From: <lor...@us...> - 2010-05-16 15:27:27
|
Revision: 2146 http://dl-learner.svn.sourceforge.net/dl-learner/?rev=2146&view=rev Author: lorenz_b Date: 2010-05-16 15:27:19 +0000 (Sun, 16 May 2010) Log Message: ----------- 2 bugfixes for evaluation plugin. Added latest Pellet libs 2.1.1. Updated list and output for Tones and Protege repository ontologies. Modified Paths: -------------- trunk/lib/pellet/pellet-core.jar trunk/lib/pellet/pellet-datatypes.jar trunk/lib/pellet/pellet-el.jar trunk/lib/pellet/pellet-explanation.jar trunk/lib/pellet/pellet-modularity.jar trunk/lib/pellet/pellet-owlapiv3.jar trunk/lib/pellet/pellet-query.jar trunk/lib/pellet/pellet-rules.jar trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_ontologies.txt trunk/src/dl-learner/org/dllearner/tools/evaluationplugin/GraphicalCoveragePanel.java trunk/src/dl-learner/org/dllearner/tools/evaluationplugin/META-INF/MANIFEST.MF Added Paths: ----------- trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_output.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_output.txt Removed Paths: ------------- trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies_output.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_errors.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_list.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_ontologies_output.txt trunk/src/dl-learner/org/dllearner/scripts/evaluation/tones_tractable.txt Modified: trunk/lib/pellet/pellet-core.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-datatypes.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-el.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-explanation.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-modularity.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-owlapiv3.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-query.jar =================================================================== (Binary files differ) Modified: trunk/lib/pellet/pellet-rules.jar =================================================================== (Binary files differ) Modified: trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java =================================================================== --- trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java 2010-05-14 16:02:25 UTC (rev 2145) +++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/OntologyChecker.java 2010-05-16 15:27:19 UTC (rev 2146) @@ -20,13 +20,21 @@ package org.dllearner.scripts.evaluation; import java.io.BufferedReader; +import java.io.BufferedWriter; import java.io.File; import java.io.FileReader; +import java.io.FileWriter; import java.io.IOException; import java.net.MalformedURLException; +import java.util.Collections; +import java.util.Comparator; import java.util.HashMap; import java.util.HashSet; import java.util.Hashtable; +import java.util.Iterator; +import java.util.LinkedHashMap; +import java.util.LinkedList; +import java.util.List; import java.util.Map; import java.util.Set; import java.util.Map.Entry; @@ -40,8 +48,15 @@ import org.semanticweb.owlapi.model.OWLOntology; import org.semanticweb.owlapi.model.OWLOntologyCreationException; import org.semanticweb.owlapi.model.OWLOntologyManager; +import org.semanticweb.owlapi.reasoner.ConsoleProgressMonitor; +import org.semanticweb.owlapi.reasoner.FreshEntityPolicy; +import org.semanticweb.owlapi.reasoner.IndividualNodeSetPolicy; +import org.semanticweb.owlapi.reasoner.OWLReasoner; +import org.semanticweb.owlapi.reasoner.OWLReasonerConfiguration; +import org.semanticweb.owlapi.reasoner.ReasonerProgressMonitor; +import org.semanticweb.owlapi.reasoner.SimpleConfiguration; +import org.semanticweb.owlapi.reasoner.TimeOutException; -import com.clarkparsia.pellet.owlapiv3.PelletReasoner; import com.clarkparsia.pellet.owlapiv3.PelletReasonerFactory; /** @@ -59,6 +74,8 @@ private static boolean displayInstances = true; // set to Integer.MAX_VALUE for displaying all instances private static int maxInstances = 10; + + private static long reasonerTaskTimeoutInMinutes = 10; public static void main(String[] args) throws ComponentInitException, MalformedURLException { Map<String, Integer> ontologyRelClassCountMap = new HashMap<String, Integer>(); @@ -67,9 +84,12 @@ File file = new File(args[0]); OWLOntologyManager manager = OWLManager.createOWLOntologyManager(); - PelletReasoner reasoner; + OWLReasoner reasoner; + ReasonerProgressMonitor progressMonitor = new ConsoleProgressMonitor(); + FreshEntityPolicy freshEntityPolicy = FreshEntityPolicy.ALLOW; + IndividualNodeSetPolicy individualNodeSetPolicy = IndividualNodeSetPolicy.BY_SAME_AS; + OWLReasonerConfiguration conf = new SimpleConfiguration(progressMonitor, freshEntityPolicy, reasonerTaskTimeoutInMinutes * 60000, individualNodeSetPolicy); OWLOntology ontology; - Set<OWLOntology> ontologies = new HashSet<OWLOntology>(); StringBuffer sb = new StringBuffer(); StringBuffer sb2 = new StringBuffer(); String url = null; @@ -79,11 +99,15 @@ int count = 1; while ((url = in.readLine()) != null) { try { + if(url.startsWith("#")){ + continue; + } + url = url.replace("%26", "&"); + url = url.replace("%3D", "="); System.out.println(count++ + ":" + url); + manager = null; + manager = OWLManager.createOWLOntologyManager(); ontology = manager.loadOntology(IRI.create(url)); - ontologies.add(ontology); - ontologies.addAll(manager.getImportsClosure(ontology)); - reasoner = new PelletReasonerFactory().createReasoner(ontology); sb.append(url + "\n"); sb.append("#logical axioms: " + ontology.getLogicalAxiomCount() + "\n"); sb2.append(ontology.getLogicalAxiomCount() + "\t"); @@ -96,55 +120,63 @@ sb.append("#individuals: " + ontology.getIndividualsInSignature(true).size() + "\n"); sb2.append(url + "\t"); - if (reasoner.isConsistent()) { - long startTime = System.currentTimeMillis(); - reasoner.prepareReasoner(); - sb.append("classification time in ms: " + (System.currentTimeMillis() - startTime) + "\n"); - int unsatCount = reasoner.getUnsatisfiableClasses().getEntitiesMinusBottom().size(); - sb.append("#unsatisfiable classes: " + unsatCount + "\n"); - if(unsatCount > 0){ - incohaerentOntologies.put(url, Integer.valueOf(unsatCount)); - } - - int classCount = 0; - - StringBuffer tmp = new StringBuffer(); - if (ontology.getIndividualsInSignature(true).size() > 0) { - for (OWLClass cl : ontology.getClassesInSignature(true)) { - Set<OWLNamedIndividual> inds = reasoner.getInstances(cl, false).getFlattened(); - if (inds.size() >= minInstanceCount) { - classCount++; - tmp.append(" " + cl.getIRI() + "\n"); - if(displayInstances) { - int indCount = 0; - for(OWLIndividual ind : inds) { - tmp.append(" " + ind.toString() + "\n"); - indCount++; - if(indCount >= maxInstances) { - tmp.append(" ... " + inds.size() + " more\n"); - break; + if(ontology.getIndividualsInSignature(true).size() > 0){ + //Pellet + reasoner = PelletReasonerFactory.getInstance().createReasoner(ontology, conf); + //HermiT +// reasoner = new Reasoner(ontology); + if (reasoner.isConsistent()) { + long startTime = System.currentTimeMillis(); + reasoner.prepareReasoner(); + sb.append("classification time in ms: " + (System.currentTimeMillis() - startTime) + "\n"); + int unsatCount = reasoner.getUnsatisfiableClasses().getEntitiesMinusBottom().size(); + sb.append("#unsatisfiable classes: " + unsatCount + "\n"); + if(unsatCount > 0){ + incohaerentOntologies.put(url, Integer.valueOf(unsatCount)); + } + + int classCount = 0; + + StringBuffer tmp = new StringBuffer(); + if (ontology.getIndividualsInSignature(true).size() > 0) { + for (OWLClass cl : ontology.getClassesInSignature(true)) { + if(!cl.isOWLThing()){ + Set<OWLNamedIndividual> inds = reasoner.getInstances(cl, false).getFlattened(); + if (inds.size() >= minInstanceCount) { + classCount++; + tmp.append(" " + cl.getIRI() + "\n"); + if(displayInstances) { + int indCount = 0; + for(OWLIndividual ind : inds) { + tmp.append(" " + ind.toString() + "\n"); + indCount++; + if(indCount >= maxInstances) { + tmp.append(" ... " + (inds.size()-maxInstances+1) + " more\n"); + break; + } + } } - } + } } } } + + sb.append("#classes with min. " + minInstanceCount + " individuals: " + classCount + "\n"); + if(displayClasses) { + sb.append(tmp); + } + ontologyRelClassCountMap.put(url, classCount); + } else { + inconsistentOntologies.add(url); + sb.append("Ontology is inconsistent. \n"); } - - sb.append("#classes with min. " + minInstanceCount + " individuals: " + classCount + "\n"); - if(displayClasses) { - sb.append(tmp); - } - ontologyRelClassCountMap.put(url, classCount); - } else { - inconsistentOntologies.add(url); - sb.append("Ontology is inconsistent. \n"); + reasoner.dispose(); } sb.append("++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ \n"); sb2.append("\n"); - reasoner.dispose(); + manager.removeOntology(ontology); - ontologies.clear(); System.out.println(inconsistentOntologies.size() + " inconsistent ontologies:"); int cnt = 1; for(String uri : inconsistentOntologies){ @@ -158,28 +190,72 @@ } System.out.println(); } catch (OWLOntologyCreationException e) { - // TODO Auto-generated catch block + sb.append(url + "\n"); + sb.append("ERROR: Could not load ontology."); e.printStackTrace(); + } catch (TimeOutException e){ + sb.append(url + "\n"); + sb.append("TIMEOUT: Some reasoning tasks are too complex."); + e.printStackTrace(); } } } catch (IOException e) { e.printStackTrace(); } - - System.out.println(sb.toString()); - System.out.println(sb2.toString()); - for (Entry<String, Integer> ent : ontologyRelClassCountMap.entrySet()) { - System.out.println(ent.getValue() + "\t - \t" + ent.getKey()); +// +// System.out.println(sb.toString()); +// System.out.println(sb2.toString()); +// for (Entry<String, Integer> ent : ontologyRelClassCountMap.entrySet()) { +// System.out.println(ent.getValue() + "\t - \t" + ent.getKey()); +// } +// System.out.println("Inconsistent ontologies:"); +// for(String uri : inconsistentOntologies){ +// System.out.println(uri); +// } +// System.out.println("Incohaerent ontologies(#unsatisfiable classes):"); +// for (Entry<String, Integer> ent : incohaerentOntologies.entrySet()) { +// System.out.println(ent.getKey() + "(" + ent.getValue() + ")"); +// } + BufferedWriter out; + try { + out = new BufferedWriter(new FileWriter("protege_output.txt")); + out.write(sb.toString()); + out.write(sb2.toString()); + out.write("\n"); + ontologyRelClassCountMap = sortByValue(ontologyRelClassCountMap); + for (Entry<String, Integer> ent : ontologyRelClassCountMap.entrySet()) { + out.write(ent.getValue() + "\t - \t" + ent.getKey() + "\n"); + } + out.write("Inconsistent ontologies:\n"); + for(String uri : inconsistentOntologies){ + out.write(uri + "\n"); + } + out.write("Incohaerent ontologies(#unsatisfiable classes):\n"); + for (Entry<String, Integer> ent : incohaerentOntologies.entrySet()) { + out.write(ent.getKey() + "(" + ent.getValue() + ")\n"); + } + out.close(); + } catch (IOException e) { + e.printStackTrace(); } - System.out.println("Inconsistent ontologies:"); - for(String uri : inconsistentOntologies){ - System.out.println(uri); + + } + + static Map sortByValue(Map map) { + List list = new LinkedList(map.entrySet()); + Collections.sort(list, new Comparator() { + public int compare(Object o1, Object o2) { + return ((Comparable) ((Map.Entry) (o1)).getValue()).compareTo(((Map.Entry) (o2)).getValue()); + } + }); + Map result = new LinkedHashMap(); + for (Iterator it = list.iterator(); it.hasNext();) { + Map.Entry entry = (Map.Entry) it.next(); + result.put(entry.getKey(), entry.getValue()); } - System.out.println("Incohaerent ontologies(#unsatisfiable classes):"); - for (Entry<String, Integer> ent : incohaerentOntologies.entrySet()) { - System.out.println(ent.getKey() + "(" + ent.getValue() + ")"); - } + return result; } + } Modified: trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies.txt =================================================================== --- trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies.txt 2010-05-14 16:02:25 UTC (rev 2145) +++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies.txt 2010-05-16 15:27:19 UTC (rev 2146) @@ -25,7 +25,7 @@ http://www.tssg.org/public/ontologies/omg/mof/2004/MOF.owl http://www.tssg.org/public/ontologies/omg/qvt/2005/QVT.owl http://www.tssg.org/public/ontologies/omg/odm/2006/odm_2006_04_03_kludge.owl -http://www.tssg.org/public/ontologies/omg/uml/2004/UML2-Super-MDL-041007.owl +#http://www.tssg.org/public/ontologies/omg/uml/2004/UML2-Super-MDL-041007.owl http://protege.cim3.net/file/pub/ontologies/people.pets/people+pets.owl http://swap.uib.es/ontologies/performance.owl http://philosurfical.open.ac.uk/ontology/philosurfical.owl @@ -41,4 +41,5 @@ http://protege.cim3.net/file/pub/ontologies/travel/travel.owl http://lsi.ugr.es/joseluisgs/videojuegos.owl http://protege.cim3.net/file/pub/ontologies/wine/wine.owl +http://abulaish.com/Wood_Ontology/woodontology.xml http://drtc.isibang.ac.in/%7Ebisu/ontology/instOntology.owl \ No newline at end of file Deleted: trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies_output.txt =================================================================== --- trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies_output.txt 2010-05-14 16:02:25 UTC (rev 2145) +++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_ontologies_output.txt 