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[DL-Learner SVN] SF.net SVN: dl-learner:[3471] trunk/components-core/src/test/java/org/ dllearner/test/junit
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From: <lor...@us...> - 2011-12-05 09:42:22
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Revision: 3471
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=3471&view=rev
Author: lorenz_b
Date: 2011-12-05 09:42:14 +0000 (Mon, 05 Dec 2011)
Log Message:
-----------
Rewrote tests to work without ComponentManager.
Modified Paths:
--------------
trunk/components-core/src/test/java/org/dllearner/test/junit/ELDownTests.java
trunk/components-core/src/test/java/org/dllearner/test/junit/HeuristicTests.java
trunk/components-core/src/test/java/org/dllearner/test/junit/RefinementOperatorTests.java
trunk/components-core/src/test/java/org/dllearner/test/junit/TestOntologies.java
Modified: trunk/components-core/src/test/java/org/dllearner/test/junit/ELDownTests.java
===================================================================
--- trunk/components-core/src/test/java/org/dllearner/test/junit/ELDownTests.java 2011-12-05 09:15:13 UTC (rev 3470)
+++ trunk/components-core/src/test/java/org/dllearner/test/junit/ELDownTests.java 2011-12-05 09:42:14 UTC (rev 3471)
@@ -24,6 +24,7 @@
import java.io.File;
import java.io.IOException;
import java.net.MalformedURLException;
+import java.util.Collections;
import java.util.Set;
import java.util.SortedSet;
import java.util.TreeSet;
@@ -296,12 +297,10 @@
logger.removeAllAppenders();
logger.addAppender(app);
- ComponentManager cm = ComponentManager.getInstance();
- AbstractKnowledgeSource source = cm.knowledgeSource(OWLFile.class);
- String ont = "test/galen2.owl";
- cm.applyConfigEntry(source, "url", new File(ont).toURI().toURL());
+ String ont = "../test/galen2.owl";
+ AbstractKnowledgeSource source = new OWLFile(ont);
source.init();
- AbstractReasonerComponent reasoner = cm.reasoner(OWLAPIReasoner.class, source);
+ AbstractReasonerComponent reasoner = new OWLAPIReasoner(Collections.singleton(source));
reasoner.init();
System.out.println("Galen loaded.");
@@ -333,12 +332,10 @@
@Test
public void asTest() throws ComponentInitException, MalformedURLException {
- ComponentManager cm = ComponentManager.getInstance();
- AbstractKnowledgeSource source = cm.knowledgeSource(OWLFile.class);
- String ont = "test/galen2.owl";
- cm.applyConfigEntry(source, "url", new File(ont).toURI().toURL());
+ String ont = "../test/galen2.owl";
+ AbstractKnowledgeSource source = new OWLFile(ont);
source.init();
- AbstractReasonerComponent reasoner = cm.reasoner(OWLAPIReasoner.class, source);
+ AbstractReasonerComponent reasoner = new OWLAPIReasoner(Collections.singleton(source));
reasoner.init();
System.out.println("Galen loaded.");
Modified: trunk/components-core/src/test/java/org/dllearner/test/junit/HeuristicTests.java
===================================================================
--- trunk/components-core/src/test/java/org/dllearner/test/junit/HeuristicTests.java 2011-12-05 09:15:13 UTC (rev 3470)
+++ trunk/components-core/src/test/java/org/dllearner/test/junit/HeuristicTests.java 2011-12-05 09:42:14 UTC (rev 3471)
@@ -101,7 +101,6 @@
AbstractKnowledgeSource ks = new KBFile(kb);
AbstractReasonerComponent reasoner = cm.reasoner(OWLAPIReasoner.class, ks);
ClassLearningProblem problem = cm.learningProblem(ClassLearningProblem.class, reasoner);
- ks.init();
reasoner.init();
//// equivalent classes, no noise, no approximations ////
@@ -198,7 +197,6 @@
AbstractKnowledgeSource ks = new KBFile(kb);
AbstractReasonerComponent reasoner = cm.reasoner(OWLAPIReasoner.class, ks);
PosNegLPStandard problem = cm.learningProblem(PosNegLPStandard.class, reasoner);
- ks.init();
reasoner.init();
Individual[] pos1 = new Individual[] {ind[0], ind[1], ind[2], ind[3], ind[4]};
Modified: trunk/components-core/src/test/java/org/dllearner/test/junit/RefinementOperatorTests.java
===================================================================
--- trunk/components-core/src/test/java/org/dllearner/test/junit/RefinementOperatorTests.java 2011-12-05 09:15:13 UTC (rev 3470)
