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[DL-Learner SVN] SF.net SVN: dl-learner:[2061] trunk/src/dl-learner/org/dllearner
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From: <ku...@us...> - 2010-02-18 09:16:18
|
Revision: 2061
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=2061&view=rev
Author: kurzum
Date: 2010-02-18 09:16:11 +0000 (Thu, 18 Feb 2010)
Log Message:
-----------
- correct displaying of manchester value
- added some brackets and VocabFilter
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/core/options/CommonConfigMappings.java
trunk/src/dl-learner/org/dllearner/core/owl/StringValueRestriction.java
trunk/src/dl-learner/org/dllearner/scripts/tiger/TestIterativeLearning.java
trunk/src/dl-learner/org/dllearner/utilities/experiments/TableRowColumn.java
Added Paths:
-----------
trunk/src/dl-learner/org/dllearner/scripts/tiger/IteratedConfig.java
trunk/src/dl-learner/org/dllearner/scripts/tiger/VocabFilter.java
Removed Paths:
-------------
trunk/src/dl-learner/org/dllearner/utilities/experiments/IteratedConfig.java
Modified: trunk/src/dl-learner/org/dllearner/core/options/CommonConfigMappings.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/core/options/CommonConfigMappings.java 2010-02-17 17:55:54 UTC (rev 2060)
+++ trunk/src/dl-learner/org/dllearner/core/options/CommonConfigMappings.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -39,22 +39,25 @@
public static SortedSet<Individual> getIndividualSet(Set<String> individuals) {
SortedSet<Individual> set = new TreeSet<Individual>();
- for(String individual : individuals)
+ for(String individual : individuals){
set.add(new Individual(individual));
+ }
return set;
}
public static SortedSet<NamedClass> getAtomicConceptSet(Set<String> atomicConcepts) {
SortedSet<NamedClass> set = new TreeSet<NamedClass>(cm);
- for(String atomicConcept : atomicConcepts)
+ for(String atomicConcept : atomicConcepts) {
set.add(new NamedClass(atomicConcept));
+ }
return set;
}
public static SortedSet<ObjectProperty> getAtomicRoleSet(Set<String> atomicRoles) {
SortedSet<ObjectProperty> set = new TreeSet<ObjectProperty>();
- for(String atomicRole : atomicRoles)
+ for(String atomicRole : atomicRoles){
set.add(new ObjectProperty(atomicRole));
+ }
return set;
}
}
Modified: trunk/src/dl-learner/org/dllearner/core/owl/StringValueRestriction.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/core/owl/StringValueRestriction.java 2010-02-17 17:55:54 UTC (rev 2060)
+++ trunk/src/dl-learner/org/dllearner/core/owl/StringValueRestriction.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -39,6 +39,11 @@
}
private static final long serialVersionUID = 5651982376457935975L;
+
+ @Override
+ public String toManchesterSyntaxString(String baseURI, Map<String,String> prefixes) {
+ return restrictedPropertyExpression.toString(baseURI, prefixes) + " value " +"\"" +value.toManchesterSyntaxString(baseURI, prefixes)+"\"";
+ }
@Override
public int getLength() {
@@ -49,6 +54,7 @@
return stringValue;
}
+ @Override
public String toKBSyntaxString(String baseURI, Map<String, String> prefixes) {
return "(" + restrictedPropertyExpression.toKBSyntaxString(baseURI, prefixes) + " STRINGVALUE " + value.toKBSyntaxString(baseURI, prefixes) + ")";
}
Copied: trunk/src/dl-learner/org/dllearner/scripts/tiger/IteratedConfig.java (from rev 2052, trunk/src/dl-learner/org/dllearner/utilities/experiments/IteratedConfig.java)
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/tiger/IteratedConfig.java (rev 0)
+++ trunk/src/dl-learner/org/dllearner/scripts/tiger/IteratedConfig.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -0,0 +1,111 @@
+package org.dllearner.scripts.tiger;
+
+import org.apache.log4j.Logger;
+import org.dllearner.utilities.experiments.ExperimentConfiguration;
+
+public class IteratedConfig extends ExperimentConfiguration{
+
+
+ private static final Logger logger = Logger.getLogger(IteratedConfig.class);
+
+ public int resultLimit = -1;
+
+ public int splits = 5;
+ public int initialsplits = 5;
+ public int negativeSplitAdd = 0;
+
+ public boolean useStartClass = true;
+ public boolean searchTree = false;
+ public int noise = 5;
+ public int noiseIterationFactor = 1;
+ //sets ValueFrequency treshold and maxExecution time
+ public boolean adaptMaxRuntime = true;
+ public int maxExecutionTime = 20;
+ public double factor = 2.0d ;//1.5d;
+
