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[DL-Learner SVN] SF.net SVN: dl-learner:[2156] trunk/src/dl-learner/org/dllearner
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From: <lor...@us...> - 2010-05-31 13:19:50
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Revision: 2156
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=2156&view=rev
Author: lorenz_b
Date: 2010-05-31 13:19:41 +0000 (Mon, 31 May 2010)
Log Message:
-----------
Removed some unused classes.
Removed most of the compiler warnings.
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/algorithms/celoe/CELOE.java
trunk/src/dl-learner/org/dllearner/algorithms/celoe/OEHeuristicRuntime.java
trunk/src/dl-learner/org/dllearner/algorithms/el/ELLearningAlgorithm.java
trunk/src/dl-learner/org/dllearner/algorithms/isle/ISLE.java
trunk/src/dl-learner/org/dllearner/algorithms/refinement/ROLearner.java
trunk/src/dl-learner/org/dllearner/examples/Carcinogenesis.java
trunk/src/dl-learner/org/dllearner/examples/KRK.java
trunk/src/dl-learner/org/dllearner/examples/KRKOntologyTBox.java
trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java
trunk/src/dl-learner/org/dllearner/gui/widgets/AbstractWidgetPanel.java
trunk/src/dl-learner/org/dllearner/kb/KBFile.java
trunk/src/dl-learner/org/dllearner/kb/OWLAPIOntology.java
trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitor.java
trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitorImproved.java
trunk/src/dl-learner/org/dllearner/kb/extraction/ClassNode.java
trunk/src/dl-learner/org/dllearner/kb/extraction/InstanceNode.java
trunk/src/dl-learner/org/dllearner/kb/sparql/SparqlKnowledgeSource.java
trunk/src/dl-learner/org/dllearner/reasoning/OWLAPIReasoner.java
trunk/src/dl-learner/org/dllearner/reasoning/PelletReasoner.java
trunk/src/dl-learner/org/dllearner/refinementoperators/RhoDRDown.java
trunk/src/dl-learner/org/dllearner/scripts/SemanticBible.java
trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java
trunk/src/dl-learner/org/dllearner/scripts/evaluation/StatsGenerator.java
trunk/src/dl-learner/org/dllearner/scripts/improveWikipedia/ConceptSelector.java
trunk/src/dl-learner/org/dllearner/scripts/matching/DBpediaLinkedGeoData.java
trunk/src/dl-learner/org/dllearner/scripts/matching/Mcollect.java
trunk/src/dl-learner/org/dllearner/scripts/tiger/LogHelper.java
trunk/src/dl-learner/org/dllearner/test/SparqlExtractionTest.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/ExpressionEditor.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/ManchesterOWLSyntaxParser.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/OWLAutoCompleter.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/VerifyingOptionPane.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/rendering/KeywordColorMap.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/rendering/ManchesterOWLSyntaxObjectRenderer.java
Removed Paths:
-------------
trunk/src/dl-learner/org/dllearner/scripts/evaluation/EvaluationGUI.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/OWLExpressionParserException.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/ParserException.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/editor/ParserUtil.java
trunk/src/dl-learner/org/dllearner/tools/ore/ui/rendering/OWLTableCellRenderer.java
Modified: trunk/src/dl-learner/org/dllearner/algorithms/celoe/CELOE.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/celoe/CELOE.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/algorithms/celoe/CELOE.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -21,7 +21,6 @@
import java.text.DecimalFormat;
import java.util.Collection;
-import java.util.Collections;
import java.util.Iterator;
import java.util.LinkedList;
import java.util.List;
Modified: trunk/src/dl-learner/org/dllearner/algorithms/celoe/OEHeuristicRuntime.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/celoe/OEHeuristicRuntime.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/algorithms/celoe/OEHeuristicRuntime.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -21,7 +21,6 @@
import java.util.Comparator;
-import org.dllearner.algorithms.SearchTreeNode;
import org.dllearner.utilities.owl.ConceptComparator;
/**
Modified: trunk/src/dl-learner/org/dllearner/algorithms/el/ELLearningAlgorithm.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/el/ELLearningAlgorithm.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/algorithms/el/ELLearningAlgorithm.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -34,7 +34,6 @@
import org.dllearner.core.configurators.ELLearningAlgorithmConfigurator;
import org.dllearner.core.options.CommonConfigOptions;
import org.dllearner.core.options.ConfigOption;
-import org.dllearner.core.options.StringConfigOption;
import org.dllearner.core.owl.Description;
import org.dllearner.core.owl.Thing;
import org.dllearner.learningproblems.EvaluatedDescriptionPosNeg;
Modified: trunk/src/dl-learner/org/dllearner/algorithms/isle/ISLE.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/isle/ISLE.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/algorithms/isle/ISLE.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -31,15 +31,12 @@
import org.apache.log4j.Logger;
import org.dllearner.algorithms.celoe.CELOE;
-import org.dllearner.algorithms.celoe.OEHeuristicRuntime;
import org.dllearner.algorithms.celoe.OENode;
import org.dllearner.core.ComponentInitException;
import org.dllearner.core.EvaluatedDescription;
import org.dllearner.core.LearningAlgorithm;
import org.dllearner.core.LearningProblem;
import org.dllearner.core.ReasonerComponent;
-import org.dllearner.core.configurators.CELOEConfigurator;
-import org.dllearner.core.configurators.Configurator;
import org.dllearner.core.configurators.ISLEConfigurator;
import org.dllearner.core.options.BooleanConfigOption;
import org.dllearner.core.options.CommonConfigOptions;
Modified: trunk/src/dl-learner/org/dllearner/algorithms/refinement/ROLearner.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/refinement/ROLearner.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/algorithms/refinement/ROLearner.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -377,7 +377,6 @@
// Kernalgorithmus
@Override
- @SuppressWarnings("unchecked")
public void start() {
isRunning = true;
runtime=System.currentTimeMillis();
Modified: trunk/src/dl-learner/org/dllearner/examples/Carcinogenesis.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/examples/Carcinogenesis.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/examples/Carcinogenesis.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -537,7 +537,6 @@
return new DoubleDatatypePropertyAssertion(dp, ind, value);
}
- @SuppressWarnings({"unused"})
