From: <tc...@us...> - 2012-05-14 03:55:49
|
Revision: 3707 http://dl-learner.svn.sourceforge.net/dl-learner/?rev=3707&view=rev Author: tcanvn Date: 2012-05-14 03:55:41 +0000 (Mon, 14 May 2012) Log Message: ----------- Add learning configuration files for PADCEL algorithm for the following datasets: carcinogenesis, family benchmark (7 datasets), forte uncle, poker-straight, moral-simple, showering duration (new). Modified Paths: -------------- trunk/examples/forte/uncle_owl_large.conf Added Paths: ----------- trunk/examples/carcinogenesis/carcinogenesis_padcel.conf trunk/examples/family-benchmark/Aunt_padcel.conf trunk/examples/family-benchmark/Brother_padcel.conf trunk/examples/family-benchmark/Cousin_padcel.conf trunk/examples/family-benchmark/Daughter_padcel.conf trunk/examples/family-benchmark/Father_padcel.conf trunk/examples/family-benchmark/Grandson_padcel.conf trunk/examples/family-benchmark/Uncle_padcel.conf trunk/examples/forte/uncle_owl_large_padcel.conf trunk/examples/moral_reasoner/moral_all_examples_simple_owl_padcel.conf trunk/examples/poker/straight_owl_padcel.conf trunk/examples/showering-duration/ trunk/examples/showering-duration/abd.muse.massey.ac.nz.owl trunk/examples/showering-duration/uca1_150.owl trunk/examples/showering-duration/uca1_150_celoe.conf trunk/examples/showering-duration/uca1_150_padcel.conf trunk/examples/showering-duration/uca2_300.owl trunk/examples/showering-duration/uca2_300_celoe.conf trunk/examples/showering-duration/uca2_300_padcel.conf Added: trunk/examples/carcinogenesis/carcinogenesis_padcel.conf =================================================================== --- trunk/examples/carcinogenesis/carcinogenesis_padcel.conf (rev 0) +++ trunk/examples/carcinogenesis/carcinogenesis_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,381 @@ +/* +- CarcinoGennesis example +- Positive examples: 182, negative examples: 155 +- PDCCEL algorithm +- PDCCEL splitter + + @author An C. Tran +*/ + +prefixes = [ ("kb","http://dl-learner.org/carcinogenesis#") ] + + +/* run 10-fold cross validation */ +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + + +/* PDCCEL algorithm */ +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "15" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +/* use PDCCEL splitter for splitting datatype properties */ +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + + +/* knowledge source definition */ +ks.type = "OWL File" +ks.fileName = "carcinogenesis.owl" + +/* reasoner component */ +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +/* learning problem */ +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"kb:d1", +"kb:d10", +"kb:d101", +"kb:d102", +"kb:d103", +"kb:d106", +"kb:d107", +"kb:d108", +"kb:d11", +"kb:d12", +"kb:d13", +"kb:d134", +"kb:d135", +"kb:d136", +"kb:d138", +"kb:d140", +"kb:d141", +"kb:d144", +"kb:d145", +"kb:d146", +"kb:d147", +"kb:d15", +"kb:d17", +"kb:d19", +"kb:d192", +"kb:d193", +"kb:d195", +"kb:d196", +"kb:d197", +"kb:d198", +"kb:d199", +"kb:d2", +"kb:d20", +"kb:d200", +"kb:d201", +"kb:d202", +"kb:d203", +"kb:d204", +"kb:d205", +"kb:d21", +"kb:d22", +"kb:d226", +"kb:d227", +"kb:d228", +"kb:d229", +"kb:d231", +"kb:d232", +"kb:d234", +"kb:d236", +"kb:d239", +"kb:d23_2", +"kb:d242", +"kb:d245", +"kb:d247", +"kb:d249", +"kb:d25", +"kb:d252", +"kb:d253", +"kb:d254", +"kb:d255", +"kb:d26", +"kb:d272", +"kb:d275", +"kb:d277", +"kb:d279", +"kb:d28", +"kb:d281", +"kb:d283", +"kb:d284", +"kb:d288", +"kb:d29", +"kb:d290", +"kb:d291", +"kb:d292", +"kb:d30", +"kb:d31", +"kb:d32", +"kb:d33", +"kb:d34", +"kb:d35", +"kb:d36", +"kb:d37", +"kb:d38", +"kb:d42", +"kb:d43", +"kb:d44", +"kb:d45", +"kb:d46", +"kb:d47", +"kb:d48", +"kb:d49", +"kb:d5", +"kb:d51", +"kb:d52", +"kb:d53", +"kb:d55", +"kb:d58", +"kb:d6", +"kb:d7", +"kb:d84", +"kb:d85_2", +"kb:d86", +"kb:d87", +"kb:d88", +"kb:d89", +"kb:d9", +"kb:d91", +"kb:d92", +"kb:d93", +"kb:d95", +"kb:d96", +"kb:d98", +"kb:d99", +"kb:d100", +"kb:d104", +"kb:d105", +"kb:d109", +"kb:d137", +"kb:d139", +"kb:d14", +"kb:d142", +"kb:d143", +"kb:d148", +"kb:d16", +"kb:d18", +"kb:d191", +"kb:d206", +"kb:d230", +"kb:d233", +"kb:d235", +"kb:d237", +"kb:d238", +"kb:d23_1", +"kb:d24", +"kb:d240", +"kb:d241", +"kb:d243", +"kb:d244", +"kb:d246", +"kb:d248", +"kb:d250", +"kb:d251", +"kb:d27", +"kb:d273", +"kb:d274", +"kb:d278", +"kb:d286", +"kb:d289", +"kb:d3", +"kb:d39", +"kb:d4", +"kb:d40", +"kb:d41", +"kb:d50", +"kb:d54", +"kb:d56", +"kb:d57", +"kb:d8", +"kb:d85_1", +"kb:d90", +"kb:d94", +"kb:d97", +"kb:d296", +"kb:d305", +"kb:d306", +"kb:d307", +"kb:d308", +"kb:d311", +"kb:d314", +"kb:d315", +"kb:d316", +"kb:d320", +"kb:d322", +"kb:d323", +"kb:d325", +"kb:d329", +"kb:d330", +"kb:d331", +"kb:d332", +"kb:d333", +"kb:d336", +"kb:d337" +} +lp.negativeExamples = { +"kb:d110", +"kb:d111", +"kb:d114", +"kb:d116", +"kb:d117", +"kb:d119", +"kb:d121", +"kb:d123", +"kb:d124", +"kb:d125", +"kb:d127", +"kb:d128", +"kb:d130", +"kb:d133", +"kb:d150", +"kb:d151", +"kb:d154", +"kb:d155", +"kb:d156", +"kb:d159", +"kb:d160", +"kb:d161", +"kb:d162", +"kb:d163", +"kb:d164", +"kb:d165", +"kb:d166", +"kb:d169", +"kb:d170", +"kb:d171", +"kb:d172", +"kb:d173", +"kb:d174", +"kb:d178", +"kb:d179", +"kb:d180", +"kb:d181", +"kb:d183", +"kb:d184", +"kb:d185", +"kb:d186", +"kb:d188", +"kb:d190", +"kb:d194", +"kb:d207", +"kb:d208_1", +"kb:d209", +"kb:d210", +"kb:d211", +"kb:d212", +"kb:d213", +"kb:d214", +"kb:d215", +"kb:d217", +"kb:d218", +"kb:d219", +"kb:d220", +"kb:d224", +"kb:d256", +"kb:d257", +"kb:d258", +"kb:d261", +"kb:d262", +"kb:d263", +"kb:d264", +"kb:d265", +"kb:d266", +"kb:d267", +"kb:d269", +"kb:d271", +"kb:d276", +"kb:d280", +"kb:d285", +"kb:d287", +"kb:d293", +"kb:d294", +"kb:d59", +"kb:d60", +"kb:d61", +"kb:d63", +"kb:d64", +"kb:d65", +"kb:d69", +"kb:d70", +"kb:d71", +"kb:d72", +"kb:d73", +"kb:d74", +"kb:d75", +"kb:d76", +"kb:d77", +"kb:d78", +"kb:d79", +"kb:d80", +"kb:d81", +"kb:d82", +"kb:d112", +"kb:d113", +"kb:d115", +"kb:d118", +"kb:d120", +"kb:d122", +"kb:d126", +"kb:d129", +"kb:d131", +"kb:d132", +"kb:d149", +"kb:d152", +"kb:d153", +"kb:d157", +"kb:d158", +"kb:d167", +"kb:d168", +"kb:d175", +"kb:d176", +"kb:d177", +"kb:d182", +"kb:d187", +"kb:d189", +"kb:d208_2", +"kb:d216", +"kb:d221", +"kb:d222", +"kb:d223", +"kb:d225", +"kb:d259", +"kb:d260", +"kb:d268", +"kb:d270", +"kb:d282", +"kb:d295", +"kb:d62", +"kb:d66", +"kb:d67", +"kb:d68", +"kb:d83", +"kb:d297", +"kb:d298", +"kb:d299", +"kb:d300", +"kb:d302", +"kb:d303", +"kb:d304", +"kb:d309", +"kb:d312", +"kb:d313", +"kb:d317", +"kb:d318", +"kb:d319", +"kb:d324", +"kb:d326", +"kb:d327", +"kb:d328", +"kb:d334", +"kb:d335" +} Added: trunk/examples/family-benchmark/Aunt_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Aunt_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Aunt_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,110 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F2F14" +,"http://www.benchmark.org/family#F2F12" +,"http://www.benchmark.org/family#F2F19" +,"http://www.benchmark.org/family#F2F26" +,"http://www.benchmark.org/family#F2F28" +,"http://www.benchmark.org/family#F2F36" +,"http://www.benchmark.org/family#F3F52" +,"http://www.benchmark.org/family#F3F53" +,"http://www.benchmark.org/family#F5F62" +,"http://www.benchmark.org/family#F6F72" +,"http://www.benchmark.org/family#F6F79" +,"http://www.benchmark.org/family#F6F77" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F6F91" +,"http://www.benchmark.org/family#F6F84" +,"http://www.benchmark.org/family#F6F96" +,"http://www.benchmark.org/family#F6F101" +,"http://www.benchmark.org/family#F6F93" +,"http://www.benchmark.org/family#F7F114" +,"http://www.benchmark.org/family#F7F106" +,"http://www.benchmark.org/family#F7F116" +,"http://www.benchmark.org/family#F7F119" +,"http://www.benchmark.org/family#F7F126" +,"http://www.benchmark.org/family#F7F121" +,"http://www.benchmark.org/family#F9F148" +,"http://www.benchmark.org/family#F9F150" +,"http://www.benchmark.org/family#F9F143" +,"http://www.benchmark.org/family#F9F152" +,"http://www.benchmark.org/family#F9F154" +,"http://www.benchmark.org/family#F9F141" +,"http://www.benchmark.org/family#F9F160" +,"http://www.benchmark.org/family#F9F163" +,"http://www.benchmark.org/family#F9F158" +,"http://www.benchmark.org/family#F9F168" +,"http://www.benchmark.org/family#F10F174" +,"http://www.benchmark.org/family#F10F179" +,"http://www.benchmark.org/family#F10F181" +,"http://www.benchmark.org/family#F10F192" +,"http://www.benchmark.org/family#F10F193" +,"http://www.benchmark.org/family#F10F186" +,"http://www.benchmark.org/family#F10F195" +} + +lp.negativeExamples = { +"http://www.benchmark.org/family#F6M99" +,"http://www.benchmark.org/family#F10F200" +,"http://www.benchmark.org/family#F9F156" +,"http://www.benchmark.org/family#F6M69" +,"http://www.benchmark.org/family#F2F15" +,"http://www.benchmark.org/family#F6M100" +,"http://www.benchmark.org/family#F8F133" +,"http://www.benchmark.org/family#F3F48" +,"http://www.benchmark.org/family#F2F30" +,"http://www.benchmark.org/family#F4F55" +,"http://www.benchmark.org/family#F6F74" +,"http://www.benchmark.org/family#F10M199" +,"http://www.benchmark.org/family#F7M104" +,"http://www.benchmark.org/family#F9M146" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F2F22" +,"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F9F169" +,"http://www.benchmark.org/family#F5F65" +,"http://www.benchmark.org/family#F6M81" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F7F129" +,"http://www.benchmark.org/family#F7M107" +,"http://www.benchmark.org/family#F10F189" +,"http://www.benchmark.org/family#F8F135" +,"http://www.benchmark.org/family#F8M136" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F9F164" +,"http://www.benchmark.org/family#F7F118" +,"http://www.benchmark.org/family#F2F10" +,"http://www.benchmark.org/family#F6F97" +,"http://www.benchmark.org/family#F7F111" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F4M59" +,"http://www.benchmark.org/family#F2M37" +,"http://www.benchmark.org/family#F1M1" +,"http://www.benchmark.org/family#F9M142" +,"http://www.benchmark.org/family#F4M57" +,"http://www.benchmark.org/family#F9M170" +,"http://www.benchmark.org/family#F5M66" +,"http://www.benchmark.org/family#F9F145" +} \ No newline at end of file Added: trunk/examples/family-benchmark/Brother_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Brother_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Brother_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,87 @@ +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F2M18" +,"http://www.benchmark.org/family#F2M11" +,"http://www.benchmark.org/family#F2M32" +,"http://www.benchmark.org/family#F3M44" +,"http://www.benchmark.org/family#F3M45" +,"http://www.benchmark.org/family#F5M64" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F6M81" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F6M100" +,"http://www.benchmark.org/family#F6M92" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F7M117" +,"http://www.benchmark.org/family#F7M115" +,"http://www.benchmark.org/family#F7M125" +,"http://www.benchmark.org/family#F7M123" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F9M153" +,"http://www.benchmark.org/family#F9M159" +,"http://www.benchmark.org/family#F9M166" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F9M157" +,"http://www.benchmark.org/family#F9M167" +,"http://www.benchmark.org/family#F10M173" +,"http://www.benchmark.org/family#F10M183" +,"http://www.benchmark.org/family#F10M184" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F10M199" +} + +lp.negativeExamples = { +"http://www.benchmark.org/family#F10M196" +,"http://www.benchmark.org/family#F1M8" +,"http://www.benchmark.org/family#F7F103" +,"http://www.benchmark.org/family#F3F41" +,"http://www.benchmark.org/family#F1M1" +,"http://www.benchmark.org/family#F9F164" +,"http://www.benchmark.org/family#F9M149" +,"http://www.benchmark.org/family#F9M147" +,"http://www.benchmark.org/family#F9F158" +,"http://www.benchmark.org/family#F2F12" +,"http://www.benchmark.org/family#F1F5" +,"http://www.benchmark.org/family#F6M88" +,"http://www.benchmark.org/family#F7M104" +,"http://www.benchmark.org/family#F7M109" +,"http://www.benchmark.org/family#F7M120" +,"http://www.benchmark.org/family#F6F83" +,"http://www.benchmark.org/family#F6M78" +,"http://www.benchmark.org/family#F3M47" +,"http://www.benchmark.org/family#F10F174" +,"http://www.benchmark.org/family#F6F76" +,"http://www.benchmark.org/family#F2F26" +,"http://www.benchmark.org/family#F6F89" +,"http://www.benchmark.org/family#F3M50" +,"http://www.benchmark.org/family#F3F42" +,"http://www.benchmark.org/family#F6F79" +,"http://www.benchmark.org/family#F10M194" +,"http://www.benchmark.org/family#F2F19" +,"http://www.benchmark.org/family#F2F24" +,"http://www.benchmark.org/family#F9F154" +,"http://www.benchmark.org/family#F4F58" +} Added: trunk/examples/family-benchmark/Cousin_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Cousin_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Cousin_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,171 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F2F14" +,"http://www.benchmark.org/family#F2F15" +,"http://www.benchmark.org/family#F2M16" +,"http://www.benchmark.org/family#F2M21" +,"http://www.benchmark.org/family#F2F22" +,"http://www.benchmark.org/family#F2F30" +,"http://www.benchmark.org/family#F2M31" +,"http://www.benchmark.org/family#F2F38" +,"http://www.benchmark.org/family#F2M39" +,"http://www.benchmark.org/family#F6M73" +,"http://www.benchmark.org/family#F6F74" +,"http://www.benchmark.org/family#F6F79" +,"http://www.benchmark.org/family#F6M80" +,"http://www.benchmark.org/family#F6M81" +,"http://www.benchmark.org/family#F6F82" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F6F87" +,"http://www.benchmark.org/family#F6M88" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F6F91" +,"http://www.benchmark.org/family#F6F94" +,"http://www.benchmark.org/family#F6M95" +,"http://www.benchmark.org/family#F6M100" +,"http://www.benchmark.org/family#F6F101" +,"http://www.benchmark.org/family#F7F108" +,"http://www.benchmark.org/family#F7M109" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F7F114" +,"http://www.benchmark.org/family#F7M117" +,"http://www.benchmark.org/family#F7F118" +,"http://www.benchmark.org/family#F7M123" +,"http://www.benchmark.org/family#F7F124" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F9F145" +,"http://www.benchmark.org/family#F9M146" +,"http://www.benchmark.org/family#F9F148" +,"http://www.benchmark.org/family#F9M149" +,"http://www.benchmark.org/family#F9F150" +,"http://www.benchmark.org/family#F9F143" +,"http://www.benchmark.org/family#F9M144" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F9F152" +,"http://www.benchmark.org/family#F9M155" +,"http://www.benchmark.org/family#F9F156" +,"http://www.benchmark.org/family#F9M153" +,"http://www.benchmark.org/family#F9F154" +,"http://www.benchmark.org/family#F9M161" +,"http://www.benchmark.org/family#F9M159" +,"http://www.benchmark.org/family#F9F160" +,"http://www.benchmark.org/family#F9F164" +,"http://www.benchmark.org/family#F9M165" +,"http://www.benchmark.org/family#F9M166" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F9F163" +,"http://www.benchmark.org/family#F9F169" +,"http://www.benchmark.org/family#F9M170" +,"http://www.benchmark.org/family#F10F175" +,"http://www.benchmark.org/family#F10M176" +,"http://www.benchmark.org/family#F10F177" +,"http://www.benchmark.org/family#F10M178" +,"http://www.benchmark.org/family#F10M183" +,"http://www.benchmark.org/family#F10M184" +,"http://www.benchmark.org/family#F10F185" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F10F189" +,"http://www.benchmark.org/family#F10F192" +,"http://www.benchmark.org/family#F10F193" +,"http://www.benchmark.org/family#F10M194" +,"http://www.benchmark.org/family#F10M197" +,"http://www.benchmark.org/family#F10F198" +} + + +lp.negativeExamples = { +"http://www.benchmark.org/family#F7M128" +,"http://www.benchmark.org/family#F7F111" +,"http://www.benchmark.org/family#F8M132" +,"http://www.benchmark.org/family#F6F97" +,"http://www.benchmark.org/family#F9F140" +,"http://www.benchmark.org/family#F2M23" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F7M130" +,"http://www.benchmark.org/family#F4F58" +,"http://www.benchmark.org/family#F6M75" +,"http://www.benchmark.org/family#F2F12" +,"http://www.benchmark.org/family#F3F48" +,"http://www.benchmark.org/family#F5M63" +,"http://www.benchmark.org/family#F3M40" +,"http://www.benchmark.org/family#F7M107" +,"http://www.benchmark.org/family#F3F46" +,"http://www.benchmark.org/family#F10F179" +,"http://www.benchmark.org/family#F7F105" +,"http://www.benchmark.org/family#F10M187" +,"http://www.benchmark.org/family#F3M50" +,"http://www.benchmark.org/family#F3M51" +,"http://www.benchmark.org/family#F7F119" +,"http://www.benchmark.org/family#F2F33" +,"http://www.benchmark.org/family#F9M142" +,"http://www.benchmark.org/family#F10M173" +,"http://www.benchmark.org/family#F4M57" +,"http://www.benchmark.org/family#F9F168" +,"http://www.benchmark.org/family#F5M68" +,"http://www.benchmark.org/family#F8M134" +,"http://www.benchmark.org/family#F2M9" +,"http://www.benchmark.org/family#F5F67" +,"http://www.benchmark.org/family#F2M29" +,"http://www.benchmark.org/family#F8F133" +,"http://www.benchmark.org/family#F9M147" +,"http://www.benchmark.org/family#F5M60" +,"http://www.benchmark.org/family#F2M27" +,"http://www.benchmark.org/family#F7M115" +,"http://www.benchmark.org/family#F2M25" +,"http://www.benchmark.org/family#F1M6" +,"http://www.benchmark.org/family#F2M11" +,"http://www.benchmark.org/family#F7M120" +,"http://www.benchmark.org/family#F4F56" +,"http://www.benchmark.org/family#F2M34" +,"http://www.benchmark.org/family#F2F26" +,"http://www.benchmark.org/family#F6F93" +,"http://www.benchmark.org/family#F1F2" +,"http://www.benchmark.org/family#F2F24" +,"http://www.benchmark.org/family#F3F53" +,"http://www.benchmark.org/family#F7F129" +,"http://www.benchmark.org/family#F8M136" +,"http://www.benchmark.org/family#F3F52" +,"http://www.benchmark.org/family#F4M54" +,"http://www.benchmark.org/family#F3M45" +,"http://www.benchmark.org/family#F3F42" +,"http://www.benchmark.org/family#F8M138" +,"http://www.benchmark.org/family#F10F195" +,"http://www.benchmark.org/family#F1F7" +,"http://www.benchmark.org/family#F10M190" +,"http://www.benchmark.org/family#F3F41" +,"http://www.benchmark.org/family#F2M35" +,"http://www.benchmark.org/family#F2F10" +,"http://www.benchmark.org/family#F6F96" +,"http://www.benchmark.org/family#F3F49" +,"http://www.benchmark.org/family#F6M85" +,"http://www.benchmark.org/family#F3M47" +,"http://www.benchmark.org/family#F5F65" +,"http://www.benchmark.org/family#F8F137" +,"http://www.benchmark.org/family#F10M196" +,"http://www.benchmark.org/family#F10M180" +,"http://www.benchmark.org/family#F7F116" +,"http://www.benchmark.org/family#F6F70" +} \ No newline at end of file Added: trunk/examples/family-benchmark/Daughter_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Daughter_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Daughter_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,133 