+ public boolean useDataHasValue = true;
+
+ public boolean ignorePOSFeatures = false;
+ public boolean ignoreSyntaxFeatures = false;
+
+// private String highestPrecision = "";
+// private String highestRecall = "";
+// private String highestFMeasure = "";
+
+ public IteratedConfig(String label, int iterations) {
+ super(label, iterations);
+ }
+
+ //reached iterations
+ //reached 100%
+
+ public boolean stopCondition(int iteration, double precision, double recall, double fmeasure, String concept){
+ if(iteration == 0){
+ //skip first;
+ return true;
+ }
+ logger.info("Testing stop condition (iter: "+iteration+" ) " );
+
+// if(higher(iterationPrecision, precision)){highestPrecision=concept;}
+// if(higher(iterationRecall, recall)){highestRecall=concept;}
+// if(higher(iterationFmeasure, fmeasure)){highestFMeasure=concept;}
+
+ boolean condIter = (iteration<this.sizeOfResultVector);
+ boolean condPrec = fmeasure <=1.0d;
+ if(!condIter){
+ logger.info("iterations reached, stopping");
+ return false;
+ }else if(!condPrec){
+ logger.info("fmeasure reached, stopping");
+ return false;
+ }else{
+ return true;
+ }
+ }
+
+
+
+
+
+// String pre = "\n*********\n"+label+"\n";
+// pre +="highestPrecision: "+highestPrecision+"\n";
+// pre +="highestRecall: "+highestRecall+"\n";
+// pre +="highestFMeasure: "+highestFMeasure+"\n";
+//
+//
+//
+// String precision = "Precision:\n";
+// String hits = "hits:\n";
+// String recall = "Recall:\n";
+// String fmeasure = "F-Measure:\n";
+// String learningtime = "learningtime:\n";
+// String totaltime = "Totaltime:\n";
+
+// for (int i = 0; i < iterationPrecision.length; i++) {
+// precision+=iterationPrecision[i].getAvg()+"\n";
+// hits+=iterationPrecision[i].getHits()+" | ";
+// recall+=iterationRecall[i].getAvg()+"\n";
+// fmeasure+=iterationFmeasure[i].getAvg()+"\n";
+// learningtime+=iterationLearningTime[i].getAvg()+"\n";
+// totaltime+=iterationTotalTime[i].getAvg()+"\n";
+// }
+
+// return pre+precision+recall+fmeasure+hits+"\n"+learningtime+totaltime;
+// }
+// public static double precision( int posAsPos, int retrieved){
+// double precision = ((double)posAsPos)/((double)retrieved);
+// logger.info("Precision: "+df.format(precision));
+// return precision;
+// }
+// public static double recall( int posAsPos, int allPositives){
+// double recall = ((double)posAsPos)/((double)allPositives);
+//
+// logger.info("Recall: "+df.format(recall));
+// return recall;
+//
+// }
+
+
+
+
+}
Modified: trunk/src/dl-learner/org/dllearner/scripts/tiger/TestIterativeLearning.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/tiger/TestIterativeLearning.java 2010-02-17 17:55:54 UTC (rev 2060)
+++ trunk/src/dl-learner/org/dllearner/scripts/tiger/TestIterativeLearning.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -17,6 +17,7 @@
import org.apache.log4j.Level;
import org.apache.log4j.Logger;
+import org.dllearner.algorithms.celoe.CELOE;
import org.dllearner.algorithms.refinement2.ROLComponent2;
import org.dllearner.algorithms.refinement2.ROLearner2;
import org.dllearner.core.ComponentManager;
@@ -31,7 +32,6 @@
import org.dllearner.kb.sparql.Cache;
import org.dllearner.kb.sparql.SPARQLTasks;
import org.dllearner.kb.sparql.SparqlEndpoint;
-import org.dllearner.kb.sparql.SparqlKnowledgeSource;
import org.dllearner.kb.sparql.SparqlQuery;
import org.dllearner.kb.sparql.SparqlQueryDescriptionConvertVisitor;
import org.dllearner.learningproblems.PosNegLPStandard;
@@ -44,7 +44,6 @@
import org.dllearner.utilities.experiments.ExMakerFixedSize;
import org.dllearner.utilities.experiments.ExMakerRandomizer;
import org.dllearner.utilities.experiments.Examples;
-import org.dllearner.utilities.experiments.IteratedConfig;
import org.dllearner.utilities.experiments.Jamon;
import org.dllearner.utilities.experiments.Table;
@@ -57,9 +56,14 @@
static DecimalFormat df = new DecimalFormat("00.###%");
public static DecimalFormat dftime = new DecimalFormat("#####.#");
+ public static boolean newTiger = true;
+
// static String backgroundXML = "files/tiger.noSchema.noImports.rdf";
- static String backgroundXML = "files/tiger_trimmed_toPOS.rdf";
- static String propertiesXML = "files/propertiesOnly.rdf";
+ static String backgroundXML = (newTiger)?"files/VirtuosoSyntaxSchema.rdf":"files/tiger_trimmed_toPOS.rdf";
+ static String sparqlEndpointURL ="http://db0.aksw.org:8893/sparql";
