> closed
     
  • Tanya Berardini

    Tanya Berardini - 2015-01-21

    Second is_a parent added.

    [Term]
    id: GO:1990614
    name: mitochondrial magnesium ion transmembrane transport
    namespace: biological_process
    def: "A process in which a magnesium ion is transported from one side of a mitochondrial membrane to the other by means of some agent such as a transporter or pore." [PMID:11254124]
    is_a: GO:1903830 ! magnesium ion transmembrane transport
    is_a: GO:1990542 ! mitochondrial transmembrane transport
    created_by: mcc
    creation_date: 2015-01-21T17:44:38Z

     

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