<?xml version="1.0" encoding="utf-8"?>
<rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Recent changes to Home</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>Recent changes to Home</description><atom:link href="https://sourceforge.net/p/deepsee/wiki/Home/feed" rel="self"/><language>en</language><lastBuildDate>Tue, 12 Mar 2024 22:57:01 -0000</lastBuildDate><atom:link href="https://sourceforge.net/p/deepsee/wiki/Home/feed" rel="self" type="application/rss+xml"/><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v11
+++ v12
@@ -1,14 +1,12 @@
-# DeepSee &lt;a href="https://www.its.caltech.edu/~datavis/deepsee/" rel="nofollow"&gt;&lt;img align="right" height="38" rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/interface/public/icons/android-chrome-512x512.png"/&gt;&lt;/a&gt;
+# DeepSee &lt;a href="https://www.its.caltech.edu/~datavis/deepsee/" rel="nofollow"&gt;&lt;img align="right" height="38" rel="nofollow" src="https://raw.githubusercontent.com/orphanlab/DeepSee/main/interface/public/icons/android-chrome-512x512.png"/&gt;&lt;/a&gt;

-[![license](https://img.shields.io/badge/License-Apache--2.0-454295)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE)
-[![arxiv badge](https://img.shields.io/badge/arXiv-2403.04761-red)](https://arxiv.org/abs/2403.04761)
-[![DOI:10.1145/3613904.3642001](https://img.shields.io/badge/DOI-10.1145/3613904.3642001-blue)](https://doi.org/10.1145/3613904.3642001)
+[![license](https://img.shields.io/badge/License-Apache--2.0-454295)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE) [![arxiv badge](https://img.shields.io/badge/arXiv-2403.04761-red)](https://arxiv.org/abs/2403.04761) [![DOI:10.1145/3613904.3642001](https://img.shields.io/badge/DOI-10.1145/3613904.3642001-blue)](https://doi.org/10.1145/3613904.3642001)

 Visualize 3D interpolations of deep ocean biogeochemical sediment samples overlaid on 2D seafloor maps!

 🌊🛥️🦑🦀🐚

-![A screenshot of the DeepSee system](https://github.com/orphanlab/DeepSee/blob/main/images/deepsee.png)
+&lt;img rel="nofollow" src="https://raw.githubusercontent.com/orphanlab/DeepSee/main/images/deepsee.png" width="100%"/&gt;

 ## What is DeepSee?

@@ -27,19 +25,24 @@

 &lt;details&gt;
   &lt;summary&gt; 🗺️ Explore maps of the ocean floor overlaid with sampled cores from previous dives:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/map-view.png" width="50%"/&gt;
+  &lt;img rel="nofollow" src="https://raw.githubusercontent.com/orphanlab/DeepSee/main/images/map-view.png" width="50%"/&gt;
 &lt;/details&gt;
+
+&lt;img/&gt;

 &lt;details&gt;
   &lt;summary&gt; 📊 Compare geochemical, physical, and biological attributes across horizons between cores:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/core-view.png" width="55%"/&gt;
+  &lt;img rel="nofollow" src="https://raw.githubusercontent.com/orphanlab/DeepSee/main/images/core-view.png" width="55%"/&gt;
 &lt;/details&gt;
+
+&lt;img/&gt;

 &lt;details&gt;
   &lt;summary&gt; 🌐 Analyze interpolated core attributes in 3D between cores:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/interpolation-view.png"/&gt;
+  &lt;img rel="nofollow" src="https://raw.githubusercontent.com/orphanlab/DeepSee/main/images/interpolation-view.png" width="100%"/&gt;
 &lt;/details&gt;
-.
+
+&lt;img/&gt;

 ### Demo Video

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Tue, 12 Mar 2024 22:57:01 -0000</pubDate><guid>https://sourceforge.netf28b25708060494c95d38d5fc1f2accccfad6a06</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v10
+++ v11
@@ -1,15 +1,14 @@
 # DeepSee &lt;a href="https://www.its.caltech.edu/~datavis/deepsee/" rel="nofollow"&gt;&lt;img align="right" height="38" rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/interface/public/icons/android-chrome-512x512.png"/&gt;&lt;/a&gt;

-
-
 [![license](https://img.shields.io/badge/License-Apache--2.0-454295)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE)
+[![arxiv badge](https://img.shields.io/badge/arXiv-2403.04761-red)](https://arxiv.org/abs/2403.04761)
 [![DOI:10.1145/3613904.3642001](https://img.shields.io/badge/DOI-10.1145/3613904.3642001-blue)](https://doi.org/10.1145/3613904.3642001)

 Visualize 3D interpolations of deep ocean biogeochemical sediment samples overlaid on 2D seafloor maps!

