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From: <ku...@us...> - 2008-09-26 19:35:56
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Revision: 1277
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1277&view=rev
Author: kurzum
Date: 2008-09-26 19:35:49 +0000 (Fri, 26 Sep 2008)
Log Message:
-----------
server commit
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 19:30:02 UTC (rev 1276)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 19:35:49 UTC (rev 1277)
@@ -175,7 +175,9 @@
//total.printAndSet("Finished");
logger.warn(total.getAndSet("Finished"));
if(flawInExperiment){
- logger.error("There were exceptions");
+ logger.error("There were exceptions, see log");
+ }else{
+ logger.warn("The experiment finished without any flaws");
}
//logger.warn("Finished");
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From: <ku...@us...> - 2008-09-26 21:13:55
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Revision: 1281
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1281&view=rev
Author: kurzum
Date: 2008-09-26 21:13:44 +0000 (Fri, 26 Sep 2008)
Log Message:
-----------
schedule experiments
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 21:11:00 UTC (rev 1280)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 21:13:44 UTC (rev 1281)
@@ -251,7 +251,7 @@
EvaluatedDescription onOnto = reEvaluateDescription(
bestDescription.getDescription(), retrieved, posEx, negEx);
- logger.warn(onOnto.getDescription().toManchesterSyntaxString(null, null));
+ logger.warn(onOnto.getDescription().toKBSyntaxString());
logger.warn(onOnto.getAccuracy());
accOnOnto.addNumber(onOnto.getAccuracy());
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From: <ku...@us...> - 2008-09-29 08:09:45
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Revision: 1290
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1290&view=rev
Author: kurzum
Date: 2008-09-29 08:09:43 +0000 (Mon, 29 Sep 2008)
Log Message:
-----------
last experiment setup
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-29 07:37:09 UTC (rev 1289)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-29 08:09:43 UTC (rev 1290)
@@ -130,8 +130,8 @@
NORMAL_1000_CTESTS,
SPARQL_10000_CTESTS,
NORMAL_10000_CTESTS,
+
NORMAL_10000_CTESTS_FASTINST,
-
SPARQL_10000_CTESTS_SPECIAL_REC2_NOPROP,
SPARQL_10000_CTESTS_SPECIAL_REC2_NOCLOSEAFTERRECURSION,
SPARQL_10000_CTESTS_SPECIAL_REC1,
@@ -187,11 +187,11 @@
//conductExperiment(Experiments.SPARQL_1000_CTESTS);
//EXTRA
- conductExperiment(Experiments.NORMAL_10000_CTESTS_FASTINST);
conductExperiment(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC2_NOPROP);
conductExperiment(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC2_NOCLOSEAFTERRECURSION);
conductExperiment(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC1);
conductExperiment(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC3);
+ conductExperiment(Experiments.NORMAL_10000_CTESTS_FASTINST);
}
@@ -350,6 +350,9 @@
else if(exp.toString().contains("NORMAL")){
if(exp.equals(Experiments.NORMAL_10000_CTESTS_FASTINST)){
la = prepareNormalExperiment(true, posExamples, negExamples);
+ la.getConfigurator().setUseAllConstructor(false);
+ la.getConfigurator().setUseNegation(false);
+ la.getConfigurator().setUseCardinalityRestrictions(false);
}else{
la = prepareNormalExperiment(false, posExamples, negExamples);
}
@@ -409,6 +412,7 @@
c.setGetPropertyInformation(false);
}else if(exp.equals(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC2_NOCLOSEAFTERRECURSION)){
c.setCloseAfterRecursion(false);
+ c.setGetPropertyInformation(false);
}else if(exp.equals(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC1)){
c.setRecursionDepth(1);
}else if(exp.equals(Experiments.SPARQL_10000_CTESTS_SPECIAL_REC3)){
@@ -467,7 +471,8 @@
// reasoner
if(fic){
f = ComponentFactory.getFastInstanceChecker(tmp);
- ((FastInstanceChecker)f).getConfigurator().setDefaultNegation(false);
+ ((FastInstanceChecker)f).getConfigurator().setDefaultNegation(true);
+
}else{
f = ComponentFactory.getOWLAPIReasoner(tmp);
}
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From: <ku...@us...> - 2008-09-29 19:34:14
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Revision: 1312
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1312&view=rev
Author: kurzum
Date: 2008-09-29 19:33:54 +0000 (Mon, 29 Sep 2008)
Log Message:
-----------
server commit