private static DisjointClassesAxiom getDisjointClassesAxiom(Set<String> classes) {
Set<Description> descriptions = new HashSet<Description>();
for(String namedClass : classes)
Modified: trunk/src/dl-learner/org/dllearner/examples/KRK.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/examples/KRK.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/examples/KRK.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -707,7 +707,6 @@
return new ObjectProperty(ontologyIRI + "#" + name);
}
- @SuppressWarnings("unused")
protected static DatatypeProperty getDatatypeProperty(String name) {
return new DatatypeProperty(ontologyIRI + "#" + name);
}
@@ -716,12 +715,10 @@
return new NamedClass(ontologyIRI + "#" + name);
}
- @SuppressWarnings("unused")
protected static String getURI(String name) {
return ontologyIRI + "#" + name;
}
- @SuppressWarnings("unused")
protected static ClassAssertionAxiom getConceptAssertion(String concept,
String i) {
Individual ind = getIndividual(i);
@@ -729,7 +726,6 @@
return new ClassAssertionAxiom(c, ind);
}
- @SuppressWarnings("unused")
protected static ObjectPropertyAssertion getRoleAssertion(String role,
String i1, String i2) {
Individual ind1 = getIndividual(i1);
Modified: trunk/src/dl-learner/org/dllearner/examples/KRKOntologyTBox.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/examples/KRKOntologyTBox.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/examples/KRKOntologyTBox.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -215,7 +215,6 @@
return new ObjectProperty(ontologyURI + "#" + name);
}
- @SuppressWarnings("unused")
protected static DatatypeProperty getDatatypeProperty(String name) {
return new DatatypeProperty(ontologyURI + "#" + name);
}
@@ -224,12 +223,10 @@
return new NamedClass(ontologyURI + "#" + name);
}
- @SuppressWarnings("unused")
protected static String getURI(String name) {
return ontologyURI + "#" + name;
}
- @SuppressWarnings("unused")
protected static ClassAssertionAxiom getConceptAssertion(String concept,
String instance) {
Individual ind = getIndividual(instance);
@@ -237,7 +234,6 @@
return new ClassAssertionAxiom(c, ind);
}
- @SuppressWarnings("unused")
protected static ObjectPropertyAssertion getRoleAssertion(String role,
String i1, String i2) {
Individual ind1 = getIndividual(i1);
Modified: trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -34,7 +34,6 @@
import org.dllearner.algorithms.SearchTreeNode;
import org.dllearner.algorithms.refinement2.ExampleBasedNode;
-import org.dllearner.algorithms.refinement2.NodeComparatorStable;
/**
* A tree model used for displaying example based nodes. A search tree can
Modified: trunk/src/dl-learner/org/dllearner/gui/widgets/AbstractWidgetPanel.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/widgets/AbstractWidgetPanel.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/gui/widgets/AbstractWidgetPanel.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -39,6 +39,11 @@
public abstract class AbstractWidgetPanel<T> extends JPanel {
/**
+ *
+ */
+ private static final long serialVersionUID = 3631056807739752782L;
+
+ /**
* The configuration option configured by this widget.
*/
protected ConfigOption<T> configOption;
Modified: trunk/src/dl-learner/org/dllearner/kb/KBFile.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/KBFile.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/KBFile.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -49,7 +49,6 @@
*/
public class KBFile extends KnowledgeSource {
- @SuppressWarnings("unused")
private static Logger logger = Logger.getLogger(KBFile.class);
private KB kb;
Modified: trunk/src/dl-learner/org/dllearner/kb/OWLAPIOntology.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/OWLAPIOntology.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/OWLAPIOntology.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -13,7 +13,6 @@
import org.dllearner.core.owl.KB;
import org.semanticweb.owlapi.model.OWLClass;
import org.semanticweb.owlapi.model.OWLDataProperty;
-import org.semanticweb.owlapi.model.OWLIndividual;
import org.semanticweb.owlapi.model.OWLNamedIndividual;
import org.semanticweb.owlapi.model.OWLObjectProperty;
import org.semanticweb.owlapi.model.OWLOntology;
Modified: trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitor.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitor.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitor.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -46,7 +46,6 @@
public class SparqlTupleAquisitor extends TupleAquisitor {
- @SuppressWarnings("unused")
private static Logger logger = Logger.getLogger(SparqlTupleAquisitor.class);
protected static final String PREDICATE = "predicate";
protected static final String OBJECT = "object";
Modified: trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitorImproved.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitorImproved.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/aquisitors/SparqlTupleAquisitorImproved.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -43,7 +43,6 @@
*/
public class SparqlTupleAquisitorImproved extends SparqlTupleAquisitor {
- @SuppressWarnings("unused")
private static Logger logger = Logger.getLogger(SparqlTupleAquisitorImproved.class);
private Map<String,SortedSet<RDFNodeTuple>> resources = new HashMap<String, SortedSet<RDFNodeTuple>>();
int recursionDepth;
Modified: trunk/src/dl-learner/org/dllearner/kb/extraction/ClassNode.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/extraction/ClassNode.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/extraction/ClassNode.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -43,7 +43,6 @@
*/
public class ClassNode extends Node {
- @SuppressWarnings("unused")
private static Logger logger = Logger
.getLogger(ClassNode.class);
Modified: trunk/src/dl-learner/org/dllearner/kb/extraction/InstanceNode.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/extraction/InstanceNode.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/extraction/InstanceNode.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -49,7 +49,6 @@
*/
public class InstanceNode extends Node {
- @SuppressWarnings("unused")
private static Logger logger = Logger
.getLogger(InstanceNode.class);
Modified: trunk/src/dl-learner/org/dllearner/kb/sparql/SparqlKnowledgeSource.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/kb/sparql/SparqlKnowledgeSource.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/kb/sparql/SparqlKnowledgeSource.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -215,7 +215,6 @@
* @see org.dllearner.core.Component#applyConfigEntry(org.dllearner.core.ConfigEntry)
*/
@Override
- @SuppressWarnings({ "unchecked" })