 🌊🛥️🦑🦀🐚

-![The DeepSee System](https://github.com/orphanlab/DeepSee/blob/main/images/deepsee.png)
+![A screenshot of the DeepSee system](https://github.com/orphanlab/DeepSee/blob/main/images/deepsee.png)

 ## What is DeepSee?

@@ -21,8 +20,30 @@

 **[DeepSee: Multidimensional Visualizations of Seabed Ecosystems][paper]**  
 &lt;span style=""&gt;Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan&lt;/span&gt;  
-_ACM Conference on Human Factors in Computing Systems (CHI), 2024._  
-| [📖 Paper][paper] | [▶️ Live Demo][demo] | [🧑‍💻 Code][code] |
+_ACM Conference on Human Factors in Computing Systems (CHI), 2024_  
+| [📖 Paper][paper] | [▶️ Live Demo][demo] | [🎞️ Demo Video][video] | [🧑‍💻 Code][code] |
+
+## Features
+
+&lt;details&gt;
+  &lt;summary&gt; 🗺️ Explore maps of the ocean floor overlaid with sampled cores from previous dives:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/map-view.png" width="50%"/&gt;
+&lt;/details&gt;
+
+&lt;details&gt;
+  &lt;summary&gt; 📊 Compare geochemical, physical, and biological attributes across horizons between cores:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/core-view.png" width="55%"/&gt;
+&lt;/details&gt;
+
+&lt;details&gt;
+  &lt;summary&gt; 🌐 Analyze interpolated core attributes in 3D between cores:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/interpolation-view.png"/&gt;
+&lt;/details&gt;
+.
+
+### Demo Video
+
+🎞️ Watch the demo video for a full tutorial here: &amp;lt;https: youtu.be="" hj4zbuej9cs=""&amp;gt;

 ## Live Demo

@@ -30,7 +51,7 @@

 ## Getting Started

-✅ You can try DeepSee locally on your own computer by downloading it as pre-built software here!
+✅ You can try DeepSee locally on your own computer by downloading it as pre-built software!

 ### Windows

@@ -65,27 +86,9 @@
   3. Read the documentation for each of the sub-directories
   4. After you make changes to the data, simply reload the tool (e.g., in the open tool window, press `COMMAND+SHIFT+R`)

-## Features
-
-&lt;details&gt;
-  &lt;summary&gt; ✅ Explore maps of the ocean floor overlaid with sampled cores from previous dives:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/map-view.png" width="60%"/&gt;
-&lt;/details&gt;
-
-&lt;details&gt;
-  &lt;summary&gt; ✅ Compare geochemical, physical, and biological attributes across horizons between cores:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/core-view.png" width="60%"/&gt;
-&lt;/details&gt;
-
-&lt;details&gt;
-  &lt;summary&gt; ✅ Analyze interpolated core attributes in 3D between cores:&lt;/summary&gt;
-  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/interpolation-view.png" width="60%"/&gt;
-&lt;/details&gt;
-.
-
 ## Development

-🌱 If you want to customize DeepSee for your project, please visit our GitHub repository: &amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;
+🌱 If you want to customize DeepSee for your own project, please visit our GitHub repository: &amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;