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-29 19:27:01 UTC (rev 1311)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-29 19:33:54 UTC (rev 1312)
@@ -399,7 +399,7 @@
//defaultSettings:
c.setUseHasValueConstructor(false);
c.setUseBooleanDatatypes(true);
- c.setUseDoubleDatatypes(false);
+ c.setUseDoubleDatatypes(true);
if(exp.toString().contains("HASVALUE")){
c.setUseHasValueConstructor(true);
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From: <ku...@us...> - 2008-09-26 15:51:05
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Revision: 1271
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1271&view=rev
Author: kurzum
Date: 2008-09-26 15:50:40 +0000 (Fri, 26 Sep 2008)
Log Message:
-----------
server commit
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 15:08:38 UTC (rev 1270)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 15:50:40 UTC (rev 1271)
@@ -20,6 +20,7 @@
package org.dllearner.scripts;
import java.io.File;
+import java.io.IOException;
import java.net.MalformedURLException;
import java.net.URI;
import java.net.URL;
@@ -33,8 +34,10 @@
import org.apache.log4j.ConsoleAppender;
import org.apache.log4j.FileAppender;
+import org.apache.log4j.Layout;
import org.apache.log4j.Level;
import org.apache.log4j.Logger;
+import org.apache.log4j.PatternLayout;
import org.apache.log4j.SimpleLayout;
import org.dllearner.algorithms.refexamples.ExampleBasedROLComponent;
import org.dllearner.core.Component;
@@ -141,9 +144,13 @@
analyzeFiles(l);
for (Experiments exp : Experiments.values()) {
- if(exp.equals(Experiments.SPARQL_10s))continue;
+ //if(exp.equals(Experiments.SPARQL_10000_CONCEPT_TESTS))continue;
+ //if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))continue;
+ //if(exp.equals(Experiments.SPARQL_100s))continue;
+ //if(exp.equals(Experiments.NORMAL_100s))continue;
conductExperiment(exp);
- System.exit(0);
+ reinitStat();
+ //System.exit(0);
}
//conductExperiment(0);
@@ -152,7 +159,7 @@
File jamonlog = new File(dir+"jamon.html");
Files.createFile(jamonlog, MonitorFactory.getReport());
Files.appendFile(jamonlog, "<xmp>\n"+JamonMonitorLogger.getStringForAllSortedByLabel());
- total.printAndSet("Finished");
+ //total.printAndSet("Finished");
logger.warn(total.getAndSet("Finished"));
if(flawInExperiment){
logger.error("There were exceptions");
@@ -171,9 +178,9 @@
int count = 1;
for (String filename : confs) {
SimpleClock oneExperiment = new SimpleClock();
- if (count == 6){break;}
+ if (count == 2){break;}
- logger.warn(exp+" "+count +" from file "+filename);
+ logger.warn("****"+exp+" "+count +" from file "+filename);
// read the file and get the examples
File f = new File(exampleDir+filename);
@@ -241,7 +248,7 @@
fillTable(exp, count);
- logger.warn(exp+" "+count+ " " +oneExperiment.getAndSet("") );
+ logger.warn(exp+" "+count+ " " +oneExperiment.getAndSet("")+"****" );
count++;
}//end for
}catch (Exception e) {
@@ -255,11 +262,18 @@
int countDoublettes = 0;
SortedSet<String> differentIndividuals = new TreeSet<String>();
for ( String file : l) {
+ String fileContent = "";
+ try{fileContent = Files.readFile(new File(exampleDir+file));
+ }catch (Exception e) {
+ e.printStackTrace();
+ }
ExampleContainer ec = new ExampleContainer(
- SetManipulation.stringToInd(getIndividuals(file, true)),
- SetManipulation.stringToInd(getIndividuals(file, false)));
- differentIndividuals.addAll(getIndividuals(file, true));
- differentIndividuals.addAll(getIndividuals(file, false));
+ SetManipulation.stringToInd(getIndividuals(fileContent, true)),
+ SetManipulation.stringToInd(getIndividuals(fileContent, false)));
+
+ differentIndividuals.addAll(getIndividuals(fileContent, true));
+ differentIndividuals.addAll(getIndividuals(fileContent, false));
+
if(!ExampleContainer.add(ec)){
countDoublettes++;
}
@@ -464,7 +478,7 @@
- public static void reinitStat(){
+ private static void reinitStat(){
accFragment = new Stat();
accOnOnto = new Stat();
accPosExOnOnto = new Stat();
@@ -531,7 +545,6 @@
public static List<String> getFiles(){
String actualDir = exampleDir;
- logger.warn(actualDir);
File f = new File(actualDir);
String[] files = f.list();
Arrays.sort(files);
@@ -572,22 +585,32 @@
private static void initLogger() {
- SimpleLayout layout = new SimpleLayout();
- // create logger (a simple logger which outputs
- // its messages to the console)
- FileAppender fileAppender = null;
+ // logger 1 is the console, where we print only info messages;
+ // the logger is plain, i.e. does not output log level etc.