public <T> void applyConfigEntry(ConfigEntry<T> entry)
throws InvalidConfigOptionValueException {
//TODO remove this function
Modified: trunk/src/dl-learner/org/dllearner/reasoning/OWLAPIReasoner.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/reasoning/OWLAPIReasoner.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/reasoning/OWLAPIReasoner.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -835,6 +835,9 @@
private TreeSet<ObjectProperty> getFirstObjectProperties(NodeSet<OWLObjectProperty> nodeSet) {
TreeSet<ObjectProperty> roles = new TreeSet<ObjectProperty>(roleComparator);
for(Node<OWLObjectProperty> node : nodeSet) {
+ if(node.isBottomNode() || node.isTopNode()){
+ continue;
+ }
// take one element from the set and ignore the rest
// (TODO: we need to make sure we always ignore the same concepts)
OWLObjectProperty property = node.getRepresentativeElement();
@@ -848,6 +851,9 @@
private TreeSet<DatatypeProperty> getFirstDatatypeProperties(NodeSet<OWLDataProperty> nodeSet) {
TreeSet<DatatypeProperty> roles = new TreeSet<DatatypeProperty>(roleComparator);
for(Node<OWLDataProperty> node : nodeSet) {
+ if(node.isBottomNode() || node.isTopNode()){
+ continue;
+ }
OWLDataProperty property = node.getRepresentativeElement();
roles.add(new DatatypeProperty(property.toStringID()));
}
Modified: trunk/src/dl-learner/org/dllearner/reasoning/PelletReasoner.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/reasoning/PelletReasoner.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/reasoning/PelletReasoner.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -1484,6 +1484,9 @@
private TreeSet<ObjectProperty> getFirstObjectProperties(NodeSet<OWLObjectProperty> setOfSets) {
TreeSet<ObjectProperty> roles = new TreeSet<ObjectProperty>(roleComparator);
for(Node<OWLObjectProperty> innerSet : setOfSets) {
+ if(innerSet.isBottomNode() || innerSet.isTopNode()){
+ continue;
+ }
// take one element from the set and ignore the rest
// (TODO: we need to make sure we always ignore the same concepts)
OWLObjectProperty property = innerSet.iterator().next();
Modified: trunk/src/dl-learner/org/dllearner/refinementoperators/RhoDRDown.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/refinementoperators/RhoDRDown.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/refinementoperators/RhoDRDown.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -1433,6 +1433,7 @@
}*/
// we need to test whether NOT A AND B is equivalent to BOTTOM
+ @SuppressWarnings("unused")
private boolean isNotADisjoint(NamedClass a, NamedClass b) {
// Map<NamedClass,Boolean> tmp = notABDisjoint.get(a);
// Boolean tmp2 = null;
@@ -1452,6 +1453,7 @@
// we need to test whether NOT A AND B = B
// (if not then NOT A is not meaningful in the sense that it does
// not semantically add anything to B)
+ @SuppressWarnings("unused")
private boolean isNotAMeaningful(NamedClass a, NamedClass b) {
Description notA = new Negation(a);
Description d = new Intersection(notA, b);
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBible.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBible.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBible.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -165,7 +165,6 @@
}
- @SuppressWarnings("unchecked")
private static void learnOriginal(NamedClass target, SortedSet<Individual> posExamples, SortedSet<Individual> negExamples) {
List<? extends EvaluatedDescription> conceptresults = new ArrayList<EvaluatedDescriptionPosNeg>();
System.out.println("Starting to learn original");
Deleted: trunk/src/dl-learner/org/dllearner/scripts/evaluation/EvaluationGUI.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/evaluation/EvaluationGUI.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/EvaluationGUI.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -1,1076 +0,0 @@
-package org.dllearner.scripts.evaluation;
-
-import java.awt.BorderLayout;
-import java.awt.CardLayout;
-import java.awt.Color;
-import java.awt.Component;
-import java.awt.GridBagConstraints;
-import java.awt.GridBagLayout;
-import java.awt.GridLayout;
-import java.awt.Insets;
-import java.awt.Point;
-import java.awt.SystemColor;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.MouseEvent;
-import java.awt.event.MouseMotionListener;
-import java.io.File;
-import java.io.FileInputStream;
-import java.io.FileOutputStream;
-import java.io.IOException;
-import java.io.InputStream;
-import java.io.ObjectInputStream;
-import java.io.ObjectOutputStream;
-import java.io.OutputStream;
-import java.io.StringWriter;
-import java.net.MalformedURLException;
-import java.net.URISyntaxException;
-import java.util.ArrayList;
-import java.util.HashMap;
-import java.util.List;
-import java.util.Map;
-import java.util.Set;
-import java.util.StringTokenizer;
-import java.util.TreeSet;
-
-import javax.swing.AbstractAction;
-import javax.swing.BorderFactory;
-import javax.swing.Box;
-import javax.swing.BoxLayout;
-import javax.swing.ButtonGroup;
-import javax.swing.ImageIcon;
-import javax.swing.JButton;
-import javax.swing.JCheckBox;
-import javax.swing.JFrame;
-import javax.swing.JLabel;
-import javax.swing.JPanel;
-import javax.swing.JRadioButton;
-import javax.swing.JScrollPane;
-import javax.swing.JSeparator;
-import javax.swing.JSplitPane;
-import javax.swing.JTable;
-import javax.swing.JTextPane;
-import javax.swing.JWindow;
-import javax.swing.SwingUtilities;
-import javax.swing.UIManager;
-import javax.swing.UnsupportedLookAndFeelException;
-import javax.swing.border.Border;
-import javax.swing.border.EmptyBorder;
-import javax.swing.event.ListSelectionEvent;
-import javax.swing.event.ListSelectionListener;
-import javax.swing.table.TableCellRenderer;
-import javax.swing.text.Style;
-import javax.swing.text.StyleConstants;
-import javax.swing.text.StyledDocument;
-import javax.swing.text.View;
-
-import org.dllearner.core.ComponentInitException;
-import org.dllearner.core.LearningProblemUnsupportedException;
-import org.dllearner.core.owl.Description;
-import org.dllearner.core.owl.NamedClass;
-import org.dllearner.learningproblems.EvaluatedDescriptionClass;
-import org.dllearner.tools.ore.ui.GraphicalCoveragePanel;
-import org.dllearner.tools.ore.ui.MarkableClassesTable;
-import org.dllearner.tools.ore.ui.ResultTable;
-import org.dllearner.tools.ore.ui.SelectableClassExpressionsTable;
-import org.dllearner.utilities.owl.OWLAPIDescriptionConvertVisitor;
-import org.mindswap.pellet.utils.SetUtils;
-import org.semanticweb.owlapi.model.OWLClassExpression;
-
-import com.clarkparsia.owlapi.explanation.io.manchester.Keyword;
-import com.clarkparsia.owlapi.explanation.io.manchester.ManchesterSyntaxObjectRenderer;