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F1F5" +,"http://www.benchmark.org/family#F1F7" +,"http://www.benchmark.org/family#F1F3" +,"http://www.benchmark.org/family#F2F17" +,"http://www.benchmark.org/family#F2F15" +,"http://www.benchmark.org/family#F2F19" +,"http://www.benchmark.org/family#F2F26" +,"http://www.benchmark.org/family#F2F33" +,"http://www.benchmark.org/family#F2F30" +,"http://www.benchmark.org/family#F2F28" +,"http://www.benchmark.org/family#F2F38" +,"http://www.benchmark.org/family#F2F36" +,"http://www.benchmark.org/family#F3F49" +,"http://www.benchmark.org/family#F3F52" +,"http://www.benchmark.org/family#F3F53" +,"http://www.benchmark.org/family#F3F42" +,"http://www.benchmark.org/family#F4F58" +,"http://www.benchmark.org/family#F4F56" +,"http://www.benchmark.org/family#F5F62" +,"http://www.benchmark.org/family#F6F79" +,"http://www.benchmark.org/family#F6F83" +,"http://www.benchmark.org/family#F6F77" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F6F89" +,"http://www.benchmark.org/family#F6F87" +,"http://www.benchmark.org/family#F6F84" +,"http://www.benchmark.org/family#F6F96" +,"http://www.benchmark.org/family#F6F97" +,"http://www.benchmark.org/family#F6F94" +,"http://www.benchmark.org/family#F7F108" +,"http://www.benchmark.org/family#F7F106" +,"http://www.benchmark.org/family#F7F118" +,"http://www.benchmark.org/family#F7F119" +,"http://www.benchmark.org/family#F7F129" +,"http://www.benchmark.org/family#F7F127" +,"http://www.benchmark.org/family#F7F121" +,"http://www.benchmark.org/family#F9F145" +,"http://www.benchmark.org/family#F9F148" +,"http://www.benchmark.org/family#F9F150" +,"http://www.benchmark.org/family#F9F143" +,"http://www.benchmark.org/family#F9F141" +,"http://www.benchmark.org/family#F9F164" +,"http://www.benchmark.org/family#F9F169" +,"http://www.benchmark.org/family#F10F175" +,"http://www.benchmark.org/family#F10F177" +,"http://www.benchmark.org/family#F10F179" +,"http://www.benchmark.org/family#F10F181" +,"http://www.benchmark.org/family#F10F192" +,"http://www.benchmark.org/family#F10F193" +,"http://www.benchmark.org/family#F10F186" +,"http://www.benchmark.org/family#F10F201" +,"http://www.benchmark.org/family#F10F195" +} + + +lp.negativeExamples = { +"http://www.benchmark.org/family#F7M123" +,"http://www.benchmark.org/family#F6M80" +,"http://www.benchmark.org/family#F2M37" +,"http://www.benchmark.org/family#F9M167" +,"http://www.benchmark.org/family#F10F189" +,"http://www.benchmark.org/family#F5M64" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F2M39" +,"http://www.benchmark.org/family#F3M43" +,"http://www.benchmark.org/family#F7M117" +,"http://www.benchmark.org/family#F2M32" +,"http://www.benchmark.org/family#F7F114" +,"http://www.benchmark.org/family#F10M190" +,"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F6M73" +,"http://www.benchmark.org/family#F3M44" +,"http://www.benchmark.org/family#F6M95" +,"http://www.benchmark.org/family#F9F163" +,"http://www.benchmark.org/family#F10F198" +,"http://www.benchmark.org/family#F2M25" +,"http://www.benchmark.org/family#F2M18" +,"http://www.benchmark.org/family#F8M132" +,"http://www.benchmark.org/family#F1M1" +,"http://www.benchmark.org/family#F6F76" +,"http://www.benchmark.org/family#F10M184" +,"http://www.benchmark.org/family#F3F41" +,"http://www.benchmark.org/family#F7M107" +,"http://www.benchmark.org/family#F9F160" +,"http://www.benchmark.org/family#F2M9" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F8F133" +,"http://www.benchmark.org/family#F1M6" +,"http://www.benchmark.org/family#F10M176" +,"http://www.benchmark.org/family#F4F55" +,"http://www.benchmark.org/family#F9M157" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F6M98" +,"http://www.benchmark.org/family#F4M54" +,"http://www.benchmark.org/family#F9M170" +,"http://www.benchmark.org/family#F6F70" +,"http://www.benchmark.org/family#F10M171" +,"http://www.benchmark.org/family#F10M199" +,"http://www.benchmark.org/family#F8M136" +,"http://www.benchmark.org/family#F4M59" +,"http://www.benchmark.org/family#F6M88" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F10M197" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F9M149" +,"http://www.benchmark.org/family#F7M109" +,"http://www.benchmark.org/family#F10M202" +} \ No newline at end of file Added: trunk/examples/family-benchmark/Father_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Father_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Father_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,148 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F1M4" +,"http://www.benchmark.org/family#F1M1" +,"http://www.benchmark.org/family#F2M16" +,"http://www.benchmark.org/family#F2M11" +,"http://www.benchmark.org/family#F2M23" +,"http://www.benchmark.org/family#F2M21" +,"http://www.benchmark.org/family#F2M20" +,"http://www.benchmark.org/family#F2M34" +,"http://www.benchmark.org/family#F2M31" +,"http://www.benchmark.org/family#F2M29" +,"http://www.benchmark.org/family#F2M37" +,"http://www.benchmark.org/family#F2M9" +,"http://www.benchmark.org/family#F3M50" +,"http://www.benchmark.org/family#F3M47" +,"http://www.benchmark.org/family#F3M45" +,"http://www.benchmark.org/family#F3M43" +,"http://www.benchmark.org/family#F3M40" +,"http://www.benchmark.org/family#F4M57" +,"http://www.benchmark.org/family#F4M54" +,"http://www.benchmark.org/family#F5M66" +,"http://www.benchmark.org/family#F5M64" +,"http://www.benchmark.org/family#F5M60" +,"http://www.benchmark.org/family#F6M73" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F6M81" +,"http://www.benchmark.org/family#F6M78" +,"http://www.benchmark.org/family#F6M88" +,"http://www.benchmark.org/family#F6M85" +,"http://www.benchmark.org/family#F6M98" +,"http://www.benchmark.org/family#F6M95" +,"http://www.benchmark.org/family#F6M92" +,"http://www.benchmark.org/family#F6M69" +,"http://www.benchmark.org/family#F7M110" +,"http://www.benchmark.org/family#F7M109" +,"http://www.benchmark.org/family#F7M107" +,"http://www.benchmark.org/family#F7M115" +,"http://www.benchmark.org/family#F7M128" +,"http://www.benchmark.org/family#F7M123" +,"http://www.benchmark.org/family#F7M122" +,"http://www.benchmark.org/family#F7M104" +,"http://www.benchmark.org/family#F7M102" +,"http://www.benchmark.org/family#F8M136" +,"http://www.benchmark.org/family#F8M134" +,"http://www.benchmark.org/family#F8M132" +,"http://www.benchmark.org/family#F9M146" +,"http://www.benchmark.org/family#F9M144" +,"http://www.benchmark.org/family#F9M153" +,"http://www.benchmark.org/family#F9M142" +,"http://www.benchmark.org/family#F9M159" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F9M157" +,"http://www.benchmark.org/family#F9M167" +,"http://www.benchmark.org/family#F9M139" +,"http://www.benchmark.org/family#F10M173" +,"http://www.benchmark.org/family#F10M182" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F10M187" +,"http://www.benchmark.org/family#F10M197" +,"http://www.benchmark.org/family#F10M196" +,"http://www.benchmark.org/family#F10M171" +} + +lp.negativeExamples = { +"http://www.benchmark.org/family#F5M63" +,"http://www.benchmark.org/family#F10M199" +,"http://www.benchmark.org/family#F10M176" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F9M161" +,"http://www.benchmark.org/family#F3F53" +,"http://www.benchmark.org/family#F10F195" +,"http://www.benchmark.org/family#F5F61" +,"http://www.benchmark.org/family#F7F103" +,"http://www.benchmark.org/family#F6F77" +,"http://www.benchmark.org/family#F9F156" +,"http://www.benchmark.org/family#F9M155" +,"http://www.benchmark.org/family#F6F70" +,"http://www.benchmark.org/family#F3F46" +,"http://www.benchmark.org/family#F6F79" +,"http://www.benchmark.org/family#F2M27" +,"http://www.benchmark.org/family#F7F108" +,"http://www.benchmark.org/family#F10F189" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F7F111" +,"http://www.benchmark.org/family#F10M190" +,"http://www.benchmark.org/family#F8M138" +,"http://www.benchmark.org/family#F9M165" +,"http://www.benchmark.org/family#F3M44" +,"http://www.benchmark.org/family#F9F160" +,"http://www.benchmark.org/family#F6F74" +,"http://www.benchmark.org/family#F10F198" +,"http://www.benchmark.org/family#F5F62" +,"http://www.benchmark.org/family#F10F175" +,"http://www.benchmark.org/family#F10F201" +,"http://www.benchmark.org/family#F6F89" +,"http://www.benchmark.org/family#F9F143" +,"http://www.benchmark.org/family#F9M170" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F9M149" +,"http://www.benchmark.org/family#F3F52" +,"http://www.benchmark.org/family#F10F181" +,"http://www.benchmark.org/family#F9F163" +,"http://www.benchmark.org/family#F9F169" +,"http://www.benchmark.org/family#F9F158" +,"http://www.benchmark.org/family#F10F179" +,"http://www.benchmark.org/family#F4F55" +,"http://www.benchmark.org/family#F2F15" +,"http://www.benchmark.org/family#F5M68" +,"http://www.benchmark.org/family#F6F93" +,"http://www.benchmark.org/family#F10F192" +,"http://www.benchmark.org/family#F7M120" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F8F133" +,"http://www.benchmark.org/family#F7M125" +,"http://www.benchmark.org/family#F7M130" +,"http://www.benchmark.org/family#F2M18" +,"http://www.benchmark.org/family#F10F191" +,"http://www.benchmark.org/family#F9F152" +,"http://www.benchmark.org/family#F9F154" +,"http://www.benchmark.org/family#F2F22" +,"http://www.benchmark.org/family#F6F97" +,"http://www.benchmark.org/family#F7F127" +,"http://www.benchmark.org/family#F2F36" +,"http://www.benchmark.org/family#F5F67" +} \ No newline at end of file Added: trunk/examples/family-benchmark/Grandson_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Grandson_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Grandson_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,114 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F2M18" +,"http://www.benchmark.org/family#F2M25" +,"http://www.benchmark.org/family#F2M23" +,"http://www.benchmark.org/family#F2M21" +,"http://www.benchmark.org/family#F2M32" +,"http://www.benchmark.org/family#F2M35" +,"http://www.benchmark.org/family#F3M44" +,"http://www.benchmark.org/family#F3M51" +,"http://www.benchmark.org/family#F3M47" +,"http://www.benchmark.org/family#F3M45" +,"http://www.benchmark.org/family#F5M68" +,"http://www.benchmark.org/family#F5M66" +,"http://www.benchmark.org/family#F6M75" +,"http://www.benchmark.org/family#F6M73" +,"http://www.benchmark.org/family#F6M81" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F6M99" +,"http://www.benchmark.org/family#F6M100" +,"http://www.benchmark.org/family#F7M112" +,"http://www.benchmark.org/family#F7M110" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F7M117" +,"http://www.benchmark.org/family#F7M115" +,"http://www.benchmark.org/family#F7M125" +,"http://www.benchmark.org/family#F7M123" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F8M138" +,"http://www.benchmark.org/family#F8M136" +,"http://www.benchmark.org/family#F9M147" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F9M155" +,"http://www.benchmark.org/family#F9M153" +,"http://www.benchmark.org/family#F9M161" +,"http://www.benchmark.org/family#F9M159" +,"http://www.benchmark.org/family#F9M166" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F10M183" +,"http://www.benchmark.org/family#F10M184" +,"http://www.benchmark.org/family#F10M190" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F10M199" +,"http://www.benchmark.org/family#F10M197" +} + +lp.negativeExamples = { +"http://www.benchmark.org/family#F6F83" +,"http://www.benchmark.org/family#F4M57" +,"http://www.benchmark.org/family#F1M8" +,"http://www.benchmark.org/family#F9F140" +,"http://www.benchmark.org/family#F4F58" +,"http://www.benchmark.org/family#F2M29" +,"http://www.benchmark.org/family#F9M170" +,"http://www.benchmark.org/family#F7F118" +,"http://www.benchmark.org/family#F2F19" +,"http://www.benchmark.org/family#F2M16" +,"http://www.benchmark.org/family#F2M34" +,"http://www.benchmark.org/family#F10M182" +,"http://www.benchmark.org/family#F7M120" +,"http://www.benchmark.org/family#F8M134" +,"http://www.benchmark.org/family#F6F74" +,"http://www.benchmark.org/family#F10F192" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F2F28" +,"http://www.benchmark.org/family#F9M139" +,"http://www.benchmark.org/family#F10M194" +,"http://www.benchmark.org/family#F1F5" +,"http://www.benchmark.org/family#F4F56" +,"http://www.benchmark.org/family#F6F89" +,"http://www.benchmark.org/family#F2F33" +,"http://www.benchmark.org/family#F10F174" +,"http://www.benchmark.org/family#F7M128" +,"http://www.benchmark.org/family#F7F129" +,"http://www.benchmark.org/family#F9F158" +,"http://www.benchmark.org/family#F3M50" +,"http://www.benchmark.org/family#F6F94" +,"http://www.benchmark.org/family#F7F114" +,"http://www.benchmark.org/family#F6F72" +,"http://www.benchmark.org/family#F7F124" +,"http://www.benchmark.org/family#F9F150" +,"http://www.benchmark.org/family#F4F55" +,"http://www.benchmark.org/family#F10F175" +,"http://www.benchmark.org/family#F1F7" +,"http://www.benchmark.org/family#F4M54" +,"http://www.benchmark.org/family#F7F108" +,"http://www.benchmark.org/family#F6M92" +,"http://www.benchmark.org/family#F9F152" +,"http://www.benchmark.org/family#F6M85" +,"http://www.benchmark.org/family#F2F36" +} Added: