Menu
▾
▴
[DL-Learner SVN] SF.net SVN: dl-learner:[3940] trunk/components-core/src/main/java/org/ dllearner/algorithms/pattern
|
From: <lor...@us...> - 2013-05-03 08:49:20
|
Revision: 3940
http://sourceforge.net/p/dl-learner/code/3940
Author: lorenz_b
Date: 2013-05-03 08:49:17 +0000 (Fri, 03 May 2013)
Log Message:
-----------
Added axiomtype column.
Modified Paths:
--------------
trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomPatternFinder.java
trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomRenamer.java
Modified: trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomPatternFinder.java
===================================================================
--- trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomPatternFinder.java 2013-05-03 08:48:11 UTC (rev 3939)
+++ trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomPatternFinder.java 2013-05-03 08:49:17 UTC (rev 3940)
@@ -81,7 +81,7 @@
private OWLObjectRenderer axiomRenderer = new ManchesterOWLSyntaxOWLObjectRendererImpl();
- private boolean randomOrder = true;
+ private boolean randomOrder = false;
public OWLAxiomPatternFinder(OWLOntologyDataset dataset) {
@@ -113,7 +113,7 @@
", abox_axioms, classes, object_properties, data_properties, individuals) VALUES(?,?,?,?,?,?,?,?,?,?,?)");
insertOntologyErrorPs = conn.prepareStatement("INSERT INTO Ontology (url, iri, repository) VALUES(?,?,?)");
selectPatternIdPs = conn.prepareStatement("SELECT id FROM Pattern WHERE pattern=?");
- insertPatternIdPs = conn.prepareStatement("INSERT INTO Pattern (pattern,pattern_pretty) VALUES(?,?)");
+ insertPatternIdPs = conn.prepareStatement("INSERT INTO Pattern (pattern,pattern_pretty,axiom_type) VALUES(?,?,?)");
insertOntologyPatternPs = conn.prepareStatement("INSERT INTO Ontology_Pattern (ontology_id, pattern_id, occurrences) VALUES(?,?,?)");
} catch (SQLException e) {
e.printStackTrace();
@@ -168,6 +168,7 @@
+ "id MEDIUMINT NOT NULL AUTO_INCREMENT,"
+ "pattern TEXT NOT NULL,"
+ "pattern_pretty TEXT NOT NULL,"
+ + "axiom_type VARCHAR(15) NOT NULL,"
+ "PRIMARY KEY(id),"
+ "INDEX(pattern(8000))) DEFAULT CHARSET=utf8");
@@ -216,9 +217,10 @@
try {
insertPatternIdPs.setString(1, axiomString);
insertPatternIdPs.setString(2, axiomRenderer.render(axiom));
+ insertPatternIdPs.setString(3, getAxiomType(axiom));
insertPatternIdPs.execute();
} catch (SQLException e) {
- System.out.println(axiomString.length());
+ System.err.println("Pattern too long for database?" + axiomString.length());
e.printStackTrace();
}
//get the auto generated ID
@@ -234,6 +236,22 @@
return -1;
}
+ private String getAxiomType(OWLAxiom axiom){
+ AxiomType<?> type = axiom.getAxiomType();
+ String s;
+ if(AxiomType.TBoxAxiomTypes.contains(type)){
+ s = "TBox";
+ } else if(AxiomType.RBoxAxiomTypes.contains(type)){
+ s = "RBox";
+ } else if(AxiomType.ABoxAxiomTypes.contains(type)){
+ s = "ABox";
+ } else {System.out.println(axiom + "-" + type);
+ //should not happen
+ s="Non-Logical";
+ }
+ return s;
+ }
+
private boolean ontologyProcessed(URI uri){
//check if ontology was already processed
try {
@@ -287,13 +305,11 @@
insertOntologyPs.setString(1, url);
insertOntologyPs.setString(2, ontologyIRI);
insertOntologyPs.setString(3, repository.getName());
- Set<OWLAxiom> logicalAxioms = new HashSet<OWLAxiom>();
- logicalAxioms.addAll(ontology.getLogicalAxioms());
- Set<OWLAxiom> tbox = AxiomType.getAxiomsOfTypes(logicalAxioms, new ArrayList<AxiomType>(AxiomType.TBoxAxiomTypes).toArray(new AxiomType[AxiomType.TBoxAxiomTypes.size()]));
- Set<OWLAxiom> rbox = AxiomType.getAxiomsOfTypes(logicalAxioms, new ArrayList<AxiomType>(AxiomType.RBoxAxiomTypes).toArray(new AxiomType[AxiomType.RBoxAxiomTypes.size()]));
- Set<OWLAxiom> abox = AxiomType.getAxiomsOfTypes(logicalAxioms, new ArrayList<AxiomType>(AxiomType.ABoxAxiomTypes).toArray(new AxiomType[AxiomType.ABoxAxiomTypes.size()]));
+ Set<OWLAxiom> tbox = ontology.getTBoxAxioms(true);
+ Set<OWLAxiom> rbox = ontology.getRBoxAxioms(true);
+ Set<OWLAxiom> abox = ontology.getABoxAxioms(true);
- insertOntologyPs.setInt(4, ontology.getLogicalAxiomCount());
+ insertOntologyPs.setInt(4, tbox.size() + rbox.size() + abox.size());