-import com.clarkparsia.owlapi.explanation.io.manchester.TextBlockWriter;
-import com.jgoodies.looks.plastic.PlasticLookAndFeel;
-
-public class EvaluationGUI extends JFrame implements ActionListener, ListSelectionListener, MouseMotionListener {
-
- /**
- *
- */
- private static final long serialVersionUID = -3097551929270352556L;
-
- private File inputFile;
-
- private RatingTablePanel tab1;
- private RatingTablePanel tab2;
- private RatingTablePanel tab3;
- private RatingTablePanel tab4;
- private RatingTablePanel tab5;
- private RatingTablePanel tab6;
- private RatingTablePanel tab7;
- private RatingTablePanel tab8;
- private RatingTablePanel tab9;
- private RatingTablePanel tab10;
-
- private SelectableClassExpressionsTable defaultTab;
- private static String INCONSISTENCYWARNING =
- "<html>Warning. Selected class expressions leads to an inconsistent ontology!<br>" +
- "(Often, suggestions leading to an inconsistency should still be added. They help to detect problems in " +
- "the ontology elsewhere.<br>" +
- " See http://dl-learner.org/files/screencast/protege/screencast.htm .)</html>";
- private JLabel inconsistencyLabel;
- private JCheckBox noSuggestionCheckBox;
- private JCheckBox alternateSuggestionCheckBox;
- private ButtonGroup bg;
-
- private GraphicalCoveragePanel graphPanel;
- private GraphicalCoveragePanel graphPanel2;
-
- private MarkableClassesTable classesTable;
- private JButton nextFinishButton;
- private JLabel messageLabel;
-
- private JWindow coverageWindow;
-
- private JPanel cardPanel;
- private CardLayout cardLayout;
-
- private ResultTable mouseOverTable;
- private int oldRow;
-
- private static String SUPERCLASSTEXT = "Showing suggestions for superclasses of ";
- private static String EQUIVALENTCLASSTEXT = "Showing suggestions for classes equivalent to ";
-
- private static String SINGLETABLEVIEW = "single";
- private static String MULTITABLEVIEW = "multi";
-
- private int currentClassIndex = 0;
-
- private boolean showingEquivalentSuggestions = false;
- private boolean showingMultiTables = false;
-
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastEquivalenceStandardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastEquivalenceFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastEquivalencePredaccMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastEquivalenceGenFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastEquivalenceJaccardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
-
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastSuperStandardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastSuperFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastSuperPredaccMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastSuperGenFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> fastSuperJaccardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
-
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlEquivalenceStandardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlEquivalenceFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlEquivalencePredaccMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlEquivalenceGenFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlEquivalenceJaccardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
-
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlSuperStandardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlSuperFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlSuperPredaccMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlSuperGenFMeasureMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> owlSuperJaccardMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
-
- private Map<NamedClass, List<EvaluatedDescriptionClass>> defaultEquivalenceMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
- private Map<NamedClass, List<EvaluatedDescriptionClass>> defaultSuperMap = new HashMap<NamedClass, List<EvaluatedDescriptionClass>>();
-
- private String baseURI;
- private Map<String, String> prefixes;
-
- private Map<NamedClass, Set<OWLClassExpression>> assertedEquivalentClasses = new HashMap<NamedClass, Set<OWLClassExpression>>();
- private Map<NamedClass, Set<OWLClassExpression>> assertedSuperClasses = new HashMap<NamedClass, Set<OWLClassExpression>>();
-
-
- private Map<NamedClass, String> selectedEquivalenceMap = new HashMap<NamedClass, String>();
- private Map<NamedClass, String> selectedSuperMap = new HashMap<NamedClass, String>();
-
- private Map<NamedClass, List<Integer>> equivalentClassListRating = new HashMap<NamedClass, List<Integer>>();
- private Map<NamedClass, List<Integer>> superClassListRating = new HashMap<NamedClass, List<Integer>>();
-
- public EvaluationGUI(File input) throws ComponentInitException, MalformedURLException,
- LearningProblemUnsupportedException {
- super();
- inputFile = input;
- loadResults(input);
- setTitle(input.getName());
- createUI();
- createCoverageWindow();
- classesTable.setSelectedClass(currentClassIndex);
- graphPanel.initManchesterSyntax(baseURI, prefixes);
- graphPanel2.initManchesterSyntax(baseURI, prefixes);
- graphPanel.setConcept(classesTable.getSelectedClass(currentClassIndex));
- graphPanel2.setConcept(classesTable.getSelectedClass(currentClassIndex));
- if (defaultEquivalenceMap.get(classesTable.getSelectedClass(currentClassIndex)) != null) {
- showEquivalentSuggestions(classesTable.getSelectedClass(currentClassIndex));
- } else {
- showSuperSuggestions(classesTable.getSelectedClass(currentClassIndex));
- }
-
- cardLayout.last(cardPanel);
- pack();
- setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE);
- setExtendedState(JFrame.MAXIMIZED_BOTH);
- setVisible(true);
- }
-
- private void createUI() {
-
- setLayout(new BorderLayout());
- JSplitPane split = new JSplitPane(JSplitPane.HORIZONTAL_SPLIT);
- split.setDividerLocation(0.3);
- split.setOneTouchExpandable(true);
- classesTable = new MarkableClassesTable();
- classesTable.addClasses(new TreeSet<NamedClass>(SetUtils.union(defaultEquivalenceMap.keySet(), defaultSuperMap
- .keySet())));
- JScrollPane classesScroll = new JScrollPane(classesTable);
- classesTable.addMouseMotionListener(this);
- split.setLeftComponent(classesScroll);
-
- JPanel holder = new JPanel(new BorderLayout());
- JScrollPane suggestionsScroll = new JScrollPane(createMainPanel());
- holder.add(suggestionsScroll, BorderLayout.CENTER);
-
- JPanel buttonPanel = new JPanel();
- buttonPanel.setLayout(new BorderLayout());
- JSeparator separator = new JSeparator();
- buttonPanel.add(separator, BorderLayout.NORTH);
- Box buttonBox = new Box(BoxLayout.X_AXIS);
- nextFinishButton = new JButton("Next");
- nextFinishButton.setActionCommand("next");