trunk/examples/family-benchmark/Uncle_padcel.conf =================================================================== --- trunk/examples/family-benchmark/Uncle_padcel.conf (rev 0) +++ trunk/examples/family-benchmark/Uncle_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,104 @@ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + +ks.type = "OWL File" +ks.fileName = "family-benchmark.owl" + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "120" +alg.maxNoOfSplits = "40" +alg.splitter = splitter + +splitter.type = "org.dllearner.algorithms.PADCEL.split.PADCELDoubleSplitterV1" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"http://www.benchmark.org/family#F2M13" +,"http://www.benchmark.org/family#F2M11" +,"http://www.benchmark.org/family#F2M20" +,"http://www.benchmark.org/family#F2M27" +,"http://www.benchmark.org/family#F2M32" +,"http://www.benchmark.org/family#F2M29" +,"http://www.benchmark.org/family#F2M37" +,"http://www.benchmark.org/family#F3M44" +,"http://www.benchmark.org/family#F5M63" +,"http://www.benchmark.org/family#F6M71" +,"http://www.benchmark.org/family#F6M80" +,"http://www.benchmark.org/family#F6M78" +,"http://www.benchmark.org/family#F6M90" +,"http://www.benchmark.org/family#F6M85" +,"http://www.benchmark.org/family#F6M100" +,"http://www.benchmark.org/family#F6M92" +,"http://www.benchmark.org/family#F7M113" +,"http://www.benchmark.org/family#F7M107" +,"http://www.benchmark.org/family#F7M115" +,"http://www.benchmark.org/family#F7M120" +,"http://www.benchmark.org/family#F7M125" +,"http://www.benchmark.org/family#F7M131" +,"http://www.benchmark.org/family#F7M122" +,"http://www.benchmark.org/family#F9M149" +,"http://www.benchmark.org/family#F9M144" +,"http://www.benchmark.org/family#F9M151" +,"http://www.benchmark.org/family#F9M153" +,"http://www.benchmark.org/family#F9M142" +,"http://www.benchmark.org/family#F9M159" +,"http://www.benchmark.org/family#F9M162" +,"http://www.benchmark.org/family#F9M157" +,"http://www.benchmark.org/family#F9M167" +,"http://www.benchmark.org/family#F10M173" +,"http://www.benchmark.org/family#F10M180" +,"http://www.benchmark.org/family#F10M182" +,"http://www.benchmark.org/family#F10M194" +,"http://www.benchmark.org/family#F10M187" +,"http://www.benchmark.org/family#F10M196" +} + +lp.negativeExamples = { +"http://www.benchmark.org/family#F10F198" +,"http://www.benchmark.org/family#F7F108" +,"http://www.benchmark.org/family#F9M165" +,"http://www.benchmark.org/family#F6F82" +,"http://www.benchmark.org/family#F9F148" +,"http://www.benchmark.org/family#F3M43" +,"http://www.benchmark.org/family#F7F103" +,"http://www.benchmark.org/family#F10M188" +,"http://www.benchmark.org/family#F1F3" +,"http://www.benchmark.org/family#F9F156" +,"http://www.benchmark.org/family#F9M147" +,"http://www.benchmark.org/family#F10F191" +,"http://www.benchmark.org/family#F9F160" +,"http://www.benchmark.org/family#F6M95" +,"http://www.benchmark.org/family#F2F14" +,"http://www.benchmark.org/family#F6F94" +,"http://www.benchmark.org/family#F1F2" +,"http://www.benchmark.org/family#F6F86" +,"http://www.benchmark.org/family#F10F174" +,"http://www.benchmark.org/family#F2F12" +,"http://www.benchmark.org/family#F2F28" +,"http://www.benchmark.org/family#F5M60" +,"http://www.benchmark.org/family#F8M134" +,"http://www.benchmark.org/family#F7M117" +,"http://www.benchmark.org/family#F10F189" +,"http://www.benchmark.org/family#F4F55" +,"http://www.benchmark.org/family#F6F76" +,"http://www.benchmark.org/family#F7F119" +,"http://www.benchmark.org/family#F2F36" +,"http://www.benchmark.org/family#F2M9" +,"http://www.benchmark.org/family#F2F38" +,"http://www.benchmark.org/family#F2F22" +,"http://www.benchmark.org/family#F6F89" +,"http://www.benchmark.org/family#F5M64" +,"http://www.benchmark.org/family#F5F67" +,"http://www.benchmark.org/family#F3F53" +,"http://www.benchmark.org/family#F2F26" +,"http://www.benchmark.org/family#F5F65" +} \ No newline at end of file Modified: trunk/examples/forte/uncle_owl_large.conf =================================================================== --- trunk/examples/forte/uncle_owl_large.conf 2012-05-13 17:14:12 UTC (rev 3706) +++ trunk/examples/forte/uncle_owl_large.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -9,6 +9,11 @@ prefixes = [ ("kb","http://localhost/foo#") ] +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + // knowledge source definition ks.type = "OWL File" ks.fileName = "forte_family.owl" Added: trunk/examples/forte/uncle_owl_large_padcel.conf =================================================================== --- trunk/examples/forte/uncle_owl_large_padcel.conf (rev 0) +++ trunk/examples/forte/uncle_owl_large_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,124 @@ +/** + * See uncle.conf. This is the same learning problem, but loading background + * knowledge from an OWL file instead. + * + * Copyright (C) 2007, Jens Lehmann + * Modified by An C. Tran + */ + + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + + +/** background knowledge **/ +prefixes = [ ("kb","http://localhost/foo#") ] + +// knowledge source definition +ks.type = "OWL File" +ks.fileName = "forte_family.owl" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + + +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "300" + + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"kb:art", +"kb:calvin", +"kb:carlos", +"kb:david", +"kb:eric", +"kb:fred", +"kb:frederick", +"kb:george", +"kb:harry", +"kb:jack", +"kb:james", +"kb:jonas", +"kb:karl", +"kb:leon", +"kb:mark", +"kb:melvin", +"kb:neil", +"kb:nero", +"kb:owen", +"kb:paul", +"kb:peter", +"kb:umo", +"kb:walt" +} +lp.negativeExamples = { +"kb:alfred", +"kb:alice", +"kb:angela", +"kb:ann", +"kb:beatrice", +"kb:bob", +"kb:callie", +"kb:carl", +"kb:christy", +"kb:cornelia", +"kb:deanna", +"kb:elisa", +"kb:f12", +"kb:f14", +"kb:f19", +"kb:f2", +"kb:f20", +"kb:f21", +"kb:f22", +"kb:f23", +"kb:f25", +"kb:f26", +"kb:f28", +"kb:f8", +"kb:fannie", +"kb:gail", +"kb:helen", +"kb:jane", +"kb:janet", +"kb:kari", +"kb:lorrie", +"kb:m1", +"kb:m10", +"kb:m11", +"kb:m13", +"kb:m15", +"kb:m16", +"kb:m17", +"kb:m18", +"kb:m24", +"kb:m27", +"kb:m29", +"kb:m3", +"kb:m4", +"kb:m5", +"kb:m6", +"kb:m7", +"kb:m9", +"kb:maria", +"kb:martha", +"kb:nancy", +"kb:nonnie", +"kb:oma", +"kb:paula", +"kb:prissie", +"kb:rachel", +"kb:ray", +"kb:regina", +"kb:steve", +"kb:susan", +"kb:terri", +"kb:terry", +"kb:wendy" +} Added: trunk/examples/moral_reasoner/moral_all_examples_simple_owl_padcel.conf =================================================================== --- trunk/examples/moral_reasoner/moral_all_examples_simple_owl_padcel.conf (rev 0) +++ trunk/examples/moral_reasoner/moral_all_examples_simple_owl_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,241 @@ + /*********************** + solution should be: + guilty = (blameworthy OR vicarious_blame ). + + + Examples: + 102 positive + 100 negative + + ***********************/ +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + + +prefixes = [ ("kb","http://localhost/foo#") ] + +// knowledge source definition +ks.type = "OWL file" +ks.fileName = "moral.owl" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + +alg.numberOfWorkers = "8" +alg.maxExecutionTimeInSeconds = "300" +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" +alg.ignoredConcepts = {"kb:guilty"} + + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"kb:p0", +"kb:p1", +"kb:p2", +"kb:p3", +"kb:p4", +"kb:p5", +"kb:p6", +"kb:p7", +"kb:p8", +"kb:p9", +"kb:p10", +"kb:p11", +"kb:p12", +"kb:p13", +"kb:p14", +"kb:p15", +"kb:p16", +"kb:p17", +"kb:p18", +"kb:p19", +"kb:p20", +"kb:p21", +"kb:p22", +"kb:p23", +"kb:p24", +"kb:p25", +"kb:p26", +"kb:p27", +"kb:p28", +"kb:p29", +"kb:p30", +"kb:p31", +"kb:p32", +"kb:p33", +"kb:p34", +"kb:p35", +"kb:p36", +"kb:p37", +"kb:p38", +"kb:p39", +"kb:p40", +"kb:p41", +"kb:p42", +"kb:p43", +"kb:p44", +"kb:p45", +"kb:p46", +"kb:p47", +"kb:p48", +"kb:p49", +"kb:p50", +"kb:p51", +"kb:p52", +"kb:p53", +"kb:p54", +"kb:p55", +"kb:p56", +"kb:p57", +"kb:p58", +"kb:p59", +"kb:p60", +"kb:p61", +"kb:p62", +"kb:p63", +"kb:p64", +"kb:p65", +"kb:p66", +"kb:p67", +"kb:p68", +"kb:p69", +"kb:p70", +"kb:p71", +"kb:p72", +"kb:p73", +"kb:p74", +"kb:p75", +"kb:p76", +"kb:p77", +"kb:p78", +"kb:p79", +"kb:p80", +"kb:p81", +"kb:p82", +"kb:p83", +"kb:p84", +"kb:p85", +"kb:p86", +"kb:p87", +"kb:p88", +"kb:p89", +"kb:p90", +"kb:p91", +"kb:p92", +"kb:p93", +"kb:p94", +"kb:p95", +"kb:p96", +"kb:p97", +"kb:p98", +"kb:p99", +"kb:p100", +"kb:p101" +} +lp.negativeExamples = { +"kb:n0", +"kb:n1", +"kb:n2", +"kb:n3", +"kb:n4", +"kb:n5", +"kb:n6", +"kb:n7", +"kb:n8", +"kb:n9", +"kb:n10", +"kb:n11", +"kb:n12", +"kb:n13", +"kb:n14", +"kb:n15", +"kb:n16", +"kb:n17", +"kb:n18", +"kb:n19", +"kb:n20", +"kb:n21", +"kb:n22", +"kb:n23", +"kb:n24", +"kb:n25", +"kb:n26", +"kb:n27", +"kb:n28", +"kb:n29", +"kb:n30", +"kb:n31", +"kb:n32", +"kb:n33", +"kb:n34", +"kb:n35", +"kb:n36", +"kb:n37", +"kb:n38", +"kb:n39", +"kb:n40", +"kb:n41", +"kb:n42", +"kb:n43", +"kb:n44", +"kb:n45", +"kb:n46", +"kb:n47", +"kb:n48", +"kb:n49", +"kb:n50", +"kb:n51", +"kb:n52", +"kb:n53", +"kb:n54", +"kb:n55", +"kb:n56", +"kb:n57", +"kb:n58", +"kb:n59", +"kb:n60", +"kb:n61", +"kb:n62", +"kb:n63", +"kb:n64", +"kb:n65", +"kb:n66", +"kb:n67", +"kb:n68", +"kb:n69", +"kb:n70", +"kb:n71", +"kb:n72", +"kb:n73", +"kb:n74", +"kb:n75", +"kb:n76", +"kb:n77", +"kb:n78", +"kb:n79", +"kb:n80", +"kb:n81", +"kb:n82", +"kb:n83", +"kb:n84", +"kb:n85", +"kb:n86", +"kb:n87", +"kb:n88", +"kb:n89", +"kb:n90", +"kb:n91", +"kb:n92", +"kb:n93", +"kb:n94", +"kb:n95", +"kb:n96", +"kb:n97", +"kb:n98", +"kb:n99" +} + \ No newline at end of file Added: trunk/examples/poker/straight_owl_padcel.conf =================================================================== --- trunk/examples/poker/straight_owl_padcel.conf (rev 0) +++ trunk/examples/poker/straight_owl_padcel.conf 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,92 @@ +/** + * See straight.conf. This is the same learning problem, but loading + * background knowledge from an OWL file instead. + * + * Copyright (C) 2007, Jens Lehmann + * Modified: An C. Tran + */ + +cli.type = "org.dllearner.cli.CLI" +cli.writeSpringConfiguration = false +cli.performCrossValidation = true +cli.nrOfFolds = 10 + + + +prefixes = [ ("kb","http://localhost/foo#") ] + +// knowledge source definition +ks.type = "OWL File" +ks.fileName = "straight.owl" + +// reasoner +reasoner.type = "fast instance checker" +reasoner.sources = { ks } + + +alg.numberOfWorkers = "4" +alg.maxExecutionTimeInSeconds = "300" +alg.type = "org.dllearner.algorithms.PADCEL.PADCELearner" + +// learning problem +lp.type = "org.dllearner.algorithms.PADCEL.PADCELPosNegLP" +lp.positiveExamples = { +"kb:hand1", +"kb:hand22", +"kb:hand40", +"kb:hand44" +} + +lp.negativeExamples = { +"kb:hand0", +"kb:hand2", +"kb:hand3", +"kb:hand4", +"kb:hand5", +"kb:hand6", +"kb:hand7", +"kb:hand8", +"kb:hand9", +"kb:hand10", +"kb:hand11", +"kb:hand12", +"kb:hand13", +"kb:hand14", +"kb:hand15", +"kb:hand16", +"kb:hand17", +"kb:hand18", +"kb:hand19", +"kb:hand20", +"kb:hand21", +"kb:hand23", +"kb:hand24", +"kb:hand25", +"kb:hand26", +"kb:hand27", +"kb:hand28", +"kb:hand29", +"kb:hand30", +"kb:hand31", +"kb:hand32", +"kb:hand33", +"kb:hand34", +"kb:hand35", +"kb:hand36", +"kb:hand37", +"kb:hand38", +"kb:hand39", +"kb:hand41", +"kb:hand42", +"kb:hand43", +"kb:hand45", +"kb:hand46", +"kb:hand47", +"kb:hand48", +"kb:hand49", +"kb:hand50", +"kb:hand51", +"kb:hand52", +"kb:hand53", +"kb:hand54" +} Added: trunk/examples/showering-duration/abd.muse.massey.ac.nz.owl =================================================================== --- trunk/examples/showering-duration/abd.muse.massey.ac.nz.owl (rev 0) +++ trunk/examples/showering-duration/abd.muse.massey.ac.nz.owl 2012-05-14 03:55:41 UTC (rev 3707) @@ -0,0 +1,1228 @@ +<?xml version="1.0"?> + + +<!DOCTYPE rdf:RDF [ + <!ENTITY abd "http://abd.muse.massey.ac.nz#" > + <!ENTITY owl "http://www.w3.org/2002/07/owl#" > + <!ENTITY xsd "http://www.w3.org/2001/XMLSchema#" > + <!ENTITY owl2xml "http://www.w3.org/2006/12/owl2-xml#" > + <!ENTITY rdfs "http://www.w3.org/2000/01/rdf-schema#" > + <!ENTITY rdf "http://www.w3.org/1999/02/22-rdf-syntax-ns#" > +]> + + +<rdf:RDF xmlns="http://abd.muse.massey.ac.nz#" + xml:base="http://abd.muse.massey.ac.nz" + xmlns:owl2xml="http://www.w3.org/2006/12/owl2-xml#" + xmlns:abd="http://abd.muse.massey.ac.nz#" + xmlns:xsd="http://www.w3.org/2001/XMLSchema#" + xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" + xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" + xmlns:owl="http://www.w3.org/2002/07/owl#"> + <owl:Ontology rdf:about="http://abd.muse.massey.ac.nz"/> + + + + <!