+ static String graph = (newTiger)?"http://nlp2rdf.org/tigerFull":"http://nlp2rdf.org/tiger";
+ static String rulegraph = (newTiger)?"http://nlp2rdf.org/schemaFull/rules1":"http://nlp2rdf.org/schema/rules1";
+// static String propertiesXML = "files/propertiesOnly.rdf";
static String sentenceXMLFolder = "files/tiger/";
static String resultFolder = "tigerResults/";
@@ -75,9 +79,7 @@
static SparqlEndpoint sparqlEndpoint;
static SPARQLTasks sparqlTasks;
- static String sparqlEndpointURL = "http://db0.aksw.org:8893/sparql";
- static String graph = "http://nlp2rdf.org/tiger";
- static String rulegraph = "http://nlp2rdf.org/schema/rules1";
+
static MonKeyImp logFMeasure = new MonKeyImp("F-Measure", Jamon.PERCENTAGE);
static MonKeyImp logPrecision = new MonKeyImp("Precision", Jamon.PERCENTAGE);
@@ -156,7 +158,7 @@
negatives = null;
allExamples = null;
- List<IteratedConfig> configs = getConfigs();
+ List<IteratedConfig> configs = getConfigsNo();
Table masterTable = new Table();
for (IteratedConfig experimentConfig : configs) {
experimentConfig.init(mks);
@@ -234,22 +236,26 @@
}
- public static List<IteratedConfig> getConfigs() {
+ public static List<IteratedConfig> getConfigsNo() {
List<IteratedConfig> l = new ArrayList<IteratedConfig>();
- IteratedConfig baseline = new IteratedConfig("baseline_5_5", iterations);
+ IteratedConfig baseline = new IteratedConfig("baseline", iterations);
+ baseline.initialsplits = 10;
+ baseline.noise = 0;
+ baseline.searchTree = true;
+ baseline.factor = 10.0d;
- IteratedConfig reducedExamples = new IteratedConfig("reducedExamples_2_2", iterations);
+ IteratedConfig reducedExamples = new IteratedConfig("reducedExamples", iterations);
reducedExamples.initialsplits = 2;
reducedExamples.splits = 2;
reducedExamples.factor = 6.0d;
- IteratedConfig fixRuntime = new IteratedConfig("fixRuntime_20s", iterations);
+ IteratedConfig fixRuntime = new IteratedConfig("fixRuntime", iterations);
fixRuntime.adaptMaxRuntime = false;
- fixRuntime.maxExecutionTime = 40;
+ fixRuntime.maxExecutionTime = 20;
- IteratedConfig useLemma = new IteratedConfig("useLemma_false", iterations);
+ IteratedConfig useLemma = new IteratedConfig("noLemma", iterations);
useLemma.useDataHasValue = false;
l.add(baseline);
@@ -264,7 +270,8 @@
List<IteratedConfig> l = new ArrayList<IteratedConfig>();
IteratedConfig baseline = new IteratedConfig("baseline", iterations);
baseline.noiseIterationFactor = 0;
-
+ baseline.noise = 0;
+ baseline.searchTree = true;
IteratedConfig increasedNegativeExamples = new IteratedConfig("increasedNegativeExamples", iterations);
increasedNegativeExamples.negativeSplitAdd = 10;
@@ -276,7 +283,7 @@
- IteratedConfig useLemma = new IteratedConfig("useLemma_false", iterations);
+ IteratedConfig useLemma = new IteratedConfig("noLemma", iterations);
useLemma.useDataHasValue = false;
l.add(baseline);
@@ -326,6 +333,10 @@
concepts.add(ed.getDescription().toKBSyntaxString(null,null));
logger.debug("USING CONCEPT: " + lastConcept);
+ if (true) {
+ System.exit(0);
+ }
+
/* RETRIEVING */
Monitor queryTime = JamonMonitorLogger.getTimeMonitor(TestIterativeLearning.class, "queryTime")
.start();
@@ -453,33 +464,33 @@
return tmp;
}
- @SuppressWarnings("unused")
- private static Set<KnowledgeSource> _getSPARQL(Examples ex) throws Exception {
- Set<KnowledgeSource> tmp = new HashSet<KnowledgeSource>();
+// @SuppressWarnings("unused")
+// private static Set<KnowledgeSource> _getSPARQL(Examples ex) throws Exception {
+// Set<KnowledgeSource> tmp = new HashSet<KnowledgeSource>();
+//
+// Set<String> examples = new TreeSet<String>();
+// examples.addAll(ex.getPosTrain());
+// examples.addAll(ex.getNegTrain());
+// SparqlKnowledgeSource ks = ComponentFactory.getSparqlKnowledgeSource(new URL(sparqlEndpointURL),
+// examples);
+// ks.getConfigurator().setUrl(new URL(sparqlEndpointURL));
+// ks.getConfigurator().setDefaultGraphURIs(new HashSet<String>(Arrays.asList(new String[] { graph })));
+// ks.getConfigurator().setInstances(examples);
+// ks.getConfigurator().setDissolveBlankNodes(false);
+// ks.getConfigurator().setRecursionDepth(2);
+// ks.getConfigurator().setDissolveBlankNodes(false);
+// ks.getConfigurator().setCloseAfterRecursion(true);
+// ks.getConfigurator().setGetAllSuperClasses(true);
+// ks.getConfigurator().setGetPropertyInformation(false);
+// ks.getConfigurator().setUseLits(true);
+// // ks.getConfigurator().