- nextFinishButton.addActionListener(this);
- buttonBox.add(nextFinishButton);
- buttonPanel.add(buttonBox, java.awt.BorderLayout.EAST);
- holder.add(buttonPanel, BorderLayout.SOUTH);
- split.setRightComponent(holder);
- addMouseMotionListener(this);
- add(split);
-
- }
-
- private JPanel createMainPanel() {
- JPanel messageTablesPanel = new JPanel();
- messageTablesPanel.setLayout(new BorderLayout());
-
- messageLabel = new JLabel();
- messageLabel.addMouseMotionListener(this);
- messageTablesPanel.add(messageLabel, BorderLayout.NORTH);
-
- cardPanel = new JPanel();
- cardPanel.setBorder(new EmptyBorder(new Insets(5, 10, 5, 10)));
- cardLayout = new CardLayout();
-
- cardPanel.add(createMultiTablesPanel(), MULTITABLEVIEW);
- cardPanel.add(createSingleTablePanel(), SINGLETABLEVIEW);
- cardPanel.setLayout(cardLayout);
-
- messageTablesPanel.add(cardPanel, BorderLayout.CENTER);
-
- return messageTablesPanel;
- }
-
- private void showInconsistencyWarning(boolean show){
- if(show){
- inconsistencyLabel.setForeground(Color.BLACK);
- } else {
- inconsistencyLabel.setForeground(SystemColor.control);
- }
-
- }
-
- private JPanel createSingleTablePanel() {
- JPanel panel = new JPanel(new GridBagLayout());
- GridBagConstraints c = new GridBagConstraints();
- c.fill = GridBagConstraints.BOTH;
- c.gridwidth = GridBagConstraints.REMAINDER;
- c.weightx = 1.0;
- c.weighty = 0.0;
- JPanel tableHolderPanel = new JPanel(new GridBagLayout());
- GridBagConstraints gbc = new GridBagConstraints();
- gbc.fill = GridBagConstraints.HORIZONTAL;
- gbc.weightx = 1.0;
- defaultTab = new SelectableClassExpressionsTable();
- defaultTab.getColumn(1).setCellRenderer(new MultiLineTableCellRenderer());
- defaultTab.getSelectionModel().addListSelectionListener(this);
- defaultTab.setRowHeightEnabled(true);
- tableHolderPanel.add(new JScrollPane(defaultTab), gbc);
- graphPanel = new GraphicalCoveragePanel("");
- gbc.weightx = 0.0;
- tableHolderPanel.add(graphPanel, gbc);
- panel.add(tableHolderPanel, c);
-
- inconsistencyLabel = new JLabel();
- panel.add(inconsistencyLabel, c);
- inconsistencyLabel.setText(INCONSISTENCYWARNING);
- inconsistencyLabel.setForeground(SystemColor.control);
-
- c.weightx = 1.0;
- c.weighty = 0.0;
- c.ipady = 10;
- c.fill = GridBagConstraints.HORIZONTAL;
- noSuggestionCheckBox = new JCheckBox();
- noSuggestionCheckBox.setAction(new AbstractAction(
- "There is no appropriate suggestion for this class in your opinion.") {
-
- /**
- *
- */
- private static final long serialVersionUID = 5923669465504160583L;
-
- @Override
- public void actionPerformed(ActionEvent e) {
- defaultTab.clearSelection();
- defaultTab.removeSelection();
- graphPanel.clear();
- showInconsistencyWarning(false);
- }
- });
- panel.add(noSuggestionCheckBox, c);
-
- alternateSuggestionCheckBox = new JCheckBox();
- alternateSuggestionCheckBox.setAction(new AbstractAction(
- "There is an appropriate suggestion in your opinion, but the algorithm did not suggest it.") {
-
- /**
- *
- */
- private static final long serialVersionUID = -8642827827310795390L;
-
- @Override
- public void actionPerformed(ActionEvent e) {
- defaultTab.clearSelection();
- defaultTab.removeSelection();
- graphPanel.clear();
- showInconsistencyWarning(false);
- }
- });
- panel.add(alternateSuggestionCheckBox, c);
-
- bg = new ButtonGroup();
- bg.add(alternateSuggestionCheckBox);
- bg.add(noSuggestionCheckBox);
- noSuggestionCheckBox.setSelected(true);
- return panel;
- }
-
- private JPanel createMultiTablesPanel() {
- JPanel tablesHolderPanel = new JPanel();
- tablesHolderPanel.setLayout(new GridLayout(5, 2, 5, 5));
- tablesHolderPanel.addMouseMotionListener(this);
- tab1 = new RatingTablePanel();
- tab1.addMouseMotionListener(this);
- tablesHolderPanel.add(tab1);
- tab2 = new RatingTablePanel();
- tab2.addMouseMotionListener(this);
- tablesHolderPanel.add(tab2);
- tab3 = new RatingTablePanel();
- tab3.addMouseMotionListener(this);
- tablesHolderPanel.add(tab3);
- tab4 = new RatingTablePanel();
- tab4.addMouseMotionListener(this);
- tablesHolderPanel.add(tab4);
- tab5 = new RatingTablePanel();
- tab5.addMouseMotionListener(this);
- tablesHolderPanel.add(tab5);
- tab6 = new RatingTablePanel();
- tab6.addMouseMotionListener(this);
- tablesHolderPanel.add(tab6);
- tab7 = new RatingTablePanel();
- tab7.addMouseMotionListener(this);
- tablesHolderPanel.add(tab7);
- tab8 = new RatingTablePanel();
- tab8.addMouseMotionListener(this);
- tablesHolderPanel.add(tab8);
- tab9 = new RatingTablePanel();
- tab9.addMouseMotionListener(this);
- tablesHolderPanel.add(tab9);
- tab10 = new RatingTablePanel();
- tab10.addMouseMotionListener(this);
- tablesHolderPanel.add(tab10);
-
- return tablesHolderPanel;
- }
-
- private void showSingleTable() {
-
- graphPanel.clear();
- cardLayout.last(cardPanel);
- showingMultiTables = false;
- }
-
- private void showMultiTables() {
- cardLayout.first(cardPanel);
- showingMultiTables = true;
- }
-
- private void showEquivalentSuggestions(NamedClass nc) {
- messageLabel.setText("<html>" + EQUIVALENTCLASSTEXT
- + "<b>" + classesTable.getSelectedClass(currentClassIndex).toManchesterSyntaxString(baseURI, prefixes)
- + "</b></html>");
- if (owlEquivalenceStandardMap.get(nc) != null) {
-
- tab1.addResults(owlEquivalenceStandardMap.get(nc));
- tab2.addResults(owlEquivalenceFMeasureMap.get(nc));
- tab3.addResults(owlEquivalencePredaccMap.get(nc));
- tab4.addResults(owlEquivalenceJaccardMap.get(nc));
- tab5.addResults(owlEquivalenceGenFMeasureMap.get(nc));
-
- tab6.addResults(fastEquivalenceStandardMap.get(nc));
- tab7.addResults(fastEquivalenceFMeasureMap.get(nc));
- tab8.addResults(fastEquivalencePredaccMap.get(nc));
- tab9.addResults(fastEquivalenceJaccardMap.get(nc));
- tab10.addResults(fastEquivalenceGenFMeasureMap.get(nc));
- }
- defaultTab.addResults(defaultEquivalenceMap.get(nc));
-
- showingEquivalentSuggestions = true;
- }
-
- private void showSuperSuggestions(NamedClass nc) {
- messageLabel.setText("<html>" + SUPERCLASSTEXT
- + "<b>" + classesTable.getSelectedClass(currentClassIndex).toManchesterSyntaxString(baseURI, prefixes) + "</b></html>");
-
- if (owlSuperStandardMap.get(nc) != null) {
-
- tab1.addResults(owlSuperStandardMap.get(nc));
- tab2.addResults(owlSuperFMeasureMap.get(nc));
- tab3.addResults(owlSuperPredaccMap.get(nc));
- tab4.addResults(owlSuperJaccardMap.get(nc));
- tab5.addResults(owlSuperGenFMeasureMap.get(nc));
-
- tab6.addResults(fastSuperStandardMap.get(nc));
- tab7.addResults(fastSuperFMeasureMap.get(nc));
- tab8.addResults(fastSuperPredaccMap.get(nc));
- tab9.addResults(fastSuperJaccardMap.get(nc));
- tab10.addResults(fastSuperGenFMeasureMap.get(nc));
- }
-