2010-05-16 15:27:19 UTC (rev 2146) @@ -1,356 +0,0 @@ -http://www.biopax.org/release/biopax-level2.owl -#logical axioms: 338 -#classes: 40 -#object properties: 35 -#data properties: 39 -#individuals: 0 -classification time in ms: 144 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.ifomis.org/bfo/owl -#logical axioms: 95 -#classes: 39 -#object properties: 2 -#data properties: 2 -#individuals: 0 -classification time in ms: 198 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.acl.icnet.uk/~mw/MDM0.73.owl -#logical axioms: 878 -#classes: 196 -#object properties: 24 -#data properties: 5 -#individuals: 113 -classification time in ms: 478 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 31 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.co-ode.org/ontologies/amino-acid/2005/10/11/amino-acid.owl -#logical axioms: 469 -#classes: 54 -#object properties: 16 -#data properties: 3 -#individuals: 1 -classification time in ms: 527 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://transontology.org/bhakti_gaudiya/bhakti.owl -#logical axioms: 52 -#classes: 47 -#object properties: 4 -#data properties: 11 -#individuals: 0 -classification time in ms: 272 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/camera/camera.owl -#logical axioms: 48 -#classes: 12 -#object properties: 9 -#data properties: 10 -#individuals: 2 -classification time in ms: 9 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.bltk.ru/OWL/camera2.owl -#logical axioms: 346 -#classes: 37 -#object properties: 14 -#data properties: 55 -#individuals: 67 -Ontology is inconsistent. -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://transontology.org/consciousness/consciousness1.owl -#logical axioms: 119 -#classes: 29 -#object properties: 14 -#data properties: 2 -#individuals: 14 -classification time in ms: 76 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 1 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://on.cs.unibas.ch/owl/1.0/Context.owl -#logical axioms: 54 -#classes: 9 -#object properties: 16 -#data properties: 12 -#individuals: 5 -classification time in ms: 12 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.ecs.soton.ac.uk/%7Eaoj04r/resist.owl -#logical axioms: 240 -#classes: 348 -#object properties: 136 -#data properties: 41 -#individuals: 76 -classification time in ms: 1580 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 15 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.csm.ornl.gov/%7E7lp/esg-owl/ESG1.1.owl -#logical axioms: 398 -#classes: 36 -#object properties: 30 -#data properties: 37 -#individuals: 44 -classification time in ms: 199 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 4 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.fadyart.com/ontologies/data/Finance.owl -#logical axioms: 16014 -#classes: 322 -#object properties: 249 -#data properties: 76 -#individuals: 2466 -classification time in ms: 352 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 111 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/generations/generations.owl -#logical axioms: 38 -#classes: 18 -#object properties: 6 -#data properties: 2 -#individuals: 7 -classification time in ms: 53 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 1 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://i2geo.net/ontologies/current/GeoSkills.owl -#logical axioms: 16781 -#classes: 595 -#object properties: 25 -#data properties: 23 -#individuals: 2572 -classification time in ms: 18544 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 167 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/ka/ka.owl -#logical axioms: 216 -#classes: 96 -#object properties: 62 -#data properties: 34 -#individuals: 0 -classification time in ms: 125 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/koala/koala.owl -#logical axioms: 42 -#classes: 20 -#object properties: 6 -#data properties: 3 -#individuals: 6 -classification time in ms: 31 -#unsatisfiable classes: 3 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://lifeeventontology.googlepages.com/leo.owl -#logical axioms: 356 -#classes: 32 -#object properties: 28 -#data properties: 16 -#individuals: 62 -classification time in ms: 33 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 7 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://mged.sourceforge.net/ontologies/MGEDOntology.owl -#logical axioms: 1387 -#classes: 235 -#object properties: 88 -#data properties: 50 -#individuals: 712 -classification time in ms: 142437 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 80 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.tssg.org/public/ontologies/omg/mof/2004/MOF.owl -#logical axioms: 0 -#classes: 65 -#object properties: 145 -#data properties: 8 -#individuals: 35 -classification time in ms: 93 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.tssg.org/public/ontologies/omg/qvt/2005/QVT.owl -#logical axioms: 0 -#classes: 149 -#object properties: 230 -#data properties: 8 -#individuals: 45 -classification time in ms: 361 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.tssg.org/public/ontologies/omg/odm/2006/odm_2006_04_03_kludge.owl -#logical axioms: 0 -#classes: 123 -#object properties: 135 -#data properties: 29 -#individuals: 42 -classification time in ms: 258 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 2 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/people.pets/people+pets.owl -#logical axioms: 105 -#classes: 59 -#object properties: 16 -#data properties: 3 -#individuals: 21 -classification time in ms: 143 -#unsatisfiable classes: 1 -#classes with min. 5 individuals: 4 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://swap.uib.es/ontologies/performance.owl -#logical axioms: 80 -#classes: 2412 -#object properties: 242 -#data properties: 44 -#individuals: 193 -classification time in ms: 12456 -#unsatisfiable classes: 2 -#classes with min. 5 individuals: 57 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://philosurfical.open.ac.uk/ontology/philosurfical.owl -#logical axioms: 1465 -#classes: 377 -#object properties: 315 -#data properties: 2 -#individuals: 0 -classification time in ms: 252 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/shuttle/shuttle-crew-ont.owl -#logical axioms: 95 -#classes: 46 -#object properties: 53 -#data properties: 32 -#individuals: 55 -classification time in ms: 82 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 2 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.loria.fr/%7Ecoulet/ontology/snpontology/version1.3/snpontology_full.owl -#logical axioms: 279 -#classes: 113 -#object properties: 64 -#data properties: 14 -#individuals: 4 -classification time in ms: 38372 