 ## Credits

@@ -102,7 +105,7 @@

 ## Citation

-To learn more about DeepSee, please read our [research paper](https://adamcoscia.com/papers/deepsee/) (published at [CHI '24](https://adamcoscia.com/papers/deepsee/)).
+To learn more about DeepSee, please read our [research paper][paper] (published at [CHI '24](https://chi2024.acm.org/)).

 ```bibtex
 @inproceedings{Coscia:2024:DeepSee,
@@ -148,10 +151,9 @@

 ## Contact

-If you have any questions, feel free to contact [Adam Coscia](https://adamcoscia.com).
+If you have any questions, feel free to [open an issue](https://github.com/orphanlab/DeepSee/issues/new) or contact [Adam Coscia](https://adamcoscia.com).

-[paper]: https://adamcoscia.com/papers/deepsee/
+[paper]: https://arxiv.org/abs/2403.04761
 [demo]: https://www.its.caltech.edu/~datavis/deepsee/
-[video]: https://adamcoscia.com/papers/deepsee/
-[preview]: https://adamcoscia.com/papers/deepsee/
+[video]: https://youtu.be/HJ4zbueJ9cs
 [code]: https://github.com/orphanlab/DeepSee
&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Fri, 08 Mar 2024 14:16:48 -0000</pubDate><guid>https://sourceforge.netaa2051e7a65b1e4f1a1a2917e5ed4a2823daa58b</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v9
+++ v10
@@ -1,15 +1,15 @@
-# DeepSee &lt;a href="https://www.its.caltech.edu/~datavis/deepsee/" rel="nofollow"&gt;&lt;img align="right" height="38" rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/deepsee/interface/public/icons/android-chrome-512x512.png"/&gt;&lt;/a&gt;
+# DeepSee &lt;a href="https://www.its.caltech.edu/~datavis/deepsee/" rel="nofollow"&gt;&lt;img align="right" height="38" rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/interface/public/icons/android-chrome-512x512.png"/&gt;&lt;/a&gt;

 

-[![license](https://img.shields.io/badge/License-MIT-blue)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE)
+[![license](https://img.shields.io/badge/License-Apache--2.0-454295)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE)
 [![DOI:10.1145/3613904.3642001](https://img.shields.io/badge/DOI-10.1145/3613904.3642001-blue)](https://doi.org/10.1145/3613904.3642001)

 Visualize 3D interpolations of deep ocean biogeochemical sediment samples overlaid on 2D seafloor maps!

 🌊🛥️🦑🦀🐚

-![The DeepSee System](https://github.com/orphanlab/DeepSee/blob/main/deepsee.png)
+![The DeepSee System](https://github.com/orphanlab/DeepSee/blob/main/images/deepsee.png)

 ## What is DeepSee?

@@ -20,23 +20,21 @@
 This code accompanies the research paper:

 **[DeepSee: Multidimensional Visualizations of Seabed Ecosystems][paper]**  
-&lt;span style="color: grey;"&gt;Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan&lt;/span&gt;  
+&lt;span style=""&gt;Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan&lt;/span&gt;  
 _ACM Conference on Human Factors in Computing Systems (CHI), 2024._  
 | [📖 Paper][paper] | [▶️ Live Demo][demo] | [🧑‍💻 Code][code] |

 ## Live Demo

-For a live demo, visit: &amp;lt;https: www.its.caltech.edu="" ~datavis="" deepsee=""&amp;gt;
+🚀 For a live demo, visit: &amp;lt;https: www.its.caltech.edu="" ~datavis="" deepsee=""&amp;gt;

 ## Getting Started

-You can try DeepSee locally on your own computer by downloading it as pre-built software!
+✅ You can try DeepSee locally on your own computer by downloading it as pre-built software here!

 ### Windows

-Download DeepSee for Windows here:
-
-- &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.win.zip="" download=""&amp;gt;
+Download DeepSee for Windows here: &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.win.zip="" download=""&amp;gt;

 Run DeepSee:

@@ -52,9 +50,7 @@

 ### MacOS / Linux

-Download DeepSee for MacOS/Linux here:
-
-- &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.mac.zip="" download=""&amp;gt;
+Download DeepSee for MacOS/Linux here: &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.mac.zip="" download=""&amp;gt;

 Run DeepSee:

@@ -69,9 +65,27 @@
   3. Read the documentation for each of the sub-directories
   4. After you make changes to the data, simply reload the tool (e.g., in the open tool window, press `COMMAND+SHIFT+R`)