+// OWLFile ks2 = ComponentFactory.getOWLFile(new File(propertiesXML).toURI().toURL());
+// tmp.add(ks);
+// tmp.add(ks2);
+//
+// return tmp;
+// }
- Set<String> examples = new TreeSet<String>();
- examples.addAll(ex.getPosTrain());
- examples.addAll(ex.getNegTrain());
- SparqlKnowledgeSource ks = ComponentFactory.getSparqlKnowledgeSource(new URL(sparqlEndpointURL),
- examples);
- ks.getConfigurator().setUrl(new URL(sparqlEndpointURL));
- ks.getConfigurator().setDefaultGraphURIs(new HashSet<String>(Arrays.asList(new String[] { graph })));
- ks.getConfigurator().setInstances(examples);
- ks.getConfigurator().setDissolveBlankNodes(false);
- ks.getConfigurator().setRecursionDepth(2);
- ks.getConfigurator().setDissolveBlankNodes(false);
- ks.getConfigurator().setCloseAfterRecursion(true);
- ks.getConfigurator().setGetAllSuperClasses(true);
- ks.getConfigurator().setGetPropertyInformation(false);
- ks.getConfigurator().setUseLits(true);
- // ks.getConfigurator().
- OWLFile ks2 = ComponentFactory.getOWLFile(new File(propertiesXML).toURI().toURL());
- tmp.add(ks);
- tmp.add(ks2);
-
- return tmp;
- }
-
// test if virtuoso is correct
// public static void validate(Description d, Examples newlyFound){
// try {
@@ -613,6 +624,7 @@
}
ROLComponent2 la = ComponentFactory.getROLComponent2(lp, rc);
+// CELOE la = ComponentFactory.getCELOE(lp, rc);
la.getConfigurator().setUseExistsConstructor(true);
la.getConfigurator().setUseAllConstructor(false);
@@ -621,7 +633,43 @@
la.getConfigurator().setUseHasValueConstructor(false);
la.getConfigurator().setUseDataHasValueConstructor(config.useDataHasValue);
la.getConfigurator().setValueFrequencyThreshold(valueFrequencyThreshold);
+
+// if(config.ignorePOSFeatures){
+// la.getConfigurator().setIgnoredConcepts(VocabFilter.posClasses);
+// la.getConfigurator().setIgnoredRoles(VocabFilter.posProperties);
+// }
+ SortedSet<String> inv = new TreeSet<String>();
+ for(String s : VocabFilter.syntaxProperies){
+ if(s.toLowerCase().endsWith("inv")){
+ inv.add(s);
+ }
+ }
+ inv.add("http://nlp2rdf.org/ontology/hasToken");
+ inv.add("http://nlp2rdf.org/ontology/firstToken");
+// System.out.println(inv);
+// if (true) {
+// System.exit(0);
+// }
+ SortedSet<String> all = new TreeSet<String>(Helper.difference(VocabFilter.syntaxProperies, inv));
+ all.addAll(VocabFilter.posProperties);
+ la.getConfigurator().setAllowedRoles(all);
+// if(config.ignoreSyntaxFeatures){
+// la.getConfigurator().setIgnoredConcepts(VocabFilter.syntaxClasses);
+// la.getConfigurator().setIgnoredRoles(VocabFilter.syntaxProperies);
+// }else{
+// la.getConfigurator().setAllowedRoles(all);
+// }
+
+
+
+
+
+// la.getConfigurator().setInstanceBasedDisjoints(false);
+
+
+
+
la.getConfigurator().setIgnoredConcepts(
new HashSet<String>(Arrays.asList(new String[] {
"http://nlp2rdf.org/ontology/sentencefinalpunctuation_tag",
Added: trunk/src/dl-learner/org/dllearner/scripts/tiger/VocabFilter.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/tiger/VocabFilter.java (rev 0)
+++ trunk/src/dl-learner/org/dllearner/scripts/tiger/VocabFilter.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -0,0 +1,265 @@
+package org.dllearner.scripts.tiger;
+
+import java.util.Arrays;
+import java.util.SortedSet;
+import java.util.TreeSet;
+
+public class VocabFilter {
+ public static SortedSet<String> syntaxProperies = new TreeSet<String>(Arrays.asList(new String[]{
+ "http://nlp2rdf.org/ontology/AC",
+ "http://nlp2rdf.org/ontology/ACInv",
+ "http://nlp2rdf.org/ontology/ADC",
+ "http://nlp2rdf.org/ontology/ADCInv",
+ "http://nlp2rdf.org/ontology/AMS",
+ "http://nlp2rdf.org/ontology/AMSInv",
+ "http://nlp2rdf.org/ontology/APEdge",
+ "http://nlp2rdf.org/ontology/APEdgeInv",
+ "http://nlp2rdf.org/ontology/APP",
+ "http://nlp2rdf.org/ontology/APPInv",
+ "http://nlp2rdf.org/ontology/AVC",
+ "http://nlp2rdf.org/ontology/AVCInv",
+ "http://nlp2rdf.org/ontology/CD",
+ "http://nlp2rdf.org/ontology/CDInv",
+ "http://nlp2rdf.org/ontology/CM",
+ "http://nlp2rdf.org/ontology/CMInv",
+ "http://nlp2rdf.org/ontology/CVC",
+ "http://nlp2rdf.org/ontology/CVCInv",
