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From: Erin <she...@um...> - 2010-03-29 14:19:34
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Hello,
I posted this to ecell-users but I think it's actually a bug, so I'll
repost here. After running a simulation via an ess file, I get the
following errors:
erin@bobby:~/modelingFiles$ ecell3-session experiment.py
Running for a minute
Simulation complete!
Traceback (most recent call last):
File \"/usr/bin/ecell3-session\", line 234, in <module>
main()
File \"/usr/bin/ecell3-session\", line 229, in main
aConsole.loadScript( anEssFile, aParameters )
File \"/usr/bin/ecell3-session\", line 56, in loadScript
execfile( ecsFile, aContext )
File \"experiment.py\", line 68, in <module>
malateResults.save( \'malateResults.ecd\' )
File \"/usr/lib/python2.6/dist-packages/ecell/ECDDataFile.py\", line 91,
in save
TableIO.writeArray( self.theFileName, self.theData, 1 )
File \"/usr/lib/python2.6/dist-packages/ecell/TableIO.py\", line 79, in
writeArray
t[\'rows\'] = data.shape[0]
AttributeError: \'ecell._ecs.DataPointVector\' object has no attribute
\'shape\'
The file "malateResults" is created however, it contains only headers
and no data.
I am using E-Cell 3.2.0p1 on Ubuntu 9.10.
Thanks,
Erin
--
Erin Rachael Shellman
The University of Michigan
Bioinformatics PhD Candidate
http://www.erinshellman.com
she...@um...
(937) 321.1129
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