<?xml version="1.0" encoding="utf-8"?>
<rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Recent changes to Home</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>Recent changes to Home</description><atom:link href="https://sourceforge.net/p/dtailor/wiki/Home/feed" rel="self"/><language>en</language><lastBuildDate>Thu, 28 Feb 2013 16:38:36 -0000</lastBuildDate><atom:link href="https://sourceforge.net/p/dtailor/wiki/Home/feed" rel="self" type="application/rss+xml"/><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v6
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 Summary:

-Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D-Tailor), a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.
+Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of artificial sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D Tailor), a fully extendable software framework for multi-objective design of synthetic sequences. Specifically, D-Tailor permits the seamless integration of multiple sequence analysis tools into a Monte-Carlo algorithm for designing libraries of sequences that vary over a range of rationally defined parameters.

 **Source code:** Link1

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Thu, 28 Feb 2013 16:38:36 -0000</pubDate><guid>https://sourceforge.net46da85017bd211ee39dfada58b919649c5008259</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 18:31:17 -0000</pubDate><guid>https://sourceforge.net6706f2e84b3c47391a3f6aa7163edd8438a0025a</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v4
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 Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D-Tailor), a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.

+**Source code:** Link1
+
+**Tutorial:** Link1
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 18:23:36 -0000</pubDate><guid>https://sourceforge.net2910416e0bccee47a260fccef58f619f0764f081</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v3
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 Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D-Tailor), a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.

-[[img src=SeqDesigner_Fig1.v04.png  alt=foobar]]
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 18:22:26 -0000</pubDate><guid>https://sourceforge.neta9e2edf94c08711731b27aec02f509abcecaa46d</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v2
+++ v3
@@ -5,3 +5,4 @@

 Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D-Tailor), a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.

+[[img src=SeqDesigner_Fig1.v04.png  alt=foobar]]
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 18:20:24 -0000</pubDate><guid>https://sourceforge.nete6ac7f39bae2f45ea18af84f4b81ae1e72b9da93</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v1
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-Welcome to your wiki!
+D-Tailor: automated analysis and design of DNA sequences
+=====

-This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage].
+Summary:

-The wiki uses [Markdown](/p/dtailor/wiki/markdown_syntax/) syntax.
+Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. We developed DNA-Tailor (D-Tailor), a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.

-[[project_admins]]
-[[download_button]]
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 18:12:47 -0000</pubDate><guid>https://sourceforge.netf7ef9b293ee19dece792d06745f6961dbe2c694a</guid></item><item><title>WikiPage Home modified by jcg</title><link>https://sourceforge.net/p/dtailor/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;p&gt;Welcome to your wiki!&lt;/p&gt;
&lt;p&gt;This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: &lt;a class="alink" href="SamplePage"&gt;[SamplePage]&lt;/a&gt;.&lt;/p&gt;
&lt;p&gt;The wiki uses &lt;a class="" href="/p/dtailor/wiki/markdown_syntax/"&gt;Markdown&lt;/a&gt; syntax.&lt;/p&gt;
&lt;p&gt;&lt;a href="/u/jcasguimaraes/"&gt;jcg&lt;/a&gt;&lt;br /&gt;&lt;br /&gt;
&lt;span class="download-button-50f4e89b1be1ce73b273bb1f" style="margin-bottom: 1em; display: block;"&gt;&lt;/span&gt;&lt;/p&gt;&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">jcg</dc:creator><pubDate>Tue, 15 Jan 2013 05:26:52 -0000</pubDate><guid>https://sourceforge.net01a34dde8579b2abd59407432908fd2ade689214</guid></item></channel></rss>