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.uv.es/%7Eagentes/SVECore.owl -#logical axioms: 134 -#classes: 20 -#object properties: 13 -#data properties: 25 -#individuals: 0 -classification time in ms: 34 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/tambis/tambis-full.owl -#logical axioms: 596 -#classes: 394 -#object properties: 101 -#data properties: 3 -#individuals: 0 -classification time in ms: 1425 -#unsatisfiable classes: 144 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://www.bltk.ru/OWL/tourism.owl -#logical axioms: 417 -#classes: 76 -#object properties: 28 -#data properties: 29 -#individuals: 57 -Ontology is inconsistent. -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/travel/travel.owl -#logical axioms: 93 -#classes: 34 -#object properties: 8 -#data properties: 6 -#individuals: 14 -classification time in ms: 55 -#unsatisfiable classes: 1 -#classes with min. 5 individuals: 1 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://lsi.ugr.es/joseluisgs/videojuegos.owl -#logical axioms: 517 -#classes: 114 -#object properties: 14 -#data properties: 2 -#individuals: 0 -classification time in ms: 48140 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 0 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ -http://protege.cim3.net/file/pub/ontologies/wine/wine.owl -#logical axioms: 657 -#classes: 137 -#object properties: 18 -#data properties: 3 -#individuals: 206 -classification time in ms: 12675 -#unsatisfiable classes: 0 -#classes with min. 5 individuals: 41 -++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - -1 - http://protege.cim3.net/file/pub/ontologies/generations/generations.owl -4 - http://www.csm.ornl.gov/%7E7lp/esg-owl/ESG1.1.owl -0 - http://www.tssg.org/public/ontologies/omg/mof/2004/MOF.owl -2 - http://protege.cim3.net/file/pub/ontologies/shuttle/shuttle-crew-ont.owl -167 - http://i2geo.net/ontologies/current/GeoSkills.owl -0 - http://lsi.ugr.es/joseluisgs/videojuegos.owl -2 - http://www.tssg.org/public/ontologies/omg/odm/2006/odm_2006_04_03_kludge.owl -31 - http://www.acl.icnet.uk/~mw/MDM0.73.owl -7 - http://lifeeventontology.googlepages.com/leo.owl -111 - http://www.fadyart.com/ontologies/data/Finance.owl -0 - http://philosurfical.open.ac.uk/ontology/philosurfical.owl -0 - http://www.tssg.org/public/ontologies/omg/qvt/2005/QVT.owl -1 - http://protege.cim3.net/file/pub/ontologies/travel/travel.owl -1 - http://transontology.org/consciousness/consciousness1.owl -0 - http://on.cs.unibas.ch/owl/1.0/Context.owl -15 - http://www.ecs.soton.ac.uk/%7Eaoj04r/resist.owl -0 - http://www.loria.fr/%7Ecoulet/ontology/snpontology/version1.3/snpontology_full.owl -0 - http://www.biopax.org/release/biopax-level2.owl -57 - http://swap.uib.es/ontologies/performance.owl -0 - http://protege.cim3.net/file/pub/ontologies/tambis/tambis-full.owl -0 - http://protege.cim3.net/file/pub/ontologies/ka/ka.owl -0 - http://www.uv.es/%7Eagentes/SVECore.owl -41 - http://protege.cim3.net/file/pub/ontologies/wine/wine.owl -0 - http://protege.cim3.net/file/pub/ontologies/camera/camera.owl -0 - http://transontology.org/bhakti_gaudiya/bhakti.owl -0 - http://www.ifomis.org/bfo/owl -0 - http://www.co-ode.org/ontologies/amino-acid/2005/10/11/amino-acid.owl -4 - http://protege.cim3.net/file/pub/ontologies/people.pets/people+pets.owl -80 - http://mged.sourceforge.net/ontologies/MGEDOntology.owl -0 - http://protege.cim3.net/file/pub/ontologies/koala/koala.owl -Inconsistent ontologies: -http://www.bltk.ru/OWL/tourism.owl -http://www.bltk.ru/OWL/camera2.owl -Incohaerent ontologies(#unsatisfiable classes): -http://protege.cim3.net/file/pub/ontologies/people.pets/people+pets.owl(1) -http://protege.cim3.net/file/pub/ontologies/koala/koala.owl(3) -http://protege.cim3.net/file/pub/ontologies/travel/travel.owl(1) -http://swap.uib.es/ontologies/performance.owl(2) -http://protege.cim3.net/file/pub/ontologies/tambis/tambis-full.owl(144) \ No newline at end of file Added: trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_output.txt =================================================================== --- trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_output.txt (rev 0) +++ trunk/src/dl-learner/org/dllearner/scripts/evaluation/protege_output.txt 2010-05-16 15:27:19 UTC (rev 2146) @@ -0,0 +1,2454 @@ +http://www.biopax.org/release/biopax-level2.owl +#logical axioms: 343 +#classes: 42 +#object properties: 33 +#data properties: 37 +#individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.ifomis.org/bfo/owl +#logical axioms: 95 +#classes: 39 +#object properties: 0 +#data properties: 0 +#individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.acl.icnet.uk/~mw/MDM0.73.owl +#logical axioms: 878 +#classes: 196 +#object properties: 22 +#data properties: 3 +#individuals: 112 +classification time in ms: 406 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 31 + http://acl/BMV#Tamoxifen + <http://acl/BMV#TamFgt5Yr> + <http://acl/BMV#Tam30mg> + <http://acl/BMV#TamD2Yr> + <http://acl/BMV#TamE5Yr> + <http://acl/BMV#TamA20mg> + <http://acl/BMV#TamC40mg> + http://acl/BMV#EarlyBreastCancer + <http://acl/BMV#ProtoERPosLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNNegStage1BrCa> + <http://acl/BMV#ProtoERNegLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNPosStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage2BrCa> + http://acl/BMV#Outcomes + <http://acl/BMV#DecreasedBrCaDFS0.8> + <http://acl/BMV#IncreasedRiskGastricCa3.0> + <http://acl/BMV#IncreasedRiskGastricCa3.2> + <http://acl/BMV#DecreasedBrCaDFS0.5> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#NoChangeRiskEndometrialAbnormality1> + <http://acl/BMV#IncreasedLumbarBMD1.012> + <http://acl/BMV#DecreasedRiskBrCa0.55> + <http://acl/BMV#DecreasedRiskBrCa0.6> + <http://acl/BMV#IncreasedOS1.2> + ... 50 more + http://acl/BMV#BiologicalLevels + <http://acl/BMV#PlasmaPlatelet> + <http://acl/BMV#PlasmaLDL> + <http://acl/BMV#LumbarBMDLevel> + <http://acl/BMV#PlasmaCholesterolInst> + <http://acl/BMV#RadialBMDLevel> + <http://acl/BMV#PlasmaFibrinogen> + http://acl/BMV#MedicalIntervention + <http://acl/BMV#TamFgt5Yr> + <http://acl/BMV#ProtoPFTChemoTam> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoPAFTChemoTam> + <http://acl/BMV#TamC40mg> + <http://acl/BMV#ProtoMFTChemoTam> + <http://acl/BMV#ProtoClonidine> + <http://acl/BMV#ProtoLateCMFTChemTam> + <http://acl/BMV#Tam30mg> + <http://acl/BMV#TamD2Yr> + ... 