+ Layout layout = new PatternLayout();
+ ConsoleAppender consoleAppender = new ConsoleAppender(layout);
+ consoleAppender.setThreshold(Level.WARN);
+
+ // logger 2 is writes to a file; it records all debug messages
+ // and includes the log level
+ Layout layout2 = new SimpleLayout();
+ FileAppender fileAppenderNormal = null;
+ File f = new File("log/sparql.txt");
try {
- fileAppender = new FileAppender(layout, "log/semBibleLog.txt",
- false);
- } catch (Exception e) {
+ fileAppenderNormal = new FileAppender(layout2, "log/semBibleLog.txt", false);
+ f.delete();
+ f.createNewFile();
+ } catch (IOException e) {
e.printStackTrace();
}
-
- ConsoleAppender consoleAppender = new ConsoleAppender(layout);
+
+
+
logger.removeAllAppenders();
logger.addAppender(consoleAppender);
- logger.addAppender(fileAppender);
- logger.setLevel(Level.WARN);
+ logger.addAppender(fileAppenderNormal);
+ logger.setLevel(Level.DEBUG);
+
}
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From: <ku...@us...> - 2008-09-26 20:29:03
|
Revision: 1279
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1279&view=rev
Author: kurzum
Date: 2008-09-26 20:28:57 +0000 (Fri, 26 Sep 2008)
Log Message:
-----------
server commit
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 20:24:32 UTC (rev 1278)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 20:28:57 UTC (rev 1279)
@@ -156,13 +156,20 @@
}else{
+ /*finished experiments:
+ * SPARQL_10s
+ * SPARQL_1000_CONCEPT_TESTS
+ *
+ * */
+
for (Experiments exp : Experiments.values()) {
//if(exp.equals(Experiments.SPARQL_10000_CONCEPT_TESTS))continue;
//if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))continue;
//if(exp.equals(Experiments.SPARQL_100s))continue;
//if(exp.toString().contains("SPARQL"))continue;
- if(exp.equals(Experiments.SPARQL_10s))conductExperiment(exp);
- if(exp.equals(Experiments.SPARQL_1000_CONCEPT_TESTS))conductExperiment(exp);
+ if(exp.equals(Experiments.NORMAL_1000_CONCEPT_TESTS))conductExperiment(exp);
+ if(exp.equals(Experiments.SPARQL_10000_CONCEPT_TESTS))conductExperiment(exp);
+ if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))conductExperiment(exp);
//System.exit(0);
}
}
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From: <ku...@us...> - 2008-09-26 21:11:06
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Revision: 1280
http://dl-learner.svn.sourceforge.net/dl-learner/?rev=1280&view=rev
Author: kurzum
Date: 2008-09-26 21:11:00 +0000 (Fri, 26 Sep 2008)
Log Message:
-----------
schedule experiments
Modified Paths:
--------------
trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
Modified: trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java
===================================================================
--- trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 20:28:57 UTC (rev 1279)
+++ trunk/src/dl-learner/org/dllearner/scripts/SemanticBibleComparison.java 2008-09-26 21:11:00 UTC (rev 1280)
@@ -159,6 +159,10 @@
/*finished experiments:
* SPARQL_10s
* SPARQL_1000_CONCEPT_TESTS
+ * running:
+ * NORMAL_1000_CONCEPT_TESTS
+ * SPARQL_10000_CONCEPT_TESTS
+ * NORMAL_10000_CONCEPT_TESTS
*
* */
@@ -167,13 +171,16 @@
//if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))continue;
//if(exp.equals(Experiments.SPARQL_100s))continue;
//if(exp.toString().contains("SPARQL"))continue;
- if(exp.equals(Experiments.NORMAL_1000_CONCEPT_TESTS))conductExperiment(exp);
- if(exp.equals(Experiments.SPARQL_10000_CONCEPT_TESTS))conductExperiment(exp);
- if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))conductExperiment(exp);
- //System.exit(0);
+ if(exp.equals(Experiments.NORMAL_10s))conductExperiment(exp);
+ if(exp.equals(Experiments.SPARQL_100s))conductExperiment(exp);
+ if(exp.equals(Experiments.NORMAL_100s))conductExperiment(exp);
+ //~ if(exp.equals(Experiments.NORMAL_1000_CONCEPT_TESTS))conductExperiment(exp);
+ //~ if(exp.equals(Experiments.SPARQL_10000_CONCEPT_TESTS))conductExperiment(exp);
+ //~ if(exp.equals(Experiments.NORMAL_10000_CONCEPT_TESTS))conductExperiment(exp);
+
}
}
- //conductExperiment(0);
+
// write JaMON report in HTML file
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