ReducedSpace

Calculating the reduced space (get_space)

As with the full space, one must specify the rate constants for each dimension, and does so with the ‘par.rates’ field (and optionally the normalization with the ‘par.norm’ field). However, one must also specify Σ_ζR_ζ^(θ,S). Then, the elements specified in ‘par.red’ are added together to yield Σ_ζR_ζ^(θ,S), for example

par.rates={‘R11’,’R12’,’NOE1’};
par.red={‘R11’,’R12’,’R13’,’NOE1’};

or if using detector sensitivities

par.rates=[‘p1’,’p2’,’p3’];
par.red=[‘p1’,’p2’,’p3’,’p4’];

Here, we generate a 3D reduced space, normalized by the sum of four rate constants.