5 more + http://acl/BMV#ChangeRiskEndometrialAbnormality + <http://acl/BMV#IncreasedRiskEndometrialCancer6.4> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.0> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.53> + <http://acl/BMV#IncreasedRiskEndometrialCancer4.1> + <http://acl/BMV#NoChangeRiskEndometrialAbnormality1> + <http://acl/BMV#IncreasedRiskEndometrialCancer7.5> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.3> + http://acl/BMV#Abstract + <http://acl/BMV#ProtoEndoAbnormality> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoLNNeg> + <http://acl/BMV#IncreasedLumbarBMD1.012> + <http://acl/BMV#DecreasedRiskBrCa0.55> + <http://acl/BMV#PlasmaLDL> + <http://acl/BMV#DecreasedRiskBrCa0.6> + <http://acl/BMV#IncreasedOS1.2> + <http://acl/BMV#IncreasedOS1.1> + <http://acl/BMV#IncreasedRiskPersistentSideEffects2.3> + ... 102 more + http://acl/BMV#HormoneRARegimeTypes + <http://acl/BMV#TamFgt5Yr> + <http://acl/BMV#Tam30mg> + <http://acl/BMV#TamD2Yr> + <http://acl/BMV#TamE5Yr> + <http://acl/BMV#TamA20mg> + <http://acl/BMV#TamC40mg> + http://acl/BMV#IncreasedBrCaDFS + <http://acl/BMV#IncreasedBrCaDFS1.1> + <http://acl/BMV#IncreasedBrCaDFS1.2> + <http://acl/BMV#IncreasedBrCaDFS1.3> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#IncreasedBrCaDFS1.05> + <http://acl/BMV#IncreasedBrCaDFS1.x> + <http://acl/BMV#IncreasedBrCaDFS1.5> + <http://acl/BMV#IncreasedBrCaDFS1.21> + <http://acl/BMV#IncreasedBrCaDFS1.7> + http://acl/BMV#IncreasedRiskEndometrialCancer + <http://acl/BMV#IncreasedRiskEndometrialCancer6.4> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.0> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.53> + <http://acl/BMV#IncreasedRiskEndometrialCancer4.1> + <http://acl/BMV#IncreasedRiskEndometrialCancer7.5> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.3> + http://acl/BMV#ChangeLumbarBMD + <http://acl/BMV#IncreasedLumbarBMD1.006> + <http://acl/BMV#DecreasedLumbarBMD0.986> + <http://acl/BMV#DecreasedLumbarBMD0.993> + <http://acl/BMV#IncreasedLumbarBMD1.008> + <http://acl/BMV#IncreasedLumbarBMD1.012> + http://acl/BMV#CancerTypes + <http://acl/BMV#ProtoERPosLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage1BrCa> + <http://acl/BMV#ProtoGastricCa> + <http://acl/BMV#ProtoColorectalCa> + <http://acl/BMV#ProtoERPosLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNNegStage1BrCa> + <http://acl/BMV#ProtoEndoCa> + <http://acl/BMV#ProtoERNegLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNPosStage2BrCa> + ... 2 more + http://acl/BMV#TherapeuticType + <http://acl/BMV#TamFgt5Yr> + <http://acl/BMV#ProtoPFTChemoTam> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoPAFTChemoTam> + <http://acl/BMV#TamC40mg> + <http://acl/BMV#ProtoMFTChemoTam> + <http://acl/BMV#ProtoClonidine> + <http://acl/BMV#ProtoLateCMFTChemTam> + <http://acl/BMV#Tam30mg> + <http://acl/BMV#TamD2Yr> + ... 5 more + http://acl/BMV#ChangeBrCaDFS + <http://acl/BMV#DecreasedBrCaDFS0.8> + <http://acl/BMV#IncreasedBrCaDFS1.1> + <http://acl/BMV#IncreasedBrCaDFS1.2> + <http://acl/BMV#DecreasedBrCaDFS0.5> + <http://acl/BMV#IncreasedBrCaDFS1.3> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#IncreasedBrCaDFS1.05> + <http://acl/BMV#NoChangeBrCaDFS1> + <http://acl/BMV#IncreasedBrCaDFS1.x> + <http://acl/BMV#IncreasedBrCaDFS1.5> + ... 3 more + http://acl/BMV#AbsoluteRisk + <http://acl/BMV#RiskOvarianCyst0.06> + <http://acl/BMV#RiskCataracts0.14> + <http://acl/BMV#RiskEndometrialCa0.005> + <http://acl/BMV#RiskRetinopathy0.12> + <http://acl/BMV#RiskOvarianCyst0.11> + <http://acl/BMV#RiskEndometrialAbnormality3.9> + http://acl/BMV#BiologicalLevelBasedOutcomes + <http://acl/BMV#DecreasedLDL0.88> + <http://acl/BMV#IncreasedLumbarBMD1.006> + <http://acl/BMV#DecreasedPlasmaFibrinogenLevel0.85> + <http://acl/BMV#DecreasedLumbarBMD0.986> + <http://acl/BMV#NoChangeRadialBMD1.0> + <http://acl/BMV#DecreasedRadialBMD_NOS> + <http://acl/BMV#DecreasedLumbarBMD0.993> + <http://acl/BMV#DecreasedCholesterol0.88> + <http://acl/BMV#IncreasedLumbarBMD1.008> + <http://acl/BMV#DecreasedPlasmaPlateletCount0.92> + ... 2 more + http://acl/BMV#Risk + <http://acl/BMV#IncreasedRiskGastricCa3.0> + <http://acl/BMV#DecreasedBrCaDFS0.8> + <http://acl/BMV#DecreasedRiskHotFlushes0.8> + <http://acl/BMV#IncreasedRiskGastricCa3.2> + <http://acl/BMV#DecreasedBrCaDFS0.5> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#DecreasedRiskFatalMI0.37> + <http://acl/BMV#RiskOvarianCyst0.11> + <http://acl/BMV#NoChangeRiskEndometrialAbnormality1> + <http://acl/BMV#IncreasedRiskCataracts1.14> + ... 33 more + http://acl/BMV#ChangeRiskEndometrialCancer + <http://acl/BMV#IncreasedRiskEndometrialCancer6.4> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.0> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.53> + <http://acl/BMV#IncreasedRiskEndometrialCancer4.1> + <http://acl/BMV#IncreasedRiskEndometrialCancer7.5> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.3> + http://acl/BMV#DiseaseTypes + <http://acl/BMV#ProtoEndoAbnormality> + <http://acl/BMV#ProtoVenousThrombosis> + <http://acl/BMV#ProtoERPosLNNegStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage2BrCa> + <http://acl/BMV#ProtoFatalMI> + <http://acl/BMV#ProtoEndoCa> + <http://acl/BMV#ProtoNonFatalMI> + <http://acl/BMV#ProtoERNegLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNPosStage1BrCa> + ... 10 more + http://acl/BMV#ChemoTamRegimeTypes + <http://acl/BMV#ProtoPFTChemoTam> + <http://acl/BMV#ProtoLateCMFTChemTam> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoPAFTChemoTam> + <http://acl/BMV#ProtoACT> + <http://acl/BMV#ProtoMFTChemoTam> + http://acl/BMV#ChangeBMD + <http://acl/BMV#IncreasedLumbarBMD1.006> + <http://acl/BMV#DecreasedLumbarBMD0.986> + <http://acl/BMV#NoChangeRadialBMD1.0> + <http://acl/BMV#DecreasedRadialBMD_NOS> + <http://acl/BMV#DecreasedLumbarBMD0.993> + <http://acl/BMV#IncreasedLumbarBMD1.008> + <http://acl/BMV#IncreasedLumbarBMD1.012> + http://acl/BMV#ChangesInRisk + <http://acl/BMV#IncreasedRiskGastricCa3.0> + <http://acl/BMV#DecreasedRiskHotFlushes0.8> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.4> + <http://acl/BMV#IncreasedRiskGastricCa3.2> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.0> + <http://acl/BMV#DecreasedRiskCardiacDisease0.68> + <http://acl/BMV#DecreasedRiskFatalMI0.37> + <http://acl/BMV#IncreasedRiskSideEffects23> + <http://acl/BMV#IncreasedRiskCataracts1.14> + <http://acl/BMV#NoChangeRiskEndometrialAbnormality1> + ... 12 more + http://acl/BMV#BreastAdenoCa + <http://acl/BMV#ProtoERPosLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNNegStage1BrCa> + <http://acl/BMV#ProtoERNegLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNPosStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage2BrCa> + http://acl/BMV#DeltaRisk + <http://acl/BMV#IncreasedRiskGastricCa3.0> + <http://acl/BMV#DecreasedBrCaDFS0.8> + <http://acl/BMV#DecreasedRiskHotFlushes0.8> + <http://acl/BMV#IncreasedRiskGastricCa3.2> + <http://acl/BMV#DecreasedBrCaDFS0.5> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#DecreasedRiskFatalMI0.37> + <http://acl/BMV#NoChangeRiskEndometrialAbnormality1> + <http://acl/BMV#IncreasedRiskCataracts1.14> + <http://acl/BMV#DecreasedRiskBrCa0.55> + ... 