- defaultTab.addResults(defaultSuperMap.get(nc));
-
- showingEquivalentSuggestions = false;
- }
-
- private void createCoverageWindow() {
- coverageWindow = new JWindow(this);
- graphPanel2 = new GraphicalCoveragePanel("");
- coverageWindow.add(graphPanel2);
- coverageWindow.pack();
- // coverageWindow.setLocationRelativeTo(classesTable);
- }
-
- @SuppressWarnings("unchecked")
- private void loadResults(File input) {
- InputStream fis = null;
-
- try {
- fis = new FileInputStream(input);
- ObjectInputStream o = new ObjectInputStream(fis);
-
- owlEquivalenceStandardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlEquivalenceFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlEquivalencePredaccMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlEquivalenceJaccardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlEquivalenceGenFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
-
- owlSuperStandardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlSuperFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlSuperPredaccMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlSuperJaccardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- owlSuperGenFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
-
- fastEquivalenceStandardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastEquivalenceFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastEquivalencePredaccMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastEquivalenceJaccardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastEquivalenceGenFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
-
- fastSuperStandardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastSuperFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastSuperPredaccMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastSuperJaccardMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- fastSuperGenFMeasureMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
-
- defaultEquivalenceMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
- defaultSuperMap = (HashMap<NamedClass, List<EvaluatedDescriptionClass>>) o.readObject();
-
- baseURI = (String) o.readObject();
- prefixes = (Map<String, String>) o.readObject();
-
- assertedEquivalentClasses = (Map<NamedClass, Set<OWLClassExpression>>) o.readObject();
- assertedSuperClasses = (Map<NamedClass, Set<OWLClassExpression>>) o.readObject();
-
- }
-
- catch (IOException e) {
- System.err.println(e);
- } catch (ClassNotFoundException e) {
- System.err.println(e);
- } finally {
- try {
- fis.close();
- } catch (Exception e) {
- }
- }
- }
-
- private void closeDialog() {
- setVisible(false);
- dispose();
- }
-
- private void showCoveragePanel(boolean show) {
- final boolean visible = show;
- SwingUtilities.invokeLater(new Runnable() {
-
- @Override
- public void run() {
- coverageWindow.setVisible(visible);
-
- }
- });
-
- }
-
- private void setCoverageLocationRelativeTo(Component component) {
- Component parent = component.getParent();
- Point componentLocation = component.getLocationOnScreen();
- Point p;
- if (componentLocation.getX() < parent.getSize().width / 2) {
- p = new Point((int) (componentLocation.getX() + parent.getSize().width / 2 + coverageWindow.getSize()
- .getWidth() / 2), componentLocation.y);
- } else {
- p = new Point((int) (componentLocation.getX() - parent.getSize().width / 2 - coverageWindow.getSize()
- .getWidth() / 2), componentLocation.y);
- }
-
- coverageWindow.setLocation(p);
- }
-
- @Override
- public void actionPerformed(ActionEvent e) {
- traceInput();
- if (e.getActionCommand().equals("next")) {
- defaultTab.clearSelection();
-
- NamedClass nc = classesTable.getSelectedClass(currentClassIndex);
- if(!showingMultiTables){
-
- }
- if (showingMultiTables && showingEquivalentSuggestions) {
- if (defaultSuperMap.get(nc) != null) {
- showSuperSuggestions(nc);
- showSingleTable();
- } else {
- currentClassIndex++;
- classesTable.setSelectedClass(currentClassIndex);
- graphPanel.setConcept(classesTable.getSelectedClass(currentClassIndex));
-
-
- if(defaultEquivalenceMap.get(classesTable.getSelectedClass(currentClassIndex)) != null){
- showEquivalentSuggestions(classesTable.getSelectedClass(currentClassIndex));
- } else {
- showSuperSuggestions(classesTable.getSelectedClass(currentClassIndex));
- }
- showSingleTable();
- }
-
- } else if (!showingMultiTables && showingEquivalentSuggestions) {
- if (owlEquivalenceStandardMap.get(nc) != null) {
- showMultiTables();
- } else if (defaultSuperMap.get(nc) != null) {
- showSuperSuggestions(nc);
- showSingleTable();
-// if (currentClassIndex + 1 >= defaultEquivalenceMap.keySet().size()) {
-// nextFinishButton.setText("Finish");
-// nextFinishButton.setActionCommand("finish");
-// }
- } else {
- currentClassIndex++;
- classesTable.setSelectedClass(currentClassIndex);
- graphPanel.setConcept(classesTable.getSelectedClass(currentClassIndex));
- if(defaultEquivalenceMap.get(classesTable.getSelectedClass(currentClassIndex)) != null){
- showEquivalentSuggestions(classesTable.getSelectedClass(currentClassIndex));
- } else {
- showSuperSuggestions(classesTable.getSelectedClass(currentClassIndex));
- }
-
- showSingleTable();
- }
-
- } else if (!showingMultiTables && !showingEquivalentSuggestions) {
- if (owlSuperStandardMap.get(nc) != null) {
- showMultiTables();
-
- } else {
-
- currentClassIndex++;
- classesTable.setSelectedClass(currentClassIndex);
- NamedClass newNc = classesTable.getSelectedClass(currentClassIndex);
- graphPanel.setConcept(newNc);
- if (defaultEquivalenceMap.get(newNc) != null) {
- showEquivalentSuggestions(newNc);
- } else {
- showSuperSuggestions(newNc);
- }
-
- showSingleTable();
- }
-
- } else {
-
- currentClassIndex++;
- classesTable.setSelectedClass(currentClassIndex);
- NamedClass newCl = classesTable.getSelectedClass(currentClassIndex);
- graphPanel.setConcept(newCl);
- if(defaultEquivalenceMap.containsKey(newCl)){
- showEquivalentSuggestions(newCl);
- } else {
- showSuperSuggestions(newCl);
- }
-
- showSingleTable();
- }
- setFinished();
- resetTablePanels();
-
- } else if (e.getActionCommand().equals("finish")) {
- closeDialog();
- saveInput();
- }
-
- }
-
- private void resetTablePanels(){
- tab1.reset();
- tab2.reset();
- tab3.reset();
- tab4.reset();
- tab5.reset();
- tab6.reset();
- tab7.reset();
- tab8.reset();
- tab9.reset();
- tab10.reset();
- bg.clearSelection();
- noSuggestionCheckBox.setSelected(true);
- showInconsistencyWarning(false);
- }
-
- private void traceInput(){
- NamedClass currentClass = classesTable.getSelectedClass(currentClassIndex);
- if (!showingMultiTables) {
- if (alternateSuggestionCheckBox.isSelected()) {
- if (showingEquivalentSuggestions) {
