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[DL-Learner SVN] SF.net SVN: dl-learner:[1214] trunk
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From: <jen...@us...> - 2008-09-15 17:28:36
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Revision: 1214
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1214&view=rev
Author: jenslehmann
Date: 2008-09-15 17:28:02 +0000 (Mon, 15 Sep 2008)
Log Message:
-----------
- fixed and improved search tree display
- fixed some conf files according to unit test
Modified Paths:
--------------
trunk/examples/arch/arch_owl.conf
trunk/examples/conflict/arch_refexamples_owlAPI.conf
trunk/examples/conflict/test_ZERO_ONE_refexamples_owlAPI.conf
trunk/examples/cross-benchmark/arch/arch_gp.conf
trunk/examples/cross-benchmark/arch/arch_hybrid.conf
trunk/examples/cross-benchmark/arch/arch_refexamples.conf
trunk/examples/cross-benchmark/forte/uncle_gp.conf
trunk/examples/cross-benchmark/forte/uncle_hybrid.conf
trunk/examples/cross-benchmark/forte/uncle_refexamples.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_gp.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_hybrid.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_refexamples.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_gp.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_hybrid.conf
trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_refexamples.conf
trunk/examples/cross-benchmark/poker/pair_gp.conf
trunk/examples/cross-benchmark/poker/pair_hybrid.conf
trunk/examples/cross-benchmark/poker/pair_refexamples.conf
trunk/examples/cross-benchmark/poker/straight_gp.conf
trunk/examples/cross-benchmark/poker/straight_hybrid.conf
trunk/examples/cross-benchmark/poker/straight_refexamples.conf
trunk/examples/cross-benchmark/trains/trains_gp.conf
trunk/examples/cross-benchmark/trains/trains_hybrid.conf
trunk/examples/cross-benchmark/trains/trains_refexamples.conf
trunk/examples/family/father_posonly.conf
trunk/examples/krk/complete_no_draw.conf
trunk/examples/semantic_bible/normal.conf
trunk/examples/semantic_bible/normal_retrieval_special.conf
trunk/examples/semantic_bible/sparqlbible.conf
trunk/examples/semantic_bible/woman.conf
trunk/examples/sparql/govtrack.conf
trunk/examples/sparql/musicbrainz.conf
trunk/examples/sparql/roles_notworking/Roles_fixed_DBPedia_monarch_range_yago.conf
trunk/src/dl-learner/org/dllearner/algorithms/refexamples/ExampleBasedNode.java
trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java
trunk/src/dl-learner/org/dllearner/gui/RunPanel.java
trunk/src/dl-learner/org/dllearner/gui/StartGUI.java
trunk/src/dl-learner/org/dllearner/gui/TreeWindow.java
trunk/src/dl-learner/org/dllearner/test/junit/ExampleTests.java
Added Paths:
-----------
trunk/src/dl-learner/org/dllearner/gui/SearchTree.java
Modified: trunk/examples/arch/arch_owl.conf
===================================================================
--- trunk/examples/arch/arch_owl.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/arch/arch_owl.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -16,8 +16,9 @@
* Copyright (C) 2007, Sebastian Hellmann
*/
+refexamples.writeSearchTree = true;
+refexamples.searchTreeFile = "log/test.txt";
-
/** background knowledge **/
import("arch.owl");
Modified: trunk/examples/conflict/arch_refexamples_owlAPI.conf
===================================================================
--- trunk/examples/conflict/arch_refexamples_owlAPI.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/conflict/arch_refexamples_owlAPI.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -17,7 +17,7 @@
*/
algorithm = refexamples;
-reasoner=owlAPI;
+reasoner=owlAPIReasoner;
Modified: trunk/examples/conflict/test_ZERO_ONE_refexamples_owlAPI.conf
===================================================================
--- trunk/examples/conflict/test_ZERO_ONE_refexamples_owlAPI.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/conflict/test_ZERO_ONE_refexamples_owlAPI.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -11,7 +11,7 @@
algorithm = refexamples;
-reasoner=owlAPI;
+reasoner=owlAPIReasoner;
refexamples.useAllConstructor = false;
Modified: trunk/examples/cross-benchmark/arch/arch_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/arch/arch_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/arch/arch_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -10,7 +10,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("arch.owl");
Modified: trunk/examples/cross-benchmark/arch/arch_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/arch/arch_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/arch/arch_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -10,7 +10,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("arch.owl");
Modified: trunk/examples/cross-benchmark/arch/arch_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/arch/arch_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/arch/arch_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -1,5 +1,5 @@
algorithm = refexamples;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("arch.owl");
+c1