27 more + http://acl/BMV#References + <http://acl/BMV#PlasmaCholesterolInst> + <http://acl/BMV#ProtoERPos> + <http://acl/BMV#ProtoLNNeg> + <http://acl/BMV#RadialBMDLevel> + <http://acl/BMV#ProtoLNPos> + <http://acl/BMV#ProtoPRNeg> + <http://acl/BMV#ProtoStage4> + <http://acl/BMV#ProtoPRPos> + <http://acl/BMV#ProtoPostmenopausal> + <http://acl/BMV#PlasmaFibrinogen> + ... 9 more + http://acl/BMV#IncreasedRiskEndometrialAbnormality + <http://acl/BMV#IncreasedRiskEndometrialCancer6.4> + <http://acl/BMV#IncreasedRiskEndometrialCancer6.0> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.53> + <http://acl/BMV#IncreasedRiskEndometrialCancer4.1> + <http://acl/BMV#IncreasedRiskEndometrialCancer7.5> + <http://acl/BMV#IncreasedRiskEndometrialCancer2.3> + http://acl/BMV#BreastCancer + <http://acl/BMV#ProtoERPosLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage1BrCa> + <http://acl/BMV#ProtoERPosLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNNegStage1BrCa> + <http://acl/BMV#ProtoERNegLNNegStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage1BrCa> + <http://acl/BMV#ProtoERPosLNPosStage2BrCa> + <http://acl/BMV#ProtoERNegLNPosStage2BrCa> + http://acl/BMV#ChangesInSurvival + <http://acl/BMV#DecreasedBrCaDFS0.8> + <http://acl/BMV#IncreasedBrCaDFS1.1> + <http://acl/BMV#IncreasedBrCaDFS1.2> + <http://acl/BMV#DecreasedBrCaDFS0.5> + <http://acl/BMV#IncreasedBrCaDFS1.3> + <http://acl/BMV#IncreasedBrCaDFSREF> + <http://acl/BMV#IncreasedBrCaDFS1.05> + <http://acl/BMV#IncreasedCardiacDSS1.52> + <http://acl/BMV#IncreasedBrCaDFS1.x> + <http://acl/BMV#IncreasedBrCaDFS1.5> + ... 6 more + http://acl/BMV#ChangeOverallSurvival + <http://acl/BMV#IncreasedOS1.03> + <http://acl/BMV#IncreasedOS1.2> + <http://acl/BMV#IncreasedOS1.1> + <http://acl/BMV#ProtoNoChangeOS> + <http://acl/BMV#IncreasedOS1.02> + http://acl/BMV#MedicalThings + <http://acl/BMV#ProtoEndoAbnormality> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoLNNeg> + <http://acl/BMV#IncreasedLumbarBMD1.012> + <http://acl/BMV#DecreasedRiskBrCa0.55> + <http://acl/BMV#PlasmaLDL> + <http://acl/BMV#DecreasedRiskBrCa0.6> + <http://acl/BMV#IncreasedOS1.2> + <http://acl/BMV#IncreasedOS1.1> + <http://acl/BMV#IncreasedRiskPersistentSideEffects2.3> + ... 102 more + http://acl/BMV#AdjuvantTreatment + <http://acl/BMV#TamFgt5Yr> + <http://acl/BMV#ProtoPFTChemoTam> + <http://acl/BMV#ProtoEarlyCMFTChemoTam> + <http://acl/BMV#ProtoPAFTChemoTam> + <http://acl/BMV#TamC40mg> + <http://acl/BMV#ProtoMFTChemoTam> + <http://acl/BMV#ProtoLateCMFTChemTam> + <http://acl/BMV#Tam30mg> + <http://acl/BMV#TamD2Yr> + <http://acl/BMV#TamE5Yr> + ... 4 more +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.co-ode.org/ontologies/amino-acid/2005/10/11/amino-acid.owl +#logical axioms: 469 +#classes: 55 +#object properties: 14 +#data properties: 1 +#individuals: 1 +classification time in ms: 203 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://transontology.org/bhakti_gaudiya/bhakti.owl +#logical axioms: 52 +#classes: 47 +#object properties: 2 +#data properties: 9 +#individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://protege.cim3.net/file/pub/ontologies/camera/camera.owl +#logical axioms: 48 +#classes: 13 +#object properties: 7 +#data properties: 8 +#individuals: 2 +classification time in ms: 15 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.bltk.ru/OWL/camera2.owl +#logical axioms: 351 +#classes: 38 +#object properties: 12 +#data properties: 53 +#individuals: 57 +Ontology is inconsistent. +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.owl-ontologies.com/Cardiology.owl +ERROR: Could not load ontology.http://transontology.org/consciousness/consciousness1.owl +#logical axioms: 119 +#classes: 30 +#object properties: 12 +#data properties: 0 +#individuals: 14 +classification time in ms: 47 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 1 + http://www.owl-ontologies.com/unnamed.owl#PersonalityOfGodhead + <http://www.owl-ontologies.com/unnamed.owl#Krsna> + <http://www.owl-ontologies.com/unnamed.owl#LordAniruddha> + <http://www.owl-ontologies.com/unnamed.owl#Narayana> + <http://www.owl-ontologies.com/unnamed.owl#Balarama> + <http://www.owl-ontologies.com/unnamed.owl#KaranadakasayiVisnuOfOurBrahmanda> + <http://www.owl-ontologies.com/unnamed.owl#LordBaladeva> + <http://www.owl-ontologies.com/unnamed.owl#LordSankarsana> + <http://www.owl-ontologies.com/unnamed.owl#KsirodakasayiVisnuOfOurBrahmanda> + <http://www.owl-ontologies.com/unnamed.owl#GarbhodakasayiVisnuOfOurBrahmanda> + <http://www.owl-ontologies.com/unnamed.owl#LordPradyumna> + ... 1 more +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://on.cs.unibas.ch/owl/1.0/Context.owl +#logical axioms: 54 +#classes: 9 +#object properties: 16 +#data properties: 7 +#individuals: 4 +classification time in ms: 47 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.nada.kth.se/%7Emehrana/Delegation.owl +#logical axioms: 63 +#classes: 19 +#object properties: 20 +#data properties: 4 +#individuals: 0 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.ecs.soton.ac.uk/%7Eaoj04r/resist.owl +#logical axioms: 239 +#classes: 349 +#object properties: 134 +#data properties: 38 +#individuals: 75 +classification time in ms: 2453 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 15 + http://www.aktors.org/ontology/support#Intangible-Thing + <http://www.aktors.org/ontology/support#twentynine-day-duration> + <http://www.aktors.org/ontology/support#twentyeight-day-duration> + <http://www.aktors.org/ontology/portal#Permanent-Contract> + <http://www.aktors.org/ontology/portal#Learning-Research-Area> + <http://www.aktors.org/ontology/portal#Lady> + <http://www.aktors.org/ontology/support#twelve-month-duration> + <http://www.aktors.org/ontology/support#time-measure-day> + <http://www.aktors.org/ontology/portal#Miss> + <http://www.aktors.org/ontology/portal#Language-Engineering> + <http://www.aktors.org/ontology/portal#Adaptive-Hypermedia> + ... 