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#1197 InterPro:IPR012613 - acid soluble spore protein includes C. elegans protein

InterPro
closed-fixed
nobody
None
5
2014-06-25
2014-06-25
No

Hi,
In an error-checking script for our gene association file, we discovered that InterPro:IPR012613, small acid-soluble spore protein, SspO, is associated with the C. elegans BLI-1 (UniProtKB:Q09457) cuticle collagen.

This results in BLI-1 being associated incorrectly with sporulation-related GO BP and MF terms.

Can you please review this family and associated mappings?

Thanks,
--Kimberly Van Auken

Discussion

  • KM Van Auken

    KM Van Auken - 2014-06-25

    Hi,
    Also note that two other proteins from C. briggsae and C. remanei are also associated with this family.

    Thanks,
    --Kimberly

     
  • Hsin-Yu Chang

    Hsin-Yu Chang - 2014-06-25

    Hello Kimberly,

    Thank you for this. I have removed one of the signatures that hits these eukaryotic proteins. Therefore, the GO terms won't be applied to them anymore. This result will be shown in InterPro48.0.

    Regards,

    Hsin-Yu

     
  • Hsin-Yu Chang

    Hsin-Yu Chang - 2014-06-25
    • status: open --> closed-fixed
     

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