Modified: trunk/examples/cross-benchmark/forte/uncle_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/forte/uncle_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/forte/uncle_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -27,7 +27,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("forte_family.owl");
/** examples **/
Modified: trunk/examples/cross-benchmark/forte/uncle_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/forte/uncle_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/forte/uncle_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -28,7 +28,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("forte_family.owl");
/** examples **/
Modified: trunk/examples/cross-benchmark/forte/uncle_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/forte/uncle_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/forte/uncle_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -18,7 +18,7 @@
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("forte_family.owl");
/** examples **/
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -20,7 +20,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances_complex.owl");
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -20,7 +20,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances_complex.owl");
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_complex_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -10,7 +10,7 @@
***********************/
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances_complex.owl");
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -21,7 +21,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances.owl");
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -20,7 +20,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances.owl");
Modified: trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/moral_reasoner/moral_43examples_simple_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -10,7 +10,7 @@
***********************/
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/** background knowledge **/
import("moral_43instances.owl");
Modified: trunk/examples/cross-benchmark/poker/pair_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/pair_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/pair_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -17,7 +17,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/*Background knowledge*/
import("pair50.owl");
Modified: trunk/examples/cross-benchmark/poker/pair_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/pair_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/pair_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -17,7 +17,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/*Background knowledge*/
import("pair50.owl");
Modified: trunk/examples/cross-benchmark/poker/pair_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/pair_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/pair_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -6,7 +6,7 @@
*/
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
/*Background knowledge*/
import("pair50.owl");
Modified: trunk/examples/cross-benchmark/poker/straight_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/straight_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/straight_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -18,7 +18,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("straight.owl");
/*Examples*/
Modified: trunk/examples/cross-benchmark/poker/straight_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/straight_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/straight_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -18,7 +18,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("straight.owl");
/*Examples*/
Modified: trunk/examples/cross-benchmark/poker/straight_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/poker/straight_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/poker/straight_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -8,7 +8,7 @@
/*Background knowledge*/
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
import("straight.owl");
/*Examples*/
Modified: trunk/examples/cross-benchmark/trains/trains_gp.conf
===================================================================
--- trunk/examples/cross-benchmark/trains/trains_gp.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/trains/trains_gp.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -17,7 +17,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
hidePrefix = "http://example.com/foo#";
Modified: trunk/examples/cross-benchmark/trains/trains_hybrid.conf
===================================================================
--- trunk/examples/cross-benchmark/trains/trains_hybrid.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/trains/trains_hybrid.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -17,7 +17,7 @@
gp.hillClimbingProbability = 0;
posNegDefinitionLP.percentPerLenghtUnit = 0.02;
gp.maxConceptLength = 30;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
hidePrefix = "http://example.com/foo#";
/*Background knowledge*/
Modified: trunk/examples/cross-benchmark/trains/trains_refexamples.conf
===================================================================