+## Features
+
+&lt;details&gt;
+  &lt;summary&gt; ✅ Explore maps of the ocean floor overlaid with sampled cores from previous dives:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/map-view.png" width="60%"/&gt;
+&lt;/details&gt;
+
+&lt;details&gt;
+  &lt;summary&gt; ✅ Compare geochemical, physical, and biological attributes across horizons between cores:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/core-view.png" width="60%"/&gt;
+&lt;/details&gt;
+
+&lt;details&gt;
+  &lt;summary&gt; ✅ Analyze interpolated core attributes in 3D between cores:&lt;/summary&gt;
+  &lt;img rel="nofollow" src="https://github.com/orphanlab/DeepSee/blob/main/images/interpolation-view.png" width="60%"/&gt;
+&lt;/details&gt;
+.
+
 ## Development

-Visit our GitHub repository (&amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;) to develop DeepSee for your own project!
+🌱 If you want to customize DeepSee for your project, please visit our GitHub repository: &amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;

 ## Credits

@@ -100,7 +114,7 @@
   address = {New York, NY, USA},
   url = {https://doi.org/10.1145/3613904.3642001},
   doi = {10.1145/3613904.3642001},
-  booktitle = {Proceedings of the 20024 CHI Conference on Human Factors in Computing Systems},
+  booktitle = {Proceedings of the 2024 CHI Conference on Human Factors in Computing Systems},
   location = {Honolulu, HI, USA},
   series = {CHI '24}
 }
@@ -122,17 +136,19 @@

 ## License

+The software is available under the [Apache-2.0 License](https://github.com/orphanlab/DeepSee/blob/main/LICENSE).
+
 Open Source License Approved by Caltech/JPL

 APACHE LICENSE, VERSION 2.0

-- Text version: https://www.apache.org/licenses/LICENSE-2.0.txt
+- Text version: &amp;lt;https: www.apache.org="" licenses="" license-2.0.txt=""&amp;gt;
 - SPDX short identifier: Apache-2.0
-- OSI Approved License: https://opensource.org/licenses/Apache-2.0
+- OSI Approved License: &amp;lt;https: opensource.org="" licenses="" apache-2.0=""&amp;gt;

 ## Contact

-If you have any questions, feel free to [open an issue](https://github.com/orphanlab/DeepSee/issues/new) or contact [Adam Coscia](https://adamcoscia.com).
+If you have any questions, feel free to contact [Adam Coscia](https://adamcoscia.com).

 [paper]: https://adamcoscia.com/papers/deepsee/
 [demo]: https://www.its.caltech.edu/~datavis/deepsee/
&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Tue, 05 Mar 2024 04:04:50 -0000</pubDate><guid>https://sourceforge.netc473f01399c2d884d000c0032b5292faed39c5a6</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v8
+++ v9
@@ -122,8 +122,6 @@

 ## License

-The software is available under the [MIT License](https://github.com/orphanlab/DeepSee/blob/main/LICENSE).
-
 Open Source License Approved by Caltech/JPL

 APACHE LICENSE, VERSION 2.0
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Fri, 23 Feb 2024 05:29:56 -0000</pubDate><guid>https://sourceforge.net6926a852db1e4326b9adf51814907680945038c7</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v7
+++ v8
@@ -36,7 +36,7 @@

 Download DeepSee for Windows here:

-- https://sourceforge.net/projects/deepsee/files/deepsee.win.zip/download
+- &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.win.zip="" download=""&amp;gt;

 Run DeepSee:

@@ -54,7 +54,7 @@

 Download DeepSee for MacOS/Linux here:

-- https://sourceforge.net/projects/deepsee/files/deepsee.mac.zip/download
+- &amp;lt;https: sourceforge.net="" projects="" deepsee="" files="" v0.1.0="" deepsee.mac.zip="" download=""&amp;gt;

 Run DeepSee:

&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Fri, 23 Feb 2024 02:46:25 -0000</pubDate><guid>https://sourceforge.net5b6c958f9cdc53b4d8ac63305d29838b437da06a</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v6
+++ v7
@@ -20,7 +20,7 @@
 This code accompanies the research paper:

 **[DeepSee: Multidimensional Visualizations of Seabed Ecosystems][paper]**  
-Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan  
+&lt;span style="color: grey;"&gt;Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan&lt;/span&gt;  
 _ACM Conference on Human Factors in Computing Systems (CHI), 2024._  
