My project was updated today and I already submitted a report about getting extra trove values (bug 464), now I just tried to remove the last extra one (the other license thing), but the adminpage shows no throve settings selected, while the summary page shows them just fine.
Some other small points. I had to re-enter the short summary on the metadata page (as it was missing). And I am not sure if the code conversion went okay as they svn and cvs are called code and code-0, but it could be that it isn't finished as we didn't get an email that the conversion was finished.
attached a screenshot of code problem and throve settings problem