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Home modified by Bence Ágg

Bence Ágg — Mon, 27 Jan 2020 13:09:51 -0000

--- v11
+++ v12
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 The goal of this project to implement a graph layout / network visualization algorithm using a recently published relative entropy optimization based method, called Unified Data Representation ([Kovács IA et al. Sci Rep. 2015](https://www.nature.com/articles/srep13786)). If you are using the plugin, **please cite**:

-*Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks, Bioinformatics 35, in press*
+*Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) [The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks](https://academic.oup.com/bioinformatics/article/35/21/4490/5475596), Bioinformatics 35(21):4490-4492

 Our detailed Tutorial on the use of the plugin: [EntOptLayout Tutorial](https://suopte.com/entopt_2_1_tutorial_20190227.pdf)

Home modified by Bence Ágg

Bence Ágg — Tue, 09 Apr 2019 07:45:57 -0000

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+++ v11
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 A video about the version 2.1: [EntOptLayout Tutorial Video](http://suopte.com/entopt_2_1_tutorial_video.mp4)

-This is an open source project, hosted on SourceForge. You can check the source code and issue support tickets here: https://sourceforge.net/projects/entopt/
+The latest version of the plugin can be downloaded from the  [Cytoscape App Store](http://apps.cytoscape.org/apps/entoptlayout)

 Don't hesitate to send any questions, comments or bug reports also to agg.bence {at} med.semmelweis-univ.hu. Any feedback from You is most welcomed!

Home modified by Bence Ágg

Bence Ágg — Tue, 09 Apr 2019 07:43:50 -0000

--- v9
+++ v10
@@ -1,3 +1,18 @@
+The goal of this project to implement a graph layout / network visualization algorithm using a recently published relative entropy optimization based method, called Unified Data Representation ([Kovács IA et al. Sci Rep. 2015](https://www.nature.com/articles/srep13786)). If you are using the plugin, **please cite**:
+
+*Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks, Bioinformatics 35, in press*
+
+Our detailed Tutorial on the use of the plugin: [EntOptLayout Tutorial](https://suopte.com/entopt_2_1_tutorial_20190227.pdf)
+
+A video about the version 2.1: [EntOptLayout Tutorial Video](http://suopte.com/entopt_2_1_tutorial_video.mp4)
+
+This is an open source project, hosted on SourceForge. You can check the source code and issue support tickets here: https://sourceforge.net/projects/entopt/
+
+Don't hesitate to send any questions, comments or bug reports also to agg.bence {at} med.semmelweis-univ.hu. Any feedback from You is most welcomed!
+
+Good Luck and Have Fun :)
+
+
 [[members limit=20]]

 ######Authors:

Home modified by Bence Ágg

Bence Ágg — Tue, 03 Oct 2017 08:44:45 -0000

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+++ v9
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-Welcome to your wiki!
-
 [[members limit=20]]

 ######Authors:

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:38:07 -0000

--- v7
+++ v8
@@ -5,11 +5,11 @@
 ######Authors:
 - Bence Agg
 - Andrea Császár
-Mate Szalay-Beko
-Dániel V. Veres
-Réka Mizsei
-Péter Ferdinandy
-Péter Csermely
-István A. Kovács
+- Mate Szalay-Beko
+- Dániel V. Veres
+- Réka Mizsei
+- Péter Ferdinandy
+- Péter Csermely
+- István A. Kovács

 [[download_button]]

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:37:51 -0000

--- v6
+++ v7
@@ -3,8 +3,8 @@
 [[members limit=20]]

 ######Authors:
-    Bence Agg
-Andrea Császár
+- Bence Agg
+- Andrea Császár
 Mate Szalay-Beko
 Dániel V. Veres
 Réka Mizsei

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:37:38 -0000

--- v5
+++ v6
@@ -3,7 +3,7 @@
 [[members limit=20]]

 ######Authors:
-Bence Agg
+    Bence Agg
 Andrea Császár
 Mate Szalay-Beko
 Dániel V. Veres

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:37:20 -0000

--- v4
+++ v5
@@ -2,14 +2,14 @@

 [[members limit=20]]

-Authors:
-* Bence Agg
-* Andrea Császár
-* Mate Szalay-Beko
-* Dániel V. Veres
-* Réka Mizsei
-* Péter Ferdinandy
-* Péter Csermely
-* István A. Kovács
+######Authors:
+Bence Agg
+Andrea Császár
+Mate Szalay-Beko
+Dániel V. Veres
+Réka Mizsei
+Péter Ferdinandy
+Péter Csermely
+István A. Kovács

 [[download_button]]

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:36:20 -0000

Home modified by Bence Ágg

Bence Ágg — Mon, 02 Oct 2017 15:35:44 -0000

--- v2
+++ v3
@@ -2,5 +2,14 @@

 [[members limit=20]]

+Authors:
+* Bence Agg
+* Andrea Császár
+* Mate Szalay-Beko
+* Dániel V. Veres
+* Réka Mizsei
+* Péter Ferdinandy
+* Péter Csermely
+* István A. Kovács

 [[download_button]]