65 more + http://www.aktors.org/ontology/support#Unit-Of-Measure + <http://www.aktors.org/ontology/support#time-measure-day> + <http://www.aktors.org/ontology/support#time-measure-hour> + <http://www.aktors.org/ontology/support#time-measure-second> + <http://www.aktors.org/ontology/support#time-measure-month> + <http://www.aktors.org/ontology/support#time-measure-minute> + <http://www.aktors.org/ontology/support#time-measure-year> + http://www.aktors.org/ontology/portal#Academic-Degree + <http://www.aktors.org/ontology/portal#BSc> + <http://www.aktors.org/ontology/portal#PhD> + <http://www.aktors.org/ontology/portal#MA> + <http://www.aktors.org/ontology/portal#DEng> + <http://www.aktors.org/ontology/portal#BA> + <http://www.aktors.org/ontology/portal#MSc> + http://www.aktors.org/ontology/portal#Award + <http://www.aktors.org/ontology/portal#BSc> + <http://www.aktors.org/ontology/portal#PhD> + <http://www.aktors.org/ontology/portal#MA> + <http://www.aktors.org/ontology/portal#DEng> + <http://www.aktors.org/ontology/portal#BA> + <http://www.aktors.org/ontology/portal#MSc> + http://www.aktors.org/ontology/portal#Degree + <http://www.aktors.org/ontology/portal#BSc> + <http://www.aktors.org/ontology/portal#PhD> + <http://www.aktors.org/ontology/portal#MA> + <http://www.aktors.org/ontology/portal#DEng> + <http://www.aktors.org/ontology/portal#BA> + <http://www.aktors.org/ontology/portal#MSc> + http://www.aktors.org/ontology/support#Time-Measure + <http://www.aktors.org/ontology/support#time-measure-day> + <http://www.aktors.org/ontology/support#time-measure-hour> + <http://www.aktors.org/ontology/support#time-measure-second> + <http://www.aktors.org/ontology/support#time-measure-month> + <http://www.aktors.org/ontology/support#time-measure-minute> + <http://www.aktors.org/ontology/support#time-measure-year> + http://www.aktors.org/ontology/portal#Appellation + <http://www.aktors.org/ontology/portal#Mrs> + <http://www.aktors.org/ontology/portal#Miss> + <http://www.aktors.org/ontology/portal#Dr> + <http://www.aktors.org/ontology/portal#Sir> + <http://www.aktors.org/ontology/portal#Mr> + <http://www.aktors.org/ontology/portal#Ms> + <http://www.aktors.org/ontology/portal#Lady> + <http://www.aktors.org/ontology/portal#Prof> + http://www.aktors.org/ontology/portal#Organization-Size + <http://www.aktors.org/ontology/portal#very-large-size> + <http://www.aktors.org/ontology/portal#micro-size> + <http://www.aktors.org/ontology/portal#small-size> + <http://www.aktors.org/ontology/portal#large-size> + <http://www.aktors.org/ontology/portal#medium-size> + http://www.aktors.org/ontology/support#Thing + <http://www.aktors.org/ontology/support#twentynine-day-duration> + <http://www.aktors.org/ontology/support#twentyeight-day-duration> + <http://www.aktors.org/ontology/portal#Permanent-Contract> + <http://www.aktors.org/ontology/portal#Learning-Research-Area> + <http://www.aktors.org/ontology/portal#Lady> + <http://www.aktors.org/ontology/support#twelve-month-duration> + <http://www.aktors.org/ontology/support#time-measure-day> + <http://www.aktors.org/ontology/portal#Miss> + <http://www.aktors.org/ontology/portal#Language-Engineering> + <http://www.aktors.org/ontology/portal#Email-Medium> + ... 66 more + http://www.aktors.org/ontology/support#Quantity + <http://www.aktors.org/ontology/support#twentynine-day-duration> + <http://www.aktors.org/ontology/support#seven-day-duration> + <http://www.aktors.org/ontology/support#twentyeight-day-duration> + <http://www.aktors.org/ontology/support#twentyfour-hour-duration> + <http://www.aktors.org/ontology/support#thirty-day-duration> + <http://www.aktors.org/ontology/support#thirtyone-day-duration> + <http://www.aktors.org/ontology/support#twelve-month-duration> + http://www.aktors.org/ontology/portal#Research-Area + <http://www.aktors.org/ontology/portal#Knowledge-Retrieval> + <http://www.aktors.org/ontology/portal#Knowledge-Lifecycle> + <http://www.aktors.org/ontology/portal#Knowledge-Acquisition> + <http://www.aktors.org/ontology/portal#Software-Visualization> + <http://www.aktors.org/ontology/portal#Learning-Research-Area> + <http://www.aktors.org/ontology/portal#Hypermedia> + <http://www.aktors.org/ontology/portal#Semantic-Web-Area> + <http://www.aktors.org/ontology/portal#Knowledge-Modelling> + <http://www.aktors.org/ontology/portal#Language-Engineering> + <http://www.aktors.org/ontology/portal#Adaptive-Hypermedia> + ... 22 more + http://www.aktors.org/ontology/support#Physical-Quantity + <http://www.aktors.org/ontology/support#twentynine-day-duration> + <http://www.aktors.org/ontology/support#seven-day-duration> + <http://www.aktors.org/ontology/support#twentyeight-day-duration> + <http://www.aktors.org/ontology/support#twentyfour-hour-duration> + <http://www.aktors.org/ontology/support#thirty-day-duration> + <http://www.aktors.org/ontology/support#thirtyone-day-duration> + <http://www.aktors.org/ontology/support#twelve-month-duration> + http://www.aktors.org/ontology/portal#Software-Status + <http://www.aktors.org/ontology/portal#Experimental-Version> + <http://www.aktors.org/ontology/portal#Beta-Version> + <http://www.aktors.org/ontology/portal#Released-Version> + <http://www.aktors.org/ontology/portal#Alpha-Version> + <http://www.aktors.org/ontology/portal#Broken-Version> + http://www.aktors.org/ontology/support#Duration + <http://www.aktors.org/ontology/support#twentynine-day-duration> + <http://www.aktors.org/ontology/support#seven-day-duration> + <http://www.aktors.org/ontology/support#twentyeight-day-duration> + <http://www.aktors.org/ontology/support#twentyfour-hour-duration> + <http://www.aktors.org/ontology/support#thirty-day-duration> + <http://www.aktors.org/ontology/support#thirtyone-day-duration> + <http://www.aktors.org/ontology/support#twelve-month-duration> + http://www.aktors.org/ontology/portal#Generic-Area-Of-Interest + <http://www.aktors.org/ontology/portal#Knowledge-Retrieval> + <http://www.aktors.org/ontology/portal#Knowledge-Lifecycle> + <http://www.aktors.org/ontology/portal#Knowledge-Acquisition> + <http://www.aktors.org/ontology/portal#Software-Visualization> + <http://www.aktors.org/ontology/portal#Learning-Research-Area> + <http://www.aktors.org/ontology/portal#Hypermedia> + <http://www.aktors.org/ontology/portal#Semantic-Web-Area> + <http://www.aktors.org/ontology/portal#Knowledge-Modelling> + <http://www.aktors.org/ontology/portal#Language-Engineering> + <http://www.aktors.org/ontology/portal#Adaptive-Hypermedia> + ... 