-- + /////////////////////////////////////////////////////////////////////////////////////// + // + // Annotation properties + // + /////////////////////////////////////////////////////////////////////////////////////// + --> + + + + + <!-- + /////////////////////////////////////////////////////////////////////////////////////// + // + // Datatypes + // + /////////////////////////////////////////////////////////////////////////////////////// + --> + + + + + <!-- + /////////////////////////////////////////////////////////////////////////////////////// + // + // Object Properties + // + /////////////////////////////////////////////////////////////////////////////////////// + --> + + + + + <!-- http://abd.muse.massey.ac.nz#activityHasDuration --> + + <owl:ObjectProperty rdf:about="&abd;activityHasDuration"> + <rdfs:domain rdf:resource="&abd;Activity"/> + <rdfs:range rdf:resource="&abd;Duration"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#activityHasOtherContext --> + + <owl:ObjectProperty rdf:about="&abd;activityHasOtherContext"> + <rdfs:domain rdf:resource="&abd;Activity"/> + <rdfs:range rdf:resource="&abd;OtherContext"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#activityHasStarttime --> + + <owl:ObjectProperty rdf:about="&abd;activityHasStarttime"> + <rdfs:domain rdf:resource="&abd;Activity"/> + <rdfs:range rdf:resource="&abd;Timepoint"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasTemperature --> + + <owl:ObjectProperty rdf:about="&abd;hasTemperature"> + <rdfs:range rdf:resource="&abd;Temperature"/> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#placedAt --> + + <owl:ObjectProperty rdf:about="&abd;placedAt"> + <rdfs:domain rdf:resource="&abd;Furniture"/> + <rdfs:range rdf:resource="&abd;Location"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#takeActivity --> + + <owl:ObjectProperty rdf:about="&abd;takeActivity"> + <rdfs:range rdf:resource="&abd;Activity"/> + <rdfs:domain rdf:resource="&abd;People"/> + </owl:ObjectProperty> + + + + <!-- http://abd.muse.massey.ac.nz#takenAt --> + + <owl:ObjectProperty rdf:about="&abd;takenAt"> + <rdfs:domain rdf:resource="&abd;Activity"/> + <rdfs:range rdf:resource="&abd;Location"/> + </owl:ObjectProperty> + + + + <!-- + /////////////////////////////////////////////////////////////////////////////////////// + // + // Data properties + // + /////////////////////////////////////////////////////////////////////////////////////// + --> + + + + + <!-- http://abd.muse.massey.ac.nz#hasDayValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasDayValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasDisturbedNightValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasDisturbedNightValue"> + <rdfs:domain rdf:resource="&abd;DisturbedNight"/> + <rdfs:range rdf:resource="&xsd;string"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasDurationValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasDurationValue"> + <rdf:type rdf:resource="&owl;FunctionalProperty"/> + <rdfs:domain rdf:resource="&abd;Duration"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasHourValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasHourValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasMinuteValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasMinuteValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasMonthValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasMonthValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasScheduledValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasScheduledValue"> + <rdfs:domain rdf:resource="&abd;Scheduled"/> + <rdfs:range rdf:resource="&xsd;string"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasSecondValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasSecondValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasTemperatureValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasTemperatureValue"> + <rdfs:domain rdf:resource="&abd;Temperature"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- http://abd.muse.massey.ac.nz#hasYearValue --> + + <owl:DatatypeProperty rdf:about="&abd;hasYearValue"> + <rdfs:domain rdf:resource="&abd;Timepoint"/> + <rdfs:range rdf:resource="&xsd;double"/> + </owl:DatatypeProperty> + + + + <!-- + /////////////////////////////////////////////////////////////////////////////////////// + // + // Classes + // + /////////////////////////////////////////////////////////////////////////////////////// + --> + + + + + <!-- http://abd.muse.massey.ac.nz#AbnormalActivity --> + + <owl:Class rdf:about="&abd;AbnormalActivity"> + <rdfs:subClassOf rdf:resource="&abd;Activity"/> + <owl:disjointWith rdf:resource="&abd;NormalActivity"/> + </owl:Class> + + + + <!-- http://abd.muse.massey.ac.nz#Activity --> + + <owl:Class rdf:about="&abd;Activity"/> + + + + <!-- http://abd.muse.massey.ac.nz#Afternoon --> + + <owl:Class rdf:about="&abd;Afternoon"> + <owl:equivalentClass> + <owl:Class> + <owl:intersectionOf rdf:parseType="Collection"> + <rdf:Description rdf:about="&abd;Timepoint"/> + <owl:Restriction> + <owl:onProperty rdf:resource="&abd;hasHourValue"/> + <owl:someValuesFrom> + <rdfs:Datatype> + <owl:onDatatype rdf:resource="&xsd;double"/> + <owl:withRestrictions rdf:parseType="Collection"> + <rdf:Description> + <xsd:minInclusive rdf:datatype="&xsd;double">12</xsd:minInclusive> + </rdf:Description> + </owl:withRestrictions> + </rdfs:Datatype> + </owl:someValuesFrom> + </owl:Restriction> + <owl:Restriction> + <owl:onProperty rdf:resource="&abd;hasHourValue"/> + <owl:someValuesFrom> + <rdfs:Datatype> + <owl:onDatatype rdf:resource="&xsd;double"/> + <owl:withRestrictions rdf:parseType="Collection"> + <rdf:Description> + <xsd:maxExclusive rdf:datatype="&xsd;double">18</xsd:maxExclusive> + </rdf:Description> + </owl:withRestrictions> + </rdfs:Datatype> + </owl:someValuesFrom> + </owl:Restriction> + </owl:intersectionOf> + </owl:Class> + </owl:equivalentClass> + <rdfs:subClassOf rdf:resource="&abd;QualitativeTimeOfDay"/> + </owl:Class> + + + + <!-- http://abd.muse.massey.ac.nz#Autumn --> + + <owl:Class rdf:about="&abd;Autumn"> + <owl:equivalentClass> + <owl:Class> + <owl:intersectionOf rdf:parseType="Collection"> + <rdf:Description rdf:about="&abd;Timepoint"/> + <owl:Restriction> + <owl:onProperty rdf:resource="&abd;hasMonthValue"/> + <owl:someValuesFrom> + <rdfs:Datatype> + ... 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