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File Date Author Commit
 mm9_re_sites 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 Beta-major-prom-FB.tab 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 Beta-major-prom-FL.tab 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 PCRDupCheck.pl 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 TUTORIAL.html 2016-02-18 Josh Starmer Josh Starmer [0721d4] minor typo correction
 associateAndCheckBarCodes.pl 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 bamToReTab.pl 2015-06-22 Josh Starmer Josh Starmer [004d3c] We can now read BAM files, and chromosome names...
 bowtieToReTab.pl 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fb_results.pdf 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fb_results.png 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fl_results.pdf 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fl_results.png 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fl_results_ucsc_genome.pdf 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fl_results_ucsc_genome.png 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
 fourSig.R 2017-05-31 Josh Starmer Josh Starmer [cedf02] minor changes
 motifFinder.pl 2015-05-27 Josh Starmer Josh Starmer [1c30fd] improved error messages
 neighboring_domains.pdf 2015-12-01 Josh Starmer Josh Starmer [0b26ec] added to help with the documentation
 neighboring_domains.pptx 2015-12-01 Josh Starmer Josh Starmer [0b26ec] added to help with the documentation
 plotReads.R 2016-02-16 Josh Starmer Josh Starmer [51de38] fixed some bugs with saving output in BED format
 readsToWindows.R 2016-04-18 Josh Starmer Josh Starmer [033dcf] Fixed a problem when there are no reads mapping...
 samToReTab.pl 2015-06-22 Josh Starmer Josh Starmer [004d3c] We can now read BAM files, and chromosome names...
 sig_window_overlap.pdf 2015-12-01 Josh Starmer Josh Starmer [0b26ec] added to help with the documentation
 sig_window_overlap.pptx 2015-12-01 Josh Starmer Josh Starmer [0b26ec] added to help with the documentation
 trimFastq.pl 2014-11-19 Josh Starmer Josh Starmer [a1c875] Initial commit
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