- selectedEquivalenceMap.put(currentClass, "m");
- } else {
- selectedSuperMap.put(currentClass, "m");
- }
- } else if (noSuggestionCheckBox.isSelected()) {
- if (showingEquivalentSuggestions) {
- selectedEquivalenceMap.put(currentClass, "n");
- } else {
- selectedSuperMap.put(currentClass, "n");
- }
- } else {
- int position = defaultTab.getSelectedPosition() - 1;
- if (showingEquivalentSuggestions) {
- selectedEquivalenceMap.put(currentClass, String.valueOf(position));
- } else {
- selectedSuperMap.put(currentClass, String.valueOf(position));
- }
- }
- } else {
- List<Integer> ratingList = new ArrayList<Integer>();
- ratingList.add(tab1.getRatingValue());
- ratingList.add(tab2.getRatingValue());
- ratingList.add(tab3.getRatingValue());
- ratingList.add(tab4.getRatingValue());
- ratingList.add(tab5.getRatingValue());
- ratingList.add(tab6.getRatingValue());
- ratingList.add(tab7.getRatingValue());
- ratingList.add(tab8.getRatingValue());
- ratingList.add(tab9.getRatingValue());
- ratingList.add(tab10.getRatingValue());
- if(showingEquivalentSuggestions){
- equivalentClassListRating.put(currentClass, ratingList);
- } else {
- superClassListRating.put(currentClass, ratingList);
- }
- }
- }
-
-
- private void saveInput(){
- OutputStream fos = null;
- int index = inputFile.getName().lastIndexOf('.');
- String fileName = "test.inp";
- if (index>0&& index <= inputFile.getName().length() - 2 ) {
- fileName = inputFile.getName().substring(0, index) + ".inp";
- }
- File file = new File(fileName);
- try {
- fos = new FileOutputStream(file);
- ObjectOutputStream o = new ObjectOutputStream(fos);
-
- o.writeObject(selectedEquivalenceMap);
- o.writeObject(selectedSuperMap);
-
- o.writeObject(equivalentClassListRating);
- o.writeObject(superClassListRating);
-
- o.flush();
- o.close();
- } catch (IOException e) {
- e.printStackTrace();
- } finally {
- try {
- fos.close();
- } catch (Exception e) {
- }
- }
- }
-
- private void setFinished() {
- NamedClass nc = classesTable.getSelectedClass(currentClassIndex);
- if (currentClassIndex == SetUtils.union(defaultEquivalenceMap.keySet(), defaultSuperMap.keySet()).size() - 1) {
- if (showingEquivalentSuggestions && owlEquivalenceStandardMap.get(nc) == null
- && defaultSuperMap.get(nc) == null || showingEquivalentSuggestions && showingMultiTables
- && defaultSuperMap.get(nc) == null || !showingEquivalentSuggestions
- && owlSuperStandardMap.get(nc) == null || !showingEquivalentSuggestions && showingMultiTables) {
- nextFinishButton.setText("Finish");
- nextFinishButton.setActionCommand("finish");
- }
-
- }
- }
-
- @Override
- public void valueChanged(ListSelectionEvent e) {
- if (!e.getValueIsAdjusting() && defaultTab.getSelectedRow() >= 0) {
- EvaluatedDescriptionClass cl = defaultTab.getSelectedValue();
- showInconsistencyWarning(!cl.isConsistent());
- graphPanel.setNewClassDescription(cl);
- if(defaultTab.getSelectedClassExpression() != null){
- bg.clearSelection();
- }
-
- }
-
- }
-
-
- @Override
- public void mouseDragged(MouseEvent e) {
-
- }
-
- @Override
- public void mouseMoved(MouseEvent e) {
- if (e.getSource() instanceof ResultTable) {
- ResultTable result = ((ResultTable) e.getSource());
- int column = result.columnAtPoint(e.getPoint());
- int row = result.rowAtPoint(e.getPoint());
-
- if (column == 0 && row >= 0) {
- if (mouseOverTable != result || row != oldRow) {
- mouseOverTable = result;
- oldRow = row;
- EvaluatedDescriptionClass ec = result.getValueAtRow(row);
- graphPanel2.clear();
- graphPanel2.setNewClassDescription(ec);
- setCoverageLocationRelativeTo(result);
- showCoveragePanel(true);
- } else {
- showCoveragePanel(true);
- }
- } else {
- showCoveragePanel(false);
- }
- } else {
- showCoveragePanel(false);
- }
-
- }
-
- /**
- * @param args
- * @throws ComponentInitException
- * @throws MalformedURLException
- * @throws LearningProblemUnsupportedException
- * @throws UnsupportedLookAndFeelException
- * @throws IllegalAccessException
- * @throws InstantiationException
- * @throws ClassNotFoundException
- * @throws URISyntaxException
- */
- public static void main(String[] args) throws ComponentInitException,
- LearningProblemUnsupportedException, ClassNotFoundException, InstantiationException,
- IllegalAccessException, UnsupportedLookAndFeelException, URISyntaxException {
-
- UIManager.setLookAndFeel(new PlasticLookAndFeel());
-
- if (args.length == 0) {
- System.out.println("You need to give an file as argument.");
- System.exit(0);
- }
- final File input = new File(args[0]);
- SwingUtilities.invokeLater(new Runnable() {
-
- @Override
- public void run() {
- try {
- new EvaluationGUI(input);
- } catch (MalformedURLException e) {
- e.printStackTrace();
- } catch (ComponentInitException e) {
- e.printStackTrace();
- } catch (LearningProblemUnsupportedException e) {
- e.printStackTrace();
- }
-
- }
- });
-
- }
-
-
- class RatingTablePanel extends JPanel {
-
- /**
- *
- */
- private static final long serialVersionUID = 7408917327199664584L;
- private ResultTable table;
- private RatingPanel rating;
-
- public RatingTablePanel() {
- setLayout(new BorderLayout());
- setBorder(BorderFactory.createLineBorder(Color.BLACK));
- table = new ResultTable();
- table.getColumn(1).setCellRenderer(new MultiLineTableCellRenderer());
- table.setRowHeightEnabled(true);
- add(table, BorderLayout.CENTER);
- rating = new RatingPanel();
- add(rating, BorderLayout.EAST);
-
- }
-
- public void addResults(List<EvaluatedDescriptionClass> resultList) {
- table.addResults(resultList);
- }
-
- public void reset() {
- rating.clearSelection();
- }
-
- public int getRatingValue() {
- return rating.getSelectedValue();
- }
-
- public void addMouseMotionListener(MouseMotionListener mL) {
- rating.addMouseMotionListener(mL);
- table.addMouseMotionListener(mL);
- }
-
- }
-
- class RatingPanel extends JPanel {
-
- /**
- *
- */
- private static final long serialVersionUID = -111227945780885551L;
-
- private JRadioButton rb1 = new JRadioButton("1");
- private JRadioButton rb2 = new JRadioButton("2");;
- private JRadioButton rb3 = new JRadioButton("3");;
- private JRadioButton rb4 = new JRadioButton("4");;
- private JRadioButton rb5 = new JRadioButton("5");;
- private ButtonGroup bg;
- private ImageIcon thumbs_up = new ImageIcon(EvaluationGUI.class.getResource("Thumb_up.png"));
- private ImageIcon thumbs_down = new ImageIcon(EvaluationGUI.class.getResource("Thumb_down.png"));
-
- public RatingPanel() {
- setLayout(new GridLayout(7, 1));
- bg = new ButtonGroup();
-
- add(new JLabel(thumbs_up));
- add(rb5);
- add(rb4);
- add(rb3);
- add(rb2);
- add(rb1);
- add(new JLabel(thumbs_down));
- bg.add(rb1);
- bg.add(rb2);
- bg.add(rb3);