--- trunk/examples/cross-benchmark/trains/trains_refexamples.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/cross-benchmark/trains/trains_refexamples.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -7,7 +7,7 @@
algorithm = refexamples;
refexamples.useCardinalityRestrictions = false;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
hidePrefix = "http://example.com/foo#";
/*Background knowledge*/
Modified: trunk/examples/family/father_posonly.conf
===================================================================
--- trunk/examples/family/father_posonly.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/family/father_posonly.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -13,7 +13,7 @@
import("father.kb");
problem = posOnlyDefinitionLP;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
algorithm = refexamples;
refexamples.usePropernessChecks = true;
refexamples.maxPosOnlyExpansion = 4;
Modified: trunk/examples/krk/complete_no_draw.conf
===================================================================
--- trunk/examples/krk/complete_no_draw.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/krk/complete_no_draw.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -23,7 +23,7 @@
algorithm = refexamples;
reasoner=fastInstanceChecker;
-//reasoner=owlAPI;
+//reasoner=owlAPIReasoner;
//fastInstanceChecker.reasonerType = fact;
refexamples.useAllConstructor = false;
Modified: trunk/examples/semantic_bible/normal.conf
===================================================================
--- trunk/examples/semantic_bible/normal.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/semantic_bible/normal.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -16,7 +16,7 @@
//refexamples.ignoredConcepts = {"http://semanticbible.org/ns/2006/NTNames#God"};
//reasoner = fastInstanceChecker;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
owlAPIReasoner.reasonerType = pellet;
/** examples **/
Modified: trunk/examples/semantic_bible/normal_retrieval_special.conf
===================================================================
--- trunk/examples/semantic_bible/normal_retrieval_special.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/semantic_bible/normal_retrieval_special.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -16,7 +16,7 @@
//refexamples.ignoredConcepts = {"http://semanticbible.org/ns/2006/NTNames#God"};
//reasoner = fastInstanceChecker;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
owlAPIReasoner.reasonerType = pellet;
problem = posNegDefinitionLP;
Modified: trunk/examples/semantic_bible/sparqlbible.conf
===================================================================
--- trunk/examples/semantic_bible/sparqlbible.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/semantic_bible/sparqlbible.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -16,7 +16,7 @@
//refexamples.ignoredConcepts = {"http://semanticbible.org/ns/2006/NTNames#God"};
//reasoner = fastInstanceChecker;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
owlAPIReasoner.reasonerType = pellet;
/** examples **/
Modified: trunk/examples/semantic_bible/woman.conf
===================================================================
--- trunk/examples/semantic_bible/woman.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/semantic_bible/woman.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -14,7 +14,7 @@
//refexamples.ignoredConcepts = {"http://semanticbible.org/ns/2006/NTNames#God"};
reasoner = fastInstanceChecker;
-//reasoner = owlAPI;
+//reasoner = owlAPIReasoner;
//owlAPIReasoner.reasonerType = pellet;
/** examples **/
Modified: trunk/examples/sparql/govtrack.conf
===================================================================
--- trunk/examples/sparql/govtrack.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/sparql/govtrack.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -4,7 +4,7 @@
sparql.useLits = true;
algorithm = refexamples;
-reasoner = owlAPI;
+reasoner = owlAPIReasoner;
// reasoner = fastInstanceChecker;
import("http://www.govtrack.us/sparql","SPARQL");
Modified: trunk/examples/sparql/musicbrainz.conf
===================================================================
--- trunk/examples/sparql/musicbrainz.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/sparql/musicbrainz.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -13,7 +13,7 @@
sparql.useLits=true;
algorithm = refexamples;
-//reasoner = owlAPI;
+//reasoner = owlAPIReasoner;
reasoner = fastInstanceChecker;
Modified: trunk/examples/sparql/roles_notworking/Roles_fixed_DBPedia_monarch_range_yago.conf
===================================================================
--- trunk/examples/sparql/roles_notworking/Roles_fixed_DBPedia_monarch_range_yago.conf 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/examples/sparql/roles_notworking/Roles_fixed_DBPedia_monarch_range_yago.conf 2008-09-15 17:28:02 UTC (rev 1214)
@@ -18,7 +18,7 @@
sparql2.predefinedFilter=1;
// use DBpedia endpoint
-import("http://dbpedia.openlinksw.com:8890/sparql","SPARQL2");
+import("http://dbpedia.openlinksw.com:8890/sparql","SPARQL");
//***********ROLE SPECIFIC