insertOntologyPs.setInt(5, tbox.size());
insertOntologyPs.setInt(6, rbox.size());
insertOntologyPs.setInt(7, abox.size());
Modified: trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomRenamer.java
===================================================================
--- trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomRenamer.java 2013-05-03 08:48:11 UTC (rev 3939)
+++ trunk/components-core/src/main/java/org/dllearner/algorithms/pattern/OWLAxiomRenamer.java 2013-05-03 08:49:17 UTC (rev 3940)
@@ -48,6 +48,7 @@
import org.semanticweb.owlapi.model.OWLObjectPropertyDomainAxiom;
import org.semanticweb.owlapi.model.OWLObjectPropertyExpression;
import org.semanticweb.owlapi.model.OWLObjectPropertyRangeAxiom;
+import org.semanticweb.owlapi.model.OWLPropertyExpression;
import org.semanticweb.owlapi.model.OWLReflexiveObjectPropertyAxiom;
import org.semanticweb.owlapi.model.OWLSameIndividualAxiom;
import org.semanticweb.owlapi.model.OWLSubAnnotationPropertyOfAxiom;
@@ -86,27 +87,14 @@
}
@Override
- public void visit(OWLAnnotationAssertionAxiom axiom) {
- }
-
- @Override
- public void visit(OWLSubAnnotationPropertyOfAxiom axiom) {
- }
-
- @Override
- public void visit(OWLAnnotationPropertyDomainAxiom axiom) {
- }
-
- @Override
- public void visit(OWLAnnotationPropertyRangeAxiom axiom) {
- }
-
- @Override
- public void visit(OWLDeclarationAxiom axiom) {
- }
-
- @Override
public void visit(OWLNegativeObjectPropertyAssertionAxiom axiom) {
+ OWLObjectPropertyExpression property = axiom.getProperty();
+ property = expressionRenamer.rename(property);
+ OWLIndividual subject = axiom.getSubject();
+ subject = expressionRenamer.rename(subject);
+ OWLIndividual object = axiom.getObject();
+ object = expressionRenamer.rename(object);
+ renamedAxiom = df.getOWLNegativeObjectPropertyAssertionAxiom(property, subject, object);
}
@Override
@@ -163,7 +151,13 @@
@Override
public void visit(OWLNegativeDataPropertyAssertionAxiom axiom) {
-// axiom.
+ OWLDataPropertyExpression property = axiom.getProperty();
+ property = expressionRenamer.rename(property);
+ OWLIndividual subject = axiom.getSubject();
+ subject = expressionRenamer.rename(subject);
+ OWLLiteral object = axiom.getObject();
+ object = expressionRenamer.rename(object);
+ renamedAxiom = df.getOWLNegativeDataPropertyAssertionAxiom(property, subject, object);
}
@Override
@@ -347,6 +341,14 @@
@Override
public void visit(OWLSubPropertyChainOfAxiom axiom) {
+ OWLObjectPropertyExpression superProperty = axiom.getSuperProperty();
+ superProperty = expressionRenamer.rename(superProperty);
+ List<OWLObjectPropertyExpression> subPropertyChain = axiom.getPropertyChain();
+ List<OWLObjectPropertyExpression> renamedSubPropertyChain = axiom.getPropertyChain();
+ for (OWLObjectPropertyExpression owlObjectPropertyExpression : subPropertyChain) {
+ renamedSubPropertyChain.add(expressionRenamer.rename(owlObjectPropertyExpression));
+ }
+ renamedAxiom = df.getOWLSubPropertyChainOfAxiom(subPropertyChain, superProperty);
}
@Override
@@ -360,6 +362,14 @@
@Override
public void visit(OWLHasKeyAxiom axiom) {
+ OWLClassExpression classExpression = axiom.getClassExpression();
+ classExpression = expressionRenamer.rename(classExpression);
+ Set<OWLPropertyExpression<?, ?>> propertyExpressions = axiom.getPropertyExpressions();
+ Set<OWLPropertyExpression<?, ?>> renamedPropertyExpressions = new HashSet<OWLPropertyExpression<?,?>>();
+ for (OWLPropertyExpression<?, ?> owlPropertyExpression : propertyExpressions) {
+ renamedPropertyExpressions.add(expressionRenamer.rename(owlPropertyExpression));
+ }
+ renamedAxiom = df.getOWLHasKeyAxiom(classExpression, renamedPropertyExpressions);
}
@Override
@@ -370,6 +380,23 @@
public void visit(SWRLRule axiom) {
}
-
+ @Override
+ public void visit(OWLAnnotationAssertionAxiom axiom) {
+ }
+ @Override
+ public void visit(OWLSubAnnotationPropertyOfAxiom axiom) {
+ }
+
+ @Override
+ public void visit(OWLAnnotationPropertyDomainAxiom axiom) {
+ }
+
+ @Override
+ public void visit(OWLAnnotationPropertyRangeAxiom axiom) {
+ }
+
+ @Override
+ public void visit(OWLDeclarationAxiom axiom) {
+ }
}
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