 | [📖 Paper][paper] | [▶️ Live Demo][demo] | [🧑‍💻 Code][code] |

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Fri, 23 Feb 2024 02:24:47 -0000</pubDate><guid>https://sourceforge.netd1ef894d76d2373222f268abcf31a418d251f190</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v5
+++ v6
@@ -69,7 +69,7 @@
   3. Read the documentation for each of the sub-directories
   4. After you make changes to the data, simply reload the tool (e.g., in the open tool window, press `COMMAND+SHIFT+R`)

-## Running Locally
+## Development

 Visit our GitHub repository (&amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;) to develop DeepSee for your own project!

&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Fri, 23 Feb 2024 02:23:52 -0000</pubDate><guid>https://sourceforge.net5555517ad8b41312f19c33c7a6bb59028574ada4</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v4
+++ v5
@@ -22,7 +22,7 @@
 **[DeepSee: Multidimensional Visualizations of Seabed Ecosystems][paper]**  
 Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, Victoria J. Orphan  
 _ACM Conference on Human Factors in Computing Systems (CHI), 2024._  
-| [📖 Paper][paper] | [▶️ Live Demo][demo] | [🎞️ Video][video] | [🧑‍💻 Code][code] |
+| [📖 Paper][paper] | [▶️ Live Demo][demo] | [🧑‍💻 Code][code] |

 ## Live Demo

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Thu, 22 Feb 2024 22:38:37 -0000</pubDate><guid>https://sourceforge.net11e3f2b1c345d010ba731811be383c4f3b024d15</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v3
+++ v4
@@ -36,7 +36,7 @@

 Download DeepSee for Windows here:

-- 
+- https://sourceforge.net/projects/deepsee/files/deepsee.win.zip/download

 Run DeepSee:

@@ -54,7 +54,7 @@

 Download DeepSee for MacOS/Linux here:

-- 
+- https://sourceforge.net/projects/deepsee/files/deepsee.mac.zip/download

 Run DeepSee:

@@ -71,7 +71,7 @@

 ## Running Locally

-Visit &amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt; for the developing DeepSee for your own project!
+Visit our GitHub repository (&amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt;) to develop DeepSee for your own project!

 ## Credits

&amp;lt;/https:&amp;gt;&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Thu, 22 Feb 2024 22:38:11 -0000</pubDate><guid>https://sourceforge.netcd0d04f0365a5868c0d96bf16936959f47e3993f</guid></item><item><title>Home modified by Adam Coscia</title><link>https://sourceforge.net/p/deepsee/wiki/Home/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v2
+++ v3
@@ -5,21 +5,17 @@
 [![license](https://img.shields.io/badge/License-MIT-blue)](https://github.com/orphanlab/DeepSee/blob/main/LICENSE)
 [![DOI:10.1145/3613904.3642001](https://img.shields.io/badge/DOI-10.1145/3613904.3642001-blue)](https://doi.org/10.1145/3613904.3642001)

-Visualize 3D interpolations of deep ocean biogeochemical sediment samples overlaid on 2D seafloor maps! 🌊🛥️🦑🦀🐚
+Visualize 3D interpolations of deep ocean biogeochemical sediment samples overlaid on 2D seafloor maps!
+
+🌊🛥️🦑🦀🐚

 ![The DeepSee System](https://github.com/orphanlab/DeepSee/blob/main/deepsee.png)

 ## What is DeepSee?

-Deep ocean researchers can now access 2D topographic maps and color photomosaics of the seafloor, allowing for the relation of point-source seafloor sample collections (e.g. sediment cores, rock, animal, and water samples) with their appropriate environmental context at centimeter to kilometer spatial scales.
-However, while 2D maps of spatial locations of samples are valuable, the field currently lacks visualization tools which extend into the 3rd dimension, i.e. within the subseafloor.
+Deep ocean researchers can now access 2D topographic maps and color photomosaics of the seafloor, allowing for the relation of point-source seafloor sample collections (e.g. sediment cores, rock, animal, and water samples) with their appropriate environmental context at centimeter to kilometer spatial scales. However, while 2D maps of spatial locations of samples are valuable, the field currently lacks visualization tools which extend into the 3rd dimension, i.e. within the subseafloor.

