Re: [Ecell-users] Ecell-3.2.2 installation problem

[luli <lu...@eb...>]

Dear Yasuhiro,

The problem listed in my previous e-mail has been solved by setting 
LD_LIBRARY_PATH to my local folder where Ecell has been installed 
(thanks to Michele Mattioni).

Cheers
Lu

On 19/03/12 15:38, luli wrote:
> Dear Yasuhiro,
>
> Thank you very much for your reply.
> It seems ecell-3.2.3pre2 can be compiled, following the following commands:
> ./configure --prefix=[myLocalFolder]
> make
> make install
>
> However, when I use ecell3-session to run a model (for instance,
> ecell3-session run.py), I got the following error message:
>
> Traceback (most recent call last):
>     File "../bin/ecell3.2.3pre2/bin/ecell3-session", line 9, in<module>
>       import ecell.ecs
>     File
> "/home/luli/bin/ecell3.2.3pre2/lib/python2.7/site-packages/ecell/ecs.py", line
> 28, in<module>
>       import ecell._ecs
> ImportError: libecs.so.2: cannot open shared object file: No such file
> or directory
>
>
> Could your please give some advice to fix this?
>
> The linux distribution I am using is: Ubuntu 11.10 (Oneiric Ocelot).
>
> Best Regards
> Lu
>
> On 18/03/12 16:37, Yasuhiro Naito wrote:
>> Dear Lu,
>>
>> Thank you for the report.
>>
>> Could you try ecell-3.2.3pre2? E-Cell 3.2.2 has some incompatibilities with recent boost C++ library.
>> The source code of ecell-3.2.3pre2 is available at following:
>> https://github.com/ecell/ecell3/downloads
>>
>> Please let me know your LINUX distribution and version. We'd like to reproduce your situation.
>>
>> Regards,
>>
>> -----
>> Yasuhiro Naito
>> Institute for Advanced Biosciences, Keio University
>>
>>
>>> I am trying to install the latest Ecell (3.2.2), but unsuccessfully.
>>>
>>> First of all, your repository of pre-built packages (for debian and
>>> ubuntu) is down.
>>>
>>> Secondly, I tried to install the source from both sourceForge and
>>> GitHub. During "make", I obtained the following logs:
>>
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