+ "http://nlp2rdf.org/ontology/DA",
+ "http://nlp2rdf.org/ontology/DAInv",
+ "http://nlp2rdf.org/ontology/DH",
+ "http://nlp2rdf.org/ontology/DHInv",
+ "http://nlp2rdf.org/ontology/DM",
+ "http://nlp2rdf.org/ontology/DMInv",
+ "http://nlp2rdf.org/ontology/EP",
+ "http://nlp2rdf.org/ontology/EPInv",
+ "http://nlp2rdf.org/ontology/HD",
+ "http://nlp2rdf.org/ontology/HDInv",
+ "http://nlp2rdf.org/ontology/JU",
+ "http://nlp2rdf.org/ontology/JUInv",
+ "http://nlp2rdf.org/ontology/MNR",
+ "http://nlp2rdf.org/ontology/MNRInv",
+ "http://nlp2rdf.org/ontology/NG",
+ "http://nlp2rdf.org/ontology/NGInv",
+ "http://nlp2rdf.org/ontology/NK",
+ "http://nlp2rdf.org/ontology/NKInv",
+ "http://nlp2rdf.org/ontology/NPEdge",
+ "http://nlp2rdf.org/ontology/NPEdgeInv",
+ "http://nlp2rdf.org/ontology/OC",
+ "http://nlp2rdf.org/ontology/OCInv",
+ "http://nlp2rdf.org/ontology/OG",
+ "http://nlp2rdf.org/ontology/OGInv",
+ "http://nlp2rdf.org/ontology/OP",
+ "http://nlp2rdf.org/ontology/OPInv",
+ "http://nlp2rdf.org/ontology/PAR",
+ "http://nlp2rdf.org/ontology/PARInv",
+ "http://nlp2rdf.org/ontology/PD",
+ "http://nlp2rdf.org/ontology/PDInv",
+ "http://nlp2rdf.org/ontology/PG",
+ "http://nlp2rdf.org/ontology/PGInv",
+ "http://nlp2rdf.org/ontology/PM",
+ "http://nlp2rdf.org/ontology/PMInv",
+ "http://nlp2rdf.org/ontology/PPEdge",
+ "http://nlp2rdf.org/ontology/PPEdgeInv",
+ "http://nlp2rdf.org/ontology/RE",
+ "http://nlp2rdf.org/ontology/REInv",
+ "http://nlp2rdf.org/ontology/RS",
+ "http://nlp2rdf.org/ontology/RSInv",
+ "http://nlp2rdf.org/ontology/SBP",
+ "http://nlp2rdf.org/ontology/SBPInv",
+ "http://nlp2rdf.org/ontology/SP",
+ "http://nlp2rdf.org/ontology/SPInv",
+ "http://nlp2rdf.org/ontology/SyntacticEdge",
+ "http://nlp2rdf.org/ontology/SyntacticEdgeInv",
+ "http://nlp2rdf.org/ontology/VO",
+ "http://nlp2rdf.org/ontology/VOInv",
+ "http://nlp2rdf.org/ontology/VPEdge",
+ "http://nlp2rdf.org/ontology/VPEdgeInv",
+ "http://nlp2rdf.org/ontology/accusativeObject",
+ "http://nlp2rdf.org/ontology/accusativeObjectInv",
+ "http://nlp2rdf.org/ontology/apposition",
+ "http://nlp2rdf.org/ontology/appositionInv",
+ "http://nlp2rdf.org/ontology/comparativeComplement",
+ "http://nlp2rdf.org/ontology/comparativeComplementInv",
+ "http://nlp2rdf.org/ontology/complementizer",
+ "http://nlp2rdf.org/ontology/complementizerInv",
+ "http://nlp2rdf.org/ontology/conjunct",
+ "http://nlp2rdf.org/ontology/conjunctInv",
+ "http://nlp2rdf.org/ontology/modifier",
+ "http://nlp2rdf.org/ontology/modifierInv",
+ "http://nlp2rdf.org/ontology/numberComponent",
+ "http://nlp2rdf.org/ontology/numberComponentInv",
+ "http://nlp2rdf.org/ontology/placeholder",
+ "http://nlp2rdf.org/ontology/placeholderInv",
+ "http://nlp2rdf.org/ontology/properNounComponent",
+ "http://nlp2rdf.org/ontology/properNounComponentInv",
+ "http://nlp2rdf.org/ontology/relativeClause",
+ "http://nlp2rdf.org/ontology/relativeClauseInv",
+ "http://nlp2rdf.org/ontology/secondAccusativeObject",
+ "http://nlp2rdf.org/ontology/secondAccusativeObjectInv",
+ "http://nlp2rdf.org/ontology/separableVerbPrefix",
+ "http://nlp2rdf.org/ontology/separableVerbPrefixInv",
+ "http://nlp2rdf.org/ontology/subject",
+ "http://nlp2rdf.org/ontology/subjectInv",
+ "http://nlp2rdf.org/ontology/syntacticEdge",
+ "http://nlp2rdf.org/ontology/syntacticEdgeInv",
+ "http://nlp2rdf.org/ontology/unitComponent",
+ "http://nlp2rdf.org/ontology/unitComponentInv"}));
+
+
+ public static SortedSet<String> syntaxClasses = new TreeSet<String>(Arrays.asList(new String[]{
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#AdjectivePhrase",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#Coordination",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#NounPhrase",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#PrepositionalPhrase",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#SyntacticNode",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/tiger-syntax.owl#VerbalPhrase",
+ "http://nlp2rdf.org/ontology/adjectivePhrase",
+ "http://nlp2rdf.org/ontology/chunk",
