#2 Problem with DataAnalysis

[Luka Topalovic]

I think problem is when MakeReadCounts.R script calls if (count <= 0) because I get error like this:

mkdir: cannot create directory 'output/.tmp': File exists
Error in if (control <= 0) { : missing value where TRUE/FALSE needed
In addition: Warning message:
In as.integer(unlist(strsplit(tt, "\t"))[pari]) :
NAs introduced by coercion
Execution halted

[Luka Topalovic]

Problem solved! Error was not setting sample name in path of output directory.

[gan shuang]

I got a similar problem like you but I do not understand how you solve it,can you share some specification? Thank you!