-DeepSee is an interactive workspace for scientists to upload sediment core data and map images and see their sampling history displayed across multiple connected views simultaneously.
-Interactive maps of the seafloor between centimeter and kilometer resolution are labeled with information about previous dives as well as collected samples.
-Alongside these maps, DeepSee displays 2D visualizations that show parameter gradients as a function of depth and interactive 3D visualizations of data interpolations in the space between samples.
-The data interpolations can be run in real time, allowing scientists to "see" below the seafloor and determine the most likely places to collect high-value samples.
-To support decision making, DeepSee provides annotation tools on the maps for taking notes, useful for communicating findings and planning future dives.
-Finally, DeepSee is portable and requires no internet access, empowering scientists to use DeepSee on field expeditions in remote environments.
+DeepSee is an interactive workspace for scientists to upload sediment core data and map images and see their sampling history displayed across multiple connected views simultaneously. Interactive maps of the seafloor between centimeter and kilometer resolution are labeled with information about previous dives as well as collected samples. Alongside these maps, DeepSee displays 2D visualizations that show parameter gradients as a function of depth and interactive 3D visualizations of data interpolations in the space between samples. The data interpolations can be run in real time, allowing scientists to "see" below the seafloor and determine the most likely places to collect high-value samples. To support decision making, DeepSee provides annotation tools on the maps for taking notes, useful for communicating findings and planning future dives. Finally, DeepSee is portable and requires no internet access, empowering scientists to use DeepSee on field expeditions in remote environments.

 This code accompanies the research paper:

@@ -38,15 +34,17 @@

 ### Windows

-- Download DeepSee for Windows here:
+Download DeepSee for Windows here:

-- Run DeepSee:
+- 
+
+Run DeepSee:

   1. Unzip the files to a new folder (e.g., named `DeepSee`)
   2. Inside the folder should be `DeepSee.exe`. Double-click that to run the visualizations interface
   3. Inside the folder should also be `interpolations.exe`. Double-click that to start the interpolations server

-- If you want to modify the data that DeepSee uses:
+If you want to modify the data that DeepSee uses:

   1. Inside the folder navigate to `resources\assets\`
   2. Read the documentation for each of the sub-directories
@@ -54,15 +52,17 @@

 ### MacOS / Linux

-- Download DeepSee for MacOS/Linux here:
+Download DeepSee for MacOS/Linux here:

-- Run DeepSee:
+- 
+
+Run DeepSee:

   1. Unzip the files to a new folder (e.g., named `DeepSee`)
   2. Inside the folder should be `DeepSee.app`. Double-click that to run the visualizations interface
   3. Inside the folder should also be `interpolations`. Double-click that to start the interpolations server

-- If you want to modify the data that DeepSee uses:
+If you want to modify the data that DeepSee uses:

   1. Right-click on `DeepSee.app` and select `Show Package Contents`
   2. Navigate to `Contents/Resources/assets/`
@@ -71,123 +71,13 @@

 ## Running Locally

-If you want to customize DeepSee or publish your own version, start here!
-
-- Install Node.js `v16.x` and npm `v7.x` by visiting ([release](https://nodejs.org/en/))
-- Install Python `v3.9.x` ([latest release](https://www.python.org/downloads/release/python-3913/))
-- Clone this repo to your computer ([instructions](https://docs.github.com/en/repositories/creating-and-managing-repositories/cloning-a-repository))
-
-```bash
-git clone git@github.com:orphanlab/DeepSee.git
-
-# use --depth if you don't want to download the whole commit history
-git clone --depth 1 git@github.com:orphanlab/DeepSee.git
-```
-
-### Interface
-
-- A frontend Vue.js v2 app to visualize data in the browser.