- bg.add(rb4);
- bg.add(rb5);
- rb1.setSelected(true);
- }
-
- public int getSelectedValue() {
- if (rb1.isSelected()) {
- return 1;
- } else if (rb2.isSelected()) {
- return 2;
- } else if (rb3.isSelected()) {
- return 3;
- } else if (rb4.isSelected()) {
- return 4;
- } else {
- return 5;
- }
- }
-
- public void clearSelection() {
- rb1.setSelected(true);
- }
-
- }
-
-}
-
-class MultiLineTableCellRenderer extends JTextPane implements TableCellRenderer{
-
- /**
- *
- */
-private static final long serialVersionUID = -5375479462711405013L;
- protected static Border noFocusBorder = new EmptyBorder(1, 1, 1, 1);
-
- private StringWriter buffer;
- private TextBlockWriter writer;
- private ManchesterSyntaxObjectRenderer renderer;
-
- private StyledDocument doc;
- Style style;
- public MultiLineTableCellRenderer() {
- super();
-
-
- setContentType("text/html");
- setBorder(noFocusBorder);
-
- buffer = new StringWriter();
- writer = new TextBlockWriter(buffer);
- renderer = new ManchesterSyntaxObjectRenderer(writer);
- renderer.setWrapLines( false );
- renderer.setSmartIndent( true );
-
-
- doc = (StyledDocument)getDocument();
- style = doc.addStyle("StyleName", null);
- StyleConstants.setItalic(style, true);
-
-
-
- }
-
-
- public Component getTableCellRendererComponent(JTable table,
- Object value,
- boolean isSelected,
- boolean hasFocus,
- int row,
- int column)
- {
- if (isSelected)
- {
- super.setForeground(table.getSelectionForeground());
- super.setBackground(table.getSelectionBackground());
- }
- else
- {
- super.setForeground(table.getForeground());
- super.setBackground(table.getBackground());
- }
-
- setFont(table.getFont());
-
- if (hasFocus)
- {
- setBorder(UIManager.getBorder("Table.focusCellHighlightBorder"));
- if (!isSelected && table.isCellEditable(row, column))
- {
- Color col;
- col = UIManager.getColor("Table.focusCellForeground");
- if (col != null)
- {
- super.setForeground(col);
- }
- col = UIManager.getColor("Table.focusCellBackground");
- if (col != null)
- {
- super.setBackground(col);
- }
- }
- }
- else
- {
- setBorder(noFocusBorder);
- }
-
- setEnabled(table.isEnabled());
-
- setValue(table, row, column, value);
-
- return this;
- }
-
- protected void setValue(JTable table, int row, int column, Object value)
- {
- if (value != null)
- {
- String text = value.toString();
- setText(text);
-
- if(value instanceof Description){
- OWLClassExpression desc = OWLAPIDescriptionConvertVisitor.getOWLClassExpression((Description)value);
- desc.accept(renderer);
-
- writer.flush();
- String newAxiom = buffer.toString();
-
- StringTokenizer st = new StringTokenizer(newAxiom);
-
- StringBuffer bf = new StringBuffer();
- bf.append("<html>");
-
- String token;
- while(st.hasMoreTokens()){
- token = st.nextToken();
-
- String color = "black";
-
- boolean isReserved = false;
- if(!token.equals("type") && !token.equals("subClassOf")){
- for(Keyword key : Keyword.values()){
- if(token.equals(key.getLabel())){
- color = key.getColor();
- isReserved = true;break;
- }
- }
- }
- if(isReserved){
- bf.append("<b><font color=" + color + ">" + token + " </font></b>");
- } else {
- bf.append(" " + token + " ");
- }
- }
- bf.append("</html>");
- newAxiom = bf.toString();
- setText(newAxiom);
-// oldAxioms.add(buffer.toString());
- buffer.getBuffer().delete(0, buffer.toString().length());
- }
-
-
- View view = getUI().getRootView(this);
- view.setSize((float) table.getColumnModel().getColumn(column).getWidth() - 3, -1);
- float y = view.getPreferredSpan(View.Y_AXIS);
- int h = (int) Math.ceil(y + 3);
-
- if (table.getRowHeight(row) != h)
- {
- table.setRowHeight(row, h );
- }
- }
- else
- {
- setText("");
- }
- }
-
-}
Modified: trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -77,6 +77,7 @@
private static long reasonerTaskTimeoutInMinutes = 10;
+ @SuppressWarnings("unchecked")
public static void main(String[] args) throws ComponentInitException, MalformedURLException {
Map<String, Integer> ontologyRelClassCountMap = new HashMap<String, Integer>();
Set<String> inconsistentOntologies = new HashSet<String>();
@@ -242,6 +243,7 @@
}
+ @SuppressWarnings("unchecked")
static Map sortByValue(Map map) {
List list = new LinkedList(map.entrySet());
Collections.sort(list, new Comparator() {
Modified: trunk/src/dl-learner/org/dllearner/scripts/evaluation/StatsGenerator.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/evaluation/StatsGenerator.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/StatsGenerator.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -343,6 +343,7 @@
latexMetrics.append("\\hline\n");
}
+ @SuppressWarnings("static-access")
private void addStatsTableRow() {
double accept = acceptedGlobalStat.getMean() / suggestionListsCount * 100;
double reject = rejectedGlobalStat.getMean() / suggestionListsCount * 100;
@@ -355,6 +356,7 @@
double stdDeviationPosition = positionStat.getStandardDeviation();
DecimalFormat df = new DecimalFormat("0.0");
double additionalInstanceCountEq = new Stat(moreInstancesCountStats).getMean();
+ @SuppressWarnings("unused")
double additionalInstanceCountSC = new Stat(moreInstancesCountStatsSC).getMean();
double additionalInstanceCount = new Stat(new Stat(moreInstancesCountStats), new Stat(moreInstancesCountStatsSC)).getMean();
Stat avgSelectedAccuracyEq = new Stat(accSelectedStats);
@@ -409,6 +411,7 @@
* Loads the computed suggestion files.
* @param resultFile The file where the suggestions are serialized.
*/
+ @SuppressWarnings("unchecked")
private void loadSuggestions(File resultFile) {
InputStream fis = null;
@@ -438,6 +441,7 @@
* Loads the user input evaluated in the EvaluationGUI.
* @param input
*/
+ @SuppressWarnings("unchecked")
private void loadUserInput(File input) {
InputStream fis = null;
Modified: trunk/src/dl-learner/org/dllearner/scripts/improveWikipedia/ConceptSelector.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/improveWikipedia/ConceptSelector.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/improveWikipedia/ConceptSelector.java 2010-05-31 13:19:41 UTC (rev 2156)
@@ -52,7 +52,6 @@
return getConceptsNotContainingString(concepts, "OR");
}
- @SuppressWarnings("unchecked")
public List<EvaluatedDescriptionPosNeg> getConceptsNotContainingString(
List<EvaluatedDescriptionPosNeg> concepts, String filterString,
int limitSize) {
Modified: trunk/src/dl-learner/org/dllearner/scripts/matching/DBpediaLinkedGeoData.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/matching/DBpediaLinkedGeoData.java 2010-05-27 16:45:38 UTC (rev 2155)
+++ trunk/src/dl-learner/org/dllearner/scripts/matching/DBpediaLinkedGeoData.java 2010-05-31 13:19:41 UTC (rev 2156)
@...
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