Christian Iseli committed [2a4380] on Code

Automatic commit of package [perl-BTLib] release [0.23-3].

Christian Iseli committed [134556] on Code

update for tito build

Christian Iseli committed [78b04d] on Code

Automatic commit of package [perl-BTLib] release [0.23-2].

Christian Iseli committed [ece5eb] on Code

update for tito build

Christian Iseli committed [cf380e] on Code

Automatic commit of package [perl-BTLib] release [0.23-1].

Christian Iseli committed [9d63e2] on Code

add BASE=. line in fetch.conf to get relative PATH; bump to version 0.23

Christian Iseli committed [572a75] on Code

Initialized to use tito.

Christian Iseli committed [67c648] on Code

add BASE=. line in fetch.conf to get relative PATH; bump to version 0.23

Christian Iseli committed [6f76ea]

fix field start issue; bump to version 0.22

Christian Iseli committed [9545b9]

bump to version 0.21; change field width in .ptr index files

Juhani Numminen created ticket #5

patch: Makefile improvements

ESTScan released /BTLib/0.20/perl-BTLib-0.20-0.fc29.src.rpm

ESTScan released /BTLib/0.20/BTLib-0.20.tar.gz

Christian Iseli committed [84830e]

Use File::Temp for tmpnam; cleanup spec file

Christian Iseli committed [021eb4]

remove remaining CVS cruft

c4chris <> committed [c43c61]

Initial import.

c4chris <> committed [b4ce99]

Split evaluate_model.

c4chris <> committed [83736e]

Add James paper from BMC Bioinformatics.

c4chris <> committed [9fb2d6]

Add link to EMBNet page for mailing list.

c4chris <> committed [aab29e]

Speed up EST fetching.

c4chris <> committed [ebd541]

Fix rpmlint warnings.

c4chris <> committed [4d3a47]

Try to speed things up.

c4chris <> committed [f3216b]

Remove remnants of type method.

c4chris <> committed [392e31]

Bump to version 0.12.

c4chris <> committed [eb7561]

Fix typo.

root <> committed [e92064]

initial checkin

c4chris <> committed [ec78c9]

Split functionnality of build_model.

c4chris <> committed [c89812]

Fix names in doc.

c4chris <> committed [fcac94]

Add -s switch, and do some cleanup.

c4chris <> committed [8b00c9]

Cleanup various warnings. Fix a couple problems.

c4chris <> committed [8f44bd]

Add perl-BTLib.spec.

c4chris <> committed [201a9f]

Fix usage info.

c4chris <> committed [113fc5]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_11'.

c4chris <> committed [49d6ae]

Replace obsoleted HTML::Parse with current stuff.

c4chris <> committed [5113b8]

Add some options to evaluate_model.

c4chris <> committed [5f8902]

Fix typo.

c4chris <> committed [1f04a6]

Add more files: build_model build_model_utils.pl evaluate_model makesmat.c maskred.c winsegshuffle.f.

c4chris <> committed [a5912a]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_12'.

c4chris <> committed [75940f]

Fix some problems in building and evaluating models.

c4chris <> committed [2e33c5]

Use global var for program name.

c4chris <> committed [56b7b5]

Remove PIR remnants.

c4chris <> committed [2ad2c3]

Update fetch.conf.

c4chris <> committed [5b4dee]

Import BTLib.

c4chris <> committed [55ba2d]

Fix wc output parsing. Fix typo.

c4chris <> committed [fe39ed]

Add Makefile kindly provided by Tim Cutts.

c4chris <> committed [1a9329]

Web page creation.

c4chris <> committed [6a521b]

Also evaluate RNA on direct strand only.

c4chris <> committed [e68e4c]

Try to improve output a bit.

c4chris <> committed [e1c7e5]

Fix warning.

c4chris <> committed [68abbc]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_10'.

c4chris <> committed [73f0aa]

Add link to EMBNet page for mailing list.