Modified: trunk/src/dl-learner/org/dllearner/algorithms/refexamples/ExampleBasedNode.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/algorithms/refexamples/ExampleBasedNode.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/algorithms/refexamples/ExampleBasedNode.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -178,6 +178,29 @@
return ret;
}
+ public String getShortDescriptionHTML(int nrOfPositiveExamples, int nrOfNegativeExamples, String baseURI) {
+ String ret = "<html> " + concept.toString(baseURI,null) + " <i>[";
+
+ if(isTooWeak)
+ ret += "q:tw";
+ else {
+ double accuracy = 100 * (coveredPositives.size() + nrOfNegativeExamples - coveredNegatives.size())/(double)(nrOfPositiveExamples+nrOfNegativeExamples);
+ ret += "<b>acc: " + df.format(accuracy) + "% </b>";
+
+ // comment this out to display the heuristic score with default parameters
+ double heuristicScore = MultiHeuristic.getNodeScore(this, nrOfPositiveExamples, nrOfNegativeExamples);
+ ret += "h:" +df.format(heuristicScore) + " ";
+
+ int wrongPositives = nrOfPositiveExamples - coveredPositives.size();
+ ret += "q:" + wrongPositives + "p-" + coveredNegatives.size() + "n";
+ }
+
+ ret += " ("+qualityEvaluationMethod+"), he:" + horizontalExpansion;
+ ret += " c:" + children.size() + "]";
+
+ return ret + "</i></html>";
+ }
+
//TODO integrate this method with the one above
public String getStats(int nrOfPositiveExamples, int nrOfNegativeExamples) {
String ret = " [";
Modified: trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/gui/EBNodeTreeModel.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -22,6 +22,7 @@
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
+import java.util.SortedSet;
import java.util.TreeMap;
import javax.swing.event.TreeModelEvent;
@@ -92,6 +93,7 @@
}
+ @SuppressWarnings("unused")
private void fireTreeStructureChanged(ExampleBasedNode node) {
TreeModelEvent e = new TreeModelEvent(this,
new Object[] {node});
@@ -102,13 +104,25 @@
// convert the set of children to a list and store it in this model
private List<ExampleBasedNode> getChildren(ExampleBasedNode node) {
+// System.out.println("asking for children of " + node);
+
List<ExampleBasedNode> children = childrenMap.get(node);
// if the children have not been cached or the list is outdated
// (node has more children now) we do an update
if(children == null || children.size() != node.getChildren().size()) {
- children = new LinkedList<ExampleBasedNode>(node.getChildren());
+ SortedSet<ExampleBasedNode> childrenSet = node.getChildren();
+ children = new LinkedList<ExampleBasedNode>(childrenSet);
+
+ // we need to ensure that the children are sorted correctly
+// children = new LinkedList<ExampleBasedNode>();
+// for(ExampleBasedNode child : childrenSet) {
+// children.add(child);
+// }
+
childrenMap.put(node, children);
- fireTreeStructureChanged(node);
+
+// fireTreeStructureChanged(node);
+// System.out.println("updating children of " + node);
}
return children;
}
Modified: trunk/src/dl-learner/org/dllearner/gui/RunPanel.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/RunPanel.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/gui/RunPanel.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -31,7 +31,9 @@
import javax.swing.*;
+import org.dllearner.algorithms.refexamples.ExampleBasedROLComponent;
import org.dllearner.core.EvaluatedDescription;
+import org.dllearner.learningproblems.PosNegDefinitionLP;
/**
* @author Tilo Hielscher
@@ -82,8 +84,10 @@
stopButton.setEnabled(false);
stopButton.addActionListener(this);
showPanel.add(stopButton);
+
treeButton = new JButton("Tree");
treeButton.addActionListener(this);
+ treeButton.setEnabled(false);
showPanel.add(treeButton);
infoPanel.setLayout(gridbag);
@@ -182,8 +186,8 @@
}
// tree
if (e.getSource() == treeButton) {
- @SuppressWarnings("unused")
TreeWindow a = new TreeWindow(config);
+ a.setLocationRelativeTo(startGUI);
}
}
@@ -348,7 +352,17 @@
* Method is called when algorithm has terminated successfully.
*/
public void algorithmTerminated() {
+ // the methods called are similar to those when the stop button is pressed
stopButton.setEnabled(false);
runButton.setEnabled(true);
+ startGUI.enableTabbedPane();
+
+ System.out.println("TEST");
+
+ // enable tree button
+ if((config.getLearningAlgorithm() instanceof ExampleBasedROLComponent)
+ && (config.getLearningProblem() instanceof PosNegDefinitionLP)) {
+ treeButton.setEnabled(true);
+ }
}
}
Added: trunk/src/dl-learner/org/dllearner/gui/SearchTree.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/SearchTree.java (rev 0)
+++ trunk/src/dl-learner/org/dllearner/gui/SearchTree.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -0,0 +1,57 @@
+/**
+ * Copyright (C) 2007-2008, Jens Lehmann
+ *
+ * This file is part of DL-Learner.
+ *
+ * DL-Learner is free software; you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation; either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * DL-Learner is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ *
+ */
+package org.dllearner.gui;
+
+import javax.swing.JTree;
+
+import org.dllearner.algorithms.refexamples.ExampleBasedNode;
+
+/**
+ * Own JTree implemenation with improved formatting.