+ "http://nlp2rdf.org/ontology/complexNumeral",
+ "http://nlp2rdf.org/ontology/coordinatedAdjectivePhrase",
+ "http://nlp2rdf.org/ontology/coordinatedComplementizer",
+ "http://nlp2rdf.org/ontology/coordinatedNounPhrase",
+ "http://nlp2rdf.org/ontology/coordinatedVerbPhrase",
+ "http://nlp2rdf.org/ontology/discourseLevelConstituent",
+ "http://nlp2rdf.org/ontology/nounPhrase",
+ "http://nlp2rdf.org/ontology/prepositionalPhrase",
+ "http://nlp2rdf.org/ontology/properNoun",
+ "http://nlp2rdf.org/ontology/verbPhrase"}));
+
+
+ public static SortedSet<String> posProperties = new TreeSet<String>(Arrays.asList(new String[]{}));
+
+
+ public static SortedSet<String> posClasses = new TreeSet<String>(Arrays.asList(new String[]{
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Additional",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Adjective",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Adposition",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Adverb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AdverbialInterrogativeRelativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AnsweringParticle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Article",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributiveAdjective",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributiveDemonstrativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributiveIndefinitePronounWithoutDeterminer",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributiveInterrogativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributivePossessivePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AttributiveRelativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AuxiliaryImperative",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AuxiliaryInfinitive",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AuxiliaryPastParticiple",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#AuxilliaryVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#CardinalNumber",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#CircumpositionRightPart",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Comma",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#CommonNoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ComparisonParticle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Conjunction",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#CoordinatingConjunction",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#DemonstrativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#FiniteAuxiliaryVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#FiniteModalVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#FiniteVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ForeignMaterial",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Imperative",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#IndefinitePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Infinitive",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#InfinitiveWithZu",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Interjection",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#InterrogativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#LexicalVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ModalInfinitive",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ModalPastParticiple",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ModalVerb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#NegationParticle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#NonWords",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Noun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#POS",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Particle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ParticleWithAdjective",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PastParticiple",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PersonalPronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PossessivePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Postposition