Re: [Ecell-devel] build error with dmcompile: getopt.GetoptError: option -p not recognized

[Moriyoshi K. <mo...@sf...>]

Hi,

Looks like the -pipe option that was passed to ecell3-dmc got
interpreted as a set of short options -p -i -e, which are of course
unsupported by it. Try removing them from CXXFLAGS.

-- moriyoshi



On Thu, Aug 20, 2009 at 1:16 AM, Eric
Fernandez<efe...@ph...> wrote:
> Hi,
>
> I have a build problem with latest stable verion 3.1.107:
>
> make[4]: Entering directory
> `/home/zeb/svn/ecell/BUILD/ecell-3.1.107/ecell/dm'
> ../pyecell/ecell3-python ../bin/ecell3-dmc --verbose
> --dmcompile="../../dmtool" --no-stdinclude --no-stdlibdir
> --ldflags="-L/home/zeb/svn/ecell/BUILD/ecell-3.1.107/ecell/tmp/usr/lib
> -L
> /usr/lib -lgsl -lgslcblas -lm" --cxxflags='-I/usr/include -O2 -g -pipe
> -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> -fstack-protector --param=ssp-buffer-size=4
>  -fomit-frame-pointer -march=i586 -mtune=generic
> -fasynchronous-unwind-tables -Wno-pmf-conversions -I../libecs -I../..
> -I.. -I../../libltdl  -I/usr/include/python2.6 ' MassActionFluxPr
> ocess.cpp
> ../../dmtool/dmcompile -v -I/usr/include -O2 -g -pipe -Wformat
> -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> -fstack-protector --param=ssp-buffer-size=4 -fomit-frame-poi
> nter -march=i586 -mtune=generic -fasynchronous-unwind-tables
> -Wno-pmf-conversions -I../libecs -I../.. -I.. -I../../libltdl
> -I/usr/include/python2.6 -L/home/zeb/svn/ecell/BUILD/ecell-3.
> 1.107/ecell/tmp/usr/lib -L/usr/lib -lgsl -lgslcblas -lm -lecs -lgsl
> -lboost_python -D_ECELL3_DM_CLASSNAME=MassActionFluxProcess
> MassActionFluxProcess.cpp
> Traceback (most recent call last):
>  File "../../dmtool/dmcompile", line 158, in <module>
>    sys.exit( main() )
>  File "../../dmtool/dmcompile", line 56, in main
>    opts , args = getopt.gnu_getopt( sys.argv[1:],
> "hvI:L:l:o:D:f:m:O:W:g", ["help", "verbose", "output=" ])
>  File "/usr/lib/python2.6/getopt.py", line 134, in gnu_getopt
>    opts, args = do_shorts(opts, args[0][1:], shortopts, args[1:])
>  File "/usr/lib/python2.6/getopt.py", line 191, in do_shorts
>    if short_has_arg(opt, shortopts):
>  File "/usr/lib/python2.6/getopt.py", line 207, in short_has_arg
>    raise GetoptError('option -%s not recognized' % opt, opt)
> getopt.GetoptError: option -p not recognized
> ecell3-dmc: ../../dmtool/dmcompile returned error status: 1
>
> Any idea ?
>
> Thanks,
> Eric
>
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