+ *
+ * @author Jens Lehmann
+ *
+ */
+public class SearchTree extends JTree {
+
+ private static final long serialVersionUID = 4509903171856747400L;
+
+ private int nrOfNegativeExamples;
+ private int nrOfPositiveExamples;
+ private String baseURI;
+
+ public SearchTree(EBNodeTreeModel model, int nrOfPositiveExamples, int nrOfNegativeExamples, String baseURI) {
+ super(model);
+ this.nrOfPositiveExamples = nrOfPositiveExamples;
+ this.nrOfNegativeExamples = nrOfNegativeExamples;
+ this.baseURI = baseURI;
+ }
+
+ @Override
+ public String convertValueToText(Object value,
+ boolean selected,
+ boolean expanded,
+ boolean leaf,
+ int row,
+ boolean hasFocus) {
+ ExampleBasedNode node = (ExampleBasedNode) value;
+ return node.getShortDescriptionHTML(nrOfPositiveExamples, nrOfNegativeExamples, baseURI);
+ }
+}
Modified: trunk/src/dl-learner/org/dllearner/gui/StartGUI.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/StartGUI.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/gui/StartGUI.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -171,6 +171,11 @@
setVisible(true);
updateTabs();
+ // load file
+ if(file != null) {
+ config.loadFile(file);
+ }
+
// Register a change listener
tabPane.addChangeListener(new ChangeListener() {
// This method is called whenever the selected tab changes
Modified: trunk/src/dl-learner/org/dllearner/gui/TreeWindow.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/gui/TreeWindow.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/gui/TreeWindow.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -20,13 +20,18 @@
*
*/
-import javax.swing.*;
+import java.util.Set;
+import javax.swing.JFrame;
+import javax.swing.JScrollPane;
+import javax.swing.JTree;
import javax.swing.event.TreeExpansionEvent;
import javax.swing.event.TreeWillExpandListener;
import javax.swing.tree.ExpandVetoException;
-import org.dllearner.algorithms.refexamples.*;
+import org.dllearner.algorithms.refexamples.ExampleBasedNode;
+import org.dllearner.algorithms.refexamples.ExampleBasedROLComponent;
+import org.dllearner.learningproblems.PosNegDefinitionLP;
/**
* TreeWindow
@@ -42,13 +47,14 @@
private EBNodeTreeModel ebNodeModel;
private ExampleBasedNode rootNode;
private JTree tree;
-
+
+ @SuppressWarnings("unchecked")
public TreeWindow(Config config) {
this.config = config;
this.setTitle("DL-Learner Tree");
this.setDefaultCloseOperation(JFrame.HIDE_ON_CLOSE);
- this.setLocationByPlatform(true);
- this.setSize(640, 300);
+// this.setLocationByPlatform(true);
+ this.setSize(800, 600);
// set icon
if (this.getClass().getResource("icon.gif") != null)
@@ -61,7 +67,7 @@
.getLearningAlgorithm();
this.rootNode = ebrol.getStartNode();
- System.out.println("childs1: " + rootNode.getChildren());
+// System.out.println("childs1: " + rootNode.getChildren());
this.ebNodeModel = new EBNodeTreeModel(rootNode);
@@ -71,15 +77,23 @@
// System.out.println("childs2: " +
// ebNodeModel.getChildren((ExampleBasedNode) first));
-
- tree = new JTree(ebNodeModel);
- tree.addTreeWillExpandListener(this);
+
+ // collect some helper values for display and accuracy calculations
+ PosNegDefinitionLP lp = (PosNegDefinitionLP) config.getLearningProblem();
+ Set<String> posExamples = lp.getConfigurator().getPositiveExamples();
+ Set<String> negExamples = lp.getConfigurator().getNegativeExamples();
+ String baseURI = config.getReasoningService().getBaseURI();
+ int nrOfPositiveExamples = posExamples.size();
+ int nrOfNegativeExamples = negExamples.size();
+
+ tree = new SearchTree(ebNodeModel, nrOfPositiveExamples, nrOfNegativeExamples, baseURI);
+// tree.addTreeWillExpandListener(this);
this.add(new JScrollPane(tree));
}
// }
- this.repaint();
- this.setVisible(true);
+// this.repaint();
+ setVisible(true);
}
/*
Modified: trunk/src/dl-learner/org/dllearner/test/junit/ExampleTests.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/test/junit/ExampleTests.java 2008-09-15 13:30:02 UTC (rev 1213)
+++ trunk/src/dl-learner/org/dllearner/test/junit/ExampleTests.java 2008-09-15 17:28:02 UTC (rev 1214)
@@ -83,6 +83,8 @@
ignore.add("./examples/sparql/scrobble.conf"); // HTTP 502 Proxy Error
ignore.add("./examples/family-benchmark/Cousin.conf"); // Out of Memory Error
ignore.add("./examples/sparql/SilentBobWorking2.conf"); // Out of Memory Error
+ ignore.add("./examples/family/father_posonly.conf"); // ArrayOutOfBoundsException in Pellet - main problem: pos only not working
+ ignore.add("./examples/sparql/difference/DBPediaSKOS_kohl_vs_angela.conf"); // Pellet: literal cannot be cast to individual
for (String path : confFiles.keySet()) {
for (String file : confFiles.get(path)) {
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