",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PredicativeAdjective",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Preposition",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PrepositionWithArticle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#PronominalAdverb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Pronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ProperNoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Punctuation",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ReflexivePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#RelativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SentenceFinalPunctuation",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SentenceInternalPunctuation",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SeparatedVerbalParticle",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubordinatingConjunction",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubordinatingConjunctionWithSentence",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubordinatingConjunctionWithZu",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubstitutiveDemonstrativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubstitutiveIndefinitePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubstitutiveInterrogativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubstitutivePossessivePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#SubstitutiveRelativePronoun",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Tag",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Truncated",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#Verb",
+ "http://nachhalt.sfb632.uni-potsdam.de/owl/stts.owl#ZuWithInfinitive",
+ "http://nlp2rdf.org/ontology/ADJA",
+ "http://nlp2rdf.org/ontology/ADJD",
+ "http://nlp2rdf.org/ontology/ADV",
+ "http://nlp2rdf.org/ontology/APPO",
+ "http://nlp2rdf.org/ontology/APPR",
+ "http://nlp2rdf.org/ontology/APPRART",
+ "http://nlp2rdf.org/ontology/APZR",
+ "http://nlp2rdf.org/ontology/ART",
+ "http://nlp2rdf.org/ontology/CARD",
+ "http://nlp2rdf.org/ontology/FM",
+ "http://nlp2rdf.org/ontology/ITJ",
+ "http://nlp2rdf.org/ontology/KOKOM",
+ "http://nlp2rdf.org/ontology/KON",
+ "http://nlp2rdf.org/ontology/KOUI",
+ "http://nlp2rdf.org/ontology/KOUS",
+ "http://nlp2rdf.org/ontology/NE",
+ "http://nlp2rdf.org/ontology/NN",
+ "http://nlp2rdf.org/ontology/NNE",
+ "http://nlp2rdf.org/ontology/PDAT",
+ "http://nlp2rdf.org/ontology/PDS",
+ "http://nlp2rdf.org/ontology/PIAT",
+ "http://nlp2rdf.org/ontology/PIS",
+ "http://nlp2rdf.org/ontology/PPER",
+ "http://nlp2rdf.org/ontology/PPOSAT",
+ "http://nlp2rdf.org/ontology/PPOSS",
+ "http://nlp2rdf.org/ontology/PRELAT",
+ "http://nlp2rdf.org/ontology/PRELS",
+ "http://nlp2rdf.org/ontology/PRF",
+ "http://nlp2rdf.org/ontology/PROAV",
+ "http://nlp2rdf.org/ontology/PTKA",
+ "http://nlp2rdf.org/ontology/PTKANT",
+ "http://nlp2rdf.org/ontology/PTKNEG",
+ "http://nlp2rdf.org/ontology/PTKVZ",
+ "http://nlp2rdf.org/ontology/PTKZU",
+ "http://nlp2rdf.org/ontology/PWAT",
+ "http://nlp2rdf.org/ontology/PWAV",
+ "http://nlp2rdf.org/ontology/PWS",
+ "http://nlp2rdf.org/ontology/TRUNC",
+ "http://nlp2rdf.org/ontology/VAFIN",
+ "http://nlp2rdf.org/ontology/VAIMP",
+ "http://nlp2rdf.org/ontology/VAINF",
+ "http://nlp2rdf.org/ontology/VAPP",
+ "http://nlp2rdf.org/ontology/VMFIN",
+ "http://nlp2rdf.org/ontology/VMINF",
+ "http://nlp2rdf.org/ontology/VMPP",
+ "http://nlp2rdf.org/ontology/VVFIN",
+ "http://nlp2rdf.org/ontology/VVIMP",
+ "http://nlp2rdf.org/ontology/VVINF",
+ "http://nlp2rdf.org/ontology/VVIZU",
+ "http://nlp2rdf.org/ontology/VVPP",
+ "http://nlp2rdf.org/ontology/XY",
+ "http://nlp2rdf.org/ontology/comma_tag",
+ "http://nlp2rdf.org/ontology/generalsentenceinternalpunctuation_tag",
+ "http://nlp2rdf.org/ontology/sentencefinalpunctuation_tag"}));
+
+
+
+
+}
Deleted: trunk/src/dl-learner/org/dllearner/utilities/experiments/IteratedConfig.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/utilities/experiments/IteratedConfig.java 2010-02-17 17:55:54 UTC (rev 2060)