22 more +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://education.state.mn.us/datadictionary/owl/Education.owl +ERROR: Could not load ontology.http://www.csm.ornl.gov/%7E7lp/esg-owl/ESG1.1.owl +#logical axioms: 398 +#classes: 37 +#object properties: 28 +#data properties: 35 +#individuals: 44 +classification time in ms: 63 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 4 + http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#DateTimeEncoding + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY-MM-DDThh_mm_ssTZD> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY-MM-DD> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY-MM-DDThh_mmTZD> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY-MM-DDThh_mm_ss.sTZD> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#YYYY-MM> + http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#SimulationStatus + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#stopped> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#running> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#restarted> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#completed> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#pending> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#failed> + http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#Calendar + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#xunits> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#none> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#all_leap> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#zunits> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#_365_days> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#_366_days> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#gregorian> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#_360_days> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#name> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#yunits> + ... 6 more + http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#SpaceCoverage + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#southLimit> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#xunits> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#downLimit> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#name> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#eastLimit> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#yunits> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#zunits> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#westLimit> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#resolution> + <http://www.csm.ornl.gov/~7lp/onto-library/esg1.1#northLimit> + ... 2 more +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://protege.cim3.net/file/pub/ontologies/family.swrl.owl/family.swrl.owl +#logical axioms: 182 +#classes: 29 +#object properties: 21 +#data properties: 12 +#individuals: 42 +classification time in ms: 75438 +#unsatisfiable classes: 0 +#classes with min. 5 individuals: 14 + http://a.com/ontology#Nephew + <http://a.com/ontology#M10> + <http://a.com/ontology#M09> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#M03> + http://a.com/ontology#Woman + <http://a.com/ontology#F10> + <http://a.com/ontology#F08> + <http://a.com/ontology#F09> + <http://a.com/ontology#F04> + <http://a.com/ontology#F05> + <http://a.com/ontology#F06> + <http://a.com/ontology#F07> + <http://a.com/ontology#F01> + <http://a.com/ontology#F02> + <http://a.com/ontology#F03> + ... 1 more + http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Entity + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Minutes> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Hours> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Years> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Days> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Seconds> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Milliseconds> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Months> + http://a.com/ontology#Father + <http://a.com/ontology#M06> + <http://a.com/ontology#M07> + <http://a.com/ontology#M08> + <http://a.com/ontology#M01> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> + http://a.com/ontology#Child + <http://a.com/ontology#M10> + <http://a.com/ontology#M09> + <http://a.com/ontology#F09> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#F05> + <http://a.com/ontology#F06> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#F02> + ... 3 more + http://a.com/ontology#Mother + <http://a.com/ontology#F10> + <http://a.com/ontology#F08> + <http://a.com/ontology#F04> + <http://a.com/ontology#F06> + <http://a.com/ontology#F07> + <http://a.com/ontology#F01> + <http://a.com/ontology#F03> + http://a.com/ontology#Daugther + <http://a.com/ontology#F09> + <http://a.com/ontology#F05> + <http://a.com/ontology#F06> + <http://a.com/ontology#F02> + <http://a.com/ontology#F03> + http://a.com/ontology#Sibling + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#F05> + <http://a.com/ontology#F06> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#F03> + http://a.com/ontology#Person + <http://a.com/ontology#M10> + <http://a.com/ontology#F10> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#M07> + <http://a.com/ontology#M08> + <http://a.com/ontology#M01> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> + ... 11 more + http://a.com/ontology#Man + <http://a.com/ontology#M10> + <http://a.com/ontology#M09> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#M07> + <http://a.com/ontology#M08> + <http://a.com/ontology#M01> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> + ... 1 more + http://a.com/ontology#Relative + <http://a.com/ontology#M10> + <http://a.com/ontology#F10> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#M07> + <http://a.com/ontology#M08> + <http://a.com/ontology#M01> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> + ... 11 more + http://a.com/ontology#Parent + <http://a.com/ontology#F10> + <http://a.com/ontology#M06> + <http://a.com/ontology#M07> + <http://a.com/ontology#M08> + <http://a.com/ontology#M01> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> + <http://a.com/ontology#F08> + <http://a.com/ontology#F04> + ... 5 more + http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Granularity + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Minutes> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Hours> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Years> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Days> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Seconds> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Milliseconds> + <http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Months> + http://a.com/ontology#Son + <http://a.com/ontology#M10> + <http://a.com/ontology#M09> + <http://a.com/ontology#M05> + <http://a.com/ontology#M06> + <http://a.com/ontology#M02> + <http://a.com/ontology#M03> + <http://a.com/ontology#M04> +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ +http://www.fadyart.com/ontologies/data/Finance.owl +#logical axioms: 16014 +#classes: 323 +#object properties: 247 +#data properties: 74 +#individuals: 2466 +Ontology is inconsistent. +++++++++++++++++++++++++++++... 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