Re: [Denovoassembler-users] About Read Names in Ray Meta

[Boisvert, S. <boi...@an...>]

The reads are numbered using their ordering when concatenating
the input files.

________________________________
From: Namrata Patel [nam...@gm...]
Sent: Tuesday, June 09, 2015 11:48 PM
To: Boisvert, Sebastien
Subject: About Read Names in Ray Meta

Hello Sir,

I am Trying to run Ray Meta for my Metagenomic data, and i want to know which reads were used to form a particular Contig.

I tried to run Ray Meta with -amos option and it is giving me AMOS.afg file. When i am parsing this .afg file to get reads used in contigs, it gives me numbers instead of read names.

Please tell me what this numbers are or how can i get reads used in each contig.

Awaiting for Your Kind Response,

Thanking You,

Namrata Patel