-- Additional details can be found in [deepsee/interface/README.md](https://github.com/orphanlab/DeepSee/blob/main/deepsee/interface/README.md)
-- To upload your own data, see [deepsee/interface/public/assets/README.md](https://github.com/orphanlab/DeepSee/blob/main/deepsee/interface/public/assets/README.md)
-
-Navigate to the interface folder:
-
-```bash
-cd deepsee/interface
-```
-
-Install dependencies:
-
-```(bash)
-npm install
-```
-
-Then run DeepSee:
-
-```(bash)
-npm run serve
-```
-
-Navigate to [localhost:8080](http://localhost:8080/). You should see DeepSee running in your browser :)
-
-### Server
-
-- A backend Python 3.9 Flask web app to process interpolations in the background
-- Additional details can be found in [deepsee/server/README.md](https://github.com/orphanlab/DeepSee/blob/main/deepsee/server/README.md)
-
-Navigate to the server folder:
-
-```bash
-cd deepsee/server
-```
-
-Install dependencies:
-
-- If you are running Windows:
-
-```bash
-# Start a virtual environment
-py -3.9 -m venv venv
-
-# Activate the virtual environment
-.\venv\Scripts\activate
-
-# Install dependencies
-python -m pip install -r requirements-win.txt
-```
-
-- If you are running MacOS / Linux:
-
-```bash
-# Start a virtual environment
-python3.9 -m venv venv
-
-# Activate the virtual environment
-source venv/bin/activate
-
-# Install dependencies
-python -m pip install -r requirements-mac.txt
-```
-
-Then run the server:
-
-```bash
-python app.py
-```
+Visit &amp;lt;https: github.com="" orphanlab="" deepsee=""&amp;gt; for the developing DeepSee for your own project!

 ## Credits

-DeepSee is a result of a collaboration between visualization experts in human-centered computing, interaction design, scientific data visualization and art, as well as scientists and researchers with expertise in environmental microbiology, geochemistry and geology from
-&lt;img alt="Interlocking GT" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/gt-logo.png" style="vertical-align: bottom;"/&gt;
-Georgia Tech,
-&lt;img alt="Caltech seal" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/caltech-seal.svg" style="vertical-align: bottom;"/&gt;
-Caltech,
-&lt;img alt="Artcenter dot" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/artcenter-logo.png" style="vertical-align: bottom;"/&gt;
-ArtCenter,
-&lt;img alt="MBARI logo" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/mbari-logo.svg" style="vertical-align: bottom;"/&gt;
-Monterey Bay Aquarium Research Institute (MBARI), and
-&lt;img alt="NASA logo" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/nasa-logo.png" style="vertical-align: bottom;"/&gt;
-NASA Jet Propulsion Laboratory (JPL).
+DeepSee is a result of a collaboration between visualization experts in human-centered computing, interaction design, scientific data visualization and art, as well as scientists and researchers with expertise in environmental microbiology, geochemistry and geology from &lt;img alt="Interlocking GT" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/gt-logo.png" style="vertical-align: bottom;"/&gt; Georgia Tech, &lt;img alt="Caltech seal" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/caltech-seal.svg" style="vertical-align: bottom;"/&gt; Caltech, &lt;img alt="Artcenter dot" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/artcenter-logo.png" style="vertical-align: bottom;"/&gt; ArtCenter, &lt;img alt="MBARI logo" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/mbari-logo.svg" style="vertical-align: bottom;"/&gt; Monterey Bay Aquarium Research Institute (MBARI), and &lt;img alt="NASA logo" height="21" rel="nofollow" src="https://adamcoscia.com/assets/icons/other/nasa-logo.png" style="vertical-align: bottom;"/&gt; NASA Jet Propulsion Laboratory (JPL).

-DeepSee is created by
-&lt;a href="https://adamcoscia.com/" rel="nofollow" target="_blank"&gt;Adam Coscia&lt;/a&gt;,
-Haley M. Sapers,
-Noah Deutsch,
-Malika Khurana,
-John S. Magyar,
-Sergio A. Parra,
-Daniel R. Utter,
-Rebecca L. Wipfler,
-David W. Caress,
-Eric J. Martin,
-Jennifer B. Paduan,
-Maggie Hendrie,
-Santiago Lombeyda,
-Hillary Mushkin,
-Alex Endert,
-Scott Davidoff,
-and
-