c4chris <> committed [dfcb76]

Don't crash on empty sequences.

c4chris <> committed [2f77b1]

Version bump to 0.11.

c4chris <> committed [028ad4]

Integrate test results.

c4chris <> committed [a9dab0]

Bump to version 0.13.

c4chris <> committed [5c7f2a]

Do not mess FASTA header line.

c4chris <> committed [9901e9]

This commit was manufactured by cvs2svn to create tag 'ESTScan_2_1'.

c4chris <> committed [118c8c]

This commit was manufactured by cvs2svn to create tag 'ESTScan_3_0_1'.

c4chris <> committed [30a768]

Bump to version 0.16.

c4chris <> committed [deecab]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_19'.

c4chris <> committed [d01059]

Import to SourceForge.

c4chris <> committed [2a464a]

Bump to version 0.18.

c4chris <> committed [305b14]

Bump to version 0.15.

c4chris <> committed [88de73]

No README file ATM...

c4chris <> committed [2010c7]

New version of SwissProt ID line.

c4chris <> committed [a32687]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_16'.

c4chris <> committed [f46cb4]

Add doc in spec file.

c4chris <> committed [d3b8b6]

Fix OS parsing.

c4chris <> committed [daf0b7]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_17'.

c4chris <> committed [bd4ec5]

Properly use POSIX::ceil().

c4chris <> committed [6b9978]

Import ESTScan2.

c4chris <> committed [4b727a]

Fix logo link as per request.

c4chris <> committed [313a90]

Add taxonomic pieces.

c4chris <> committed [d1ba5a]

Update changelog.

c4chris <> committed [a2c299]

Fix bad type (con -> gb). Hopefully the last one...

c4chris <> committed [309a1a]

Update changelog.

c4chris <> committed [8e7ec5]

Also translate ambiguous nucleotides.

c4chris <> committed [4432f3]

Make use of new BTLib version 0.16 (can now parse general GenBank format hopefully).

c4chris <> committed [7dc547]

Integrate test results.

c4chris <> committed [b9a5ef]

This commit was manufactured by cvs2svn to create tag 'ESTScan_2_1_1'.

c4chris <> committed [348bac]

Fix bad type (con -> gb).

c4chris <> committed [a70b17]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_15'.

c4chris <> committed [d92ba3]

Use /usr/bin/perl in shebang so that autodep works.

c4chris <> committed [df7420]

This commit was manufactured by cvs2svn to create tag 'ESTScan_3_0_3'.

c4chris <> committed [af822d]

This commit was manufactured by cvs2svn to create tag 'ESTScan_3_0'.

c4chris <> committed [cabdca]

This commit was manufactured by cvs2svn to create tag 'BTLib_0_14'.

c4chris <> committed [3b1d05]

Fedora 7 needs more BuildRequires.

c4chris <> committed [faacbe]

Add comment about RPM depsolver.

c4chris <> committed [d1e399]

Put version 1.3 everywhere.

c4chris <> committed [41f3c5]

Add some stuff in fetch.conf.

c4chris <> committed [3bdc6d]

Fix masked nucleotides report message.

c4chris <> committed [b43461]

Add text from Ludivine.

c4chris <> committed [844d7e]

Changed 'use POSIX qw(blah)' to make older perl versions happy.

c4chris <> committed [709bb2]

Fix a few typos. Clarify a few things.

c4chris <> committed [168606]

This commit was manufactured by cvs2svn to create tag 'ESTScan_3_0_2'.

c4chris <> committed [d61b63]

Fix typo.

c4chris <> committed [a1d94c]

Bump to version 3.0.3.

c4chris <> committed [6d93a1]

Properly count nt (skip newlines).

c4chris <> committed [07d7b3]

Fix BuildRequires.

c4chris <> committed [40af44]

Cleanup use clauses. Cleanup version numbers. Use GBFile instead of CONFile.