+++ trunk/components-core/src/test/java/org/dllearner/test/junit/RefinementOperatorTests.java 2011-12-05 09:42:14 UTC (rev 3471)
@@ -23,6 +23,7 @@
import java.io.File;
import java.net.MalformedURLException;
+import java.util.Collections;
import java.util.Set;
import java.util.TreeSet;
@@ -69,19 +70,11 @@
@Test
public void rhoDRDownTest() {
try {
- String file = "examples/carcinogenesis/carcinogenesis.owl";
- ComponentManager cm = ComponentManager.getInstance();
- AbstractKnowledgeSource ks = cm.knowledgeSource(OWLFile.class);
- try {
- cm.applyConfigEntry(ks, "url", new File(file).toURI().toURL());
- } catch (MalformedURLException e) {
- // should never happen
- e.printStackTrace();
- }
- ks.init();
- AbstractReasonerComponent rc = cm.reasoner(OWLAPIReasoner.class, ks);
- rc.init();
- baseURI = rc.getBaseURI();
+ String file = "../examples/carcinogenesis/carcinogenesis.owl";
+ AbstractKnowledgeSource ks = new OWLFile(file);
+ AbstractReasonerComponent reasoner = new OWLAPIReasoner(Collections.singleton(ks));
+ reasoner.init();
+ baseURI = reasoner.getBaseURI();
// ReasonerComponent rs = cm.reasoningService(rc);
// TODO the following two lines should not be necessary
@@ -89,7 +82,11 @@
// rs.prepareRoleHierarchy();
RhoDRDown op = new RhoDRDown();
- op.setReasoner(rc);
+ op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
Description concept = KBParser.parseConcept(uri("Compound"));
Set<Description> results = op.refine(concept, 4, null);
@@ -110,12 +107,18 @@
}
@Test
- public void rhoDRDownTest2() throws ParseException {
+ public void rhoDRDownTest2() throws ParseException, ComponentInitException {
AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.EPC_OE);
+ reasoner.init();
baseURI = reasoner.getBaseURI();
RhoDRDown op = new RhoDRDown();
op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
+
Description concept = KBParser.parseConcept("(\"http://localhost/aris/sap_model.owl#EPC\" AND EXISTS \"http://localhost/aris/sap_model.owl#hasModelElements\".\"http://localhost/aris/sap_model.owl#Object\")");
Set<Description> results = op.refine(concept,10);
@@ -131,7 +134,7 @@
}
@Test
- public void rhoDRDownTest3() throws ParseException, LearningProblemUnsupportedException {
+ public void rhoDRDownTest3() throws ParseException, LearningProblemUnsupportedException, ComponentInitException {
AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.KRK_ZERO_ONE);
baseURI = reasoner.getBaseURI();
@@ -152,6 +155,10 @@
System.out.println(" UNIT TEST INCOMPLETE AFTER FRAMEWORK CHANGE, BECAUSE CLASS HIERARCHY IS NOT PASSED TO REFINEMENT OPERATOR ");
RhoDRDown op = new RhoDRDown();
op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
Description concept = KBParser.parseConcept("EXISTS \"http://www.test.de/test#hasPiece\".EXISTS \"http://www.test.de/test#hasLowerRankThan\".(\"http://www.test.de/test#WRook\" AND TOP)");
Set<Description> results = op.refine(concept,8);
@@ -191,39 +198,59 @@
}
@Test
- public void rhoDRDownTest4() throws ParseException, LearningProblemUnsupportedException {
- AbstractReasonerComponent rs = TestOntologies.getTestOntology(TestOntology.RHO1);
- RefinementOperator operator = new RhoDRDown();
- ((RhoDRDown)operator).setReasoner(rs);
+ public void rhoDRDownTest4() throws ParseException, LearningProblemUnsupportedException, ComponentInitException {
+ AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.RHO1);
+
+ RhoDRDown op = new RhoDRDown();
+ op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
+
Description concept = KBParser.parseConcept("(car AND EXISTS hasOwner.person)");
// Description concept = Thing.instance;
- Set<Description> refinements = operator.refine(concept, 6);
+ Set<Description> refinements = op.refine(concept, 6);
for(Description refinement : refinements) {
System.out.println(refinement);
}
}
@Test
- public void rhoDRDownTest5() throws ParseException, LearningProblemUnsupportedException {
- AbstractReasonerComponent rs = TestOntologies.getTestOntology(TestOntology.SWORE);
- RefinementOperator operator = new RhoDRDown();
- ((RhoDRDown)operator).setReasoner(rs);
+ public void rhoDRDownTest5() throws ParseException, LearningProblemUnsupportedException, ComponentInitException {
+ AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.SWORE);
+ reasoner.init();
+
+ RhoDRDown op = new RhoDRDown();
+ op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
+
// Description concept = KBParser.parseConcept("((NOT \"http://ns.softwiki.de/req/Requirement\") OR (ALL \"http://ns.softwiki.de/req/isCreatedBy\".(NOT \"http://ns.softwiki.de/req/Creditor\")))");
Description concept = KBParser.parseConcept("(NOT \"http://ns.softwiki.de/req/Requirement\" OR ALL \"http://ns.softwiki.de/req/isCreatedBy\".NOT \"http://ns.softwiki.de/req/Creditor\")");
System.out.println(concept);
- Set<Description> refinements = operator.refine(concept, 7);
+ Set<Description> refinements = op.refine(concept, 7);
for(Description refinement : refinements) {
System.out.println(refinement);
}
}
@Test
- public void invertedOperatorTest() throws ParseException {
- AbstractReasonerComponent rs = TestOntologies.getTestOntology(TestOntology.RHO1);
- RhoDRDown rho = new RhoDRDown();
- rho.setReasoner(rs);
- rho.setDropDisjuncts(true);
- RefinementOperator operator = new OperatorInverter(rho);
+ public void invertedOperatorTest() throws ParseException, ComponentInitException {
+ AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.RHO1);
+ reasoner.init();
+
+ RhoDRDown op = new RhoDRDown();
+ op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.setDropDisjuncts(true);
+ op.init();
+
+ RefinementOperator operator = new OperatorInverter(op);
Description concept = KBParser.parseConcept("(limo AND EXISTS hasOwner.man)");
Set<Description> refinements = operator.refine(concept, 6);
for(Description refinement : refinements) {
@@ -235,13 +262,20 @@
}
@Test
- public void rhoDownTestPellet() {
+ public void rhoDownTestPellet() throws ComponentInitException {
Logger.getRootLogger().setLevel(Level.TRACE);
- AbstractReasonerComponent rs = TestOntologies.getTestOntology(TestOntology.FATHER);
- RhoDRDown rho = new RhoDRDown();
- rho.setReasoner(rs);
+ AbstractReasonerComponent reasoner = TestOntologies.getTestOntology(TestOntology.FATHER);
+ reasoner.init();
+
+ RhoDRDown op = new RhoDRDown();
+ op.setReasoner(reasoner);
+ op.setSubHierarchy(reasoner.getClassHierarchy());
+ op.setObjectPropertyHierarchy(reasoner.getObjectPropertyHierarchy());
+ op.setDataPropertyHierarchy(reasoner.getDatatypePropertyHierarchy());
+ op.init();
+
NamedClass nc = new NamedClass("http://example.com/father#male");
- Set<Description> refinements = rho.refine(nc, 5);
+ Set<Description> refinements = op.refine(nc, 5);
for(Description refinement : refinements) {
System.out.println(refinement);
}
@@ -256,7 +290,7 @@
// (male AND EXISTS hasChild.TOP)
// System.out.println(rs);
// System.out.println("most general properties: " + rs.getMostGeneralProperties());
- System.out.println(rs.getObjectPropertyHierarchy());
+ System.out.println(reasoner.getObjectPropertyHierarchy());
assertTrue(refinements.size()==8);
}
Modified: trunk/components-core/src/test/java/org/dllearner/test/junit/TestOntologies.java
===================================================================
--- trunk/components-core/src/test/java/org/dllearner/test/junit/TestOntologies.java 2011-12-05 09:15:13 UTC (rev 3470)
+++ trunk/components-core/src/test/java/org/dllearner/test/junit/TestOntologies.java 2011-12-05 09:42:14 UTC (rev 3471)
@@ -126,13 +126,13 @@
} else if(ont.equals(TestOntology.CARCINOGENESIS)) {
owlFile = "../examples/carcinogenesis/carcinogenesis.owl";
} else if(ont.equals(TestOntology.EPC_OE)) {
- owlFile = "../examples/epc/sap_epc_oe.owl";
+ owlFile = "../test/epc/sap_epc_oe.owl";
} else if(ont.equals(TestOntology.KRK_ZERO_ONE)) {
- owlFile = "../examples/krk/KRK_ZERO_ONE.owl";
+ owlFile = "../test/krk/KRK_ZERO_ONE.owl";
} else if(ont.equals(TestOntology.DBPEDIA_OWL)) {
owlFile = "/home/jl/promotion/ontologien/dbpedia.owl";
} else if(ont.equals(TestOntology.TRAINS_OWL)) {
- owlFile = "../examples/cross-benchmark/trains/trains.owl";
+ owlFile = "../test/cross-benchmark/trains/trains.owl";
} else if(ont.equals(TestOntology.SWORE)) {
owlFile = "../examples/swore/swore.rdf";
} else if(ont.equals(TestOntology.MDM)) {
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