+++ trunk/src/dl-learner/org/dllearner/utilities/experiments/IteratedConfig.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -1,107 +0,0 @@
-package org.dllearner.utilities.experiments;
-
-import org.apache.log4j.Logger;
-
-public class IteratedConfig extends ExperimentConfiguration{
-
-
- private static final Logger logger = Logger.getLogger(IteratedConfig.class);
-
- public int resultLimit = -1;
-
- public int splits = 5;
- public int initialsplits = 5;
- public int negativeSplitAdd = 0;
-
- public boolean useStartClass = true;
- public boolean searchTree = false;
- public int noise = 5;
- public int noiseIterationFactor = 1;
- //sets ValueFrequency treshold and maxExecution time
- public boolean adaptMaxRuntime = true;
- public int maxExecutionTime = 20;
- public double factor = 2.0d ;//1.5d;
-
- public boolean useDataHasValue = true;
-
-// private String highestPrecision = "";
-// private String highestRecall = "";
-// private String highestFMeasure = "";
-
- public IteratedConfig(String label, int iterations) {
- super(label, iterations);
- }
-
- //reached iterations
- //reached 100%
-
- public boolean stopCondition(int iteration, double precision, double recall, double fmeasure, String concept){
- if(iteration == 0){
- //skip first;
- return true;
- }
- logger.info("Testing stop condition (iter: "+iteration+" ) " );
-
-// if(higher(iterationPrecision, precision)){highestPrecision=concept;}
-// if(higher(iterationRecall, recall)){highestRecall=concept;}
-// if(higher(iterationFmeasure, fmeasure)){highestFMeasure=concept;}
-
- boolean condIter = (iteration<this.sizeOfResultVector);
- boolean condPrec = fmeasure <=1.0d;
- if(!condIter){
- logger.info("iterations reached, stopping");
- return false;
- }else if(!condPrec){
- logger.info("fmeasure reached, stopping");
- return false;
- }else{
- return true;
- }
- }
-
-
-
-
-
-// String pre = "\n*********\n"+label+"\n";
-// pre +="highestPrecision: "+highestPrecision+"\n";
-// pre +="highestRecall: "+highestRecall+"\n";
-// pre +="highestFMeasure: "+highestFMeasure+"\n";
-//
-//
-//
-// String precision = "Precision:\n";
-// String hits = "hits:\n";
-// String recall = "Recall:\n";
-// String fmeasure = "F-Measure:\n";
-// String learningtime = "learningtime:\n";
-// String totaltime = "Totaltime:\n";
-
-// for (int i = 0; i < iterationPrecision.length; i++) {
-// precision+=iterationPrecision[i].getAvg()+"\n";
-// hits+=iterationPrecision[i].getHits()+" | ";
-// recall+=iterationRecall[i].getAvg()+"\n";
-// fmeasure+=iterationFmeasure[i].getAvg()+"\n";
-// learningtime+=iterationLearningTime[i].getAvg()+"\n";
-// totaltime+=iterationTotalTime[i].getAvg()+"\n";
-// }
-
-// return pre+precision+recall+fmeasure+hits+"\n"+learningtime+totaltime;
-// }
-// public static double precision( int posAsPos, int retrieved){
-// double precision = ((double)posAsPos)/((double)retrieved);
-// logger.info("Precision: "+df.format(precision));
-// return precision;
-// }
-// public static double recall( int posAsPos, int allPositives){
-// double recall = ((double)posAsPos)/((double)allPositives);
-//
-// logger.info("Recall: "+df.format(recall));
-// return recall;
-//
-// }
-
-
-
-
-}
Modified: trunk/src/dl-learner/org/dllearner/utilities/experiments/TableRowColumn.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/utilities/experiments/TableRowColumn.java 2010-02-17 17:55:54 UTC (rev 2060)
+++ trunk/src/dl-learner/org/dllearner/utilities/experiments/TableRowColumn.java 2010-02-18 09:16:11 UTC (rev 2061)
@@ -123,6 +123,7 @@
}
private double getValue(int i){
+// return monitors[i].getAvg();
switch(display){
case AVG: return monitors[i].getAvg();
case HITS: return monitors[i].getHits();
@@ -133,7 +134,7 @@
private String latexFormat(FinalizedMonitor monitors, double value){
if(monitors.getUnits().equals(JamonMonitorLogger.PERCENTAGE)){
- return dfPercentage.format(value);
+ return dfPercentage.format(value).replace("%", "\\%").replace("_", "\\_");
}else{
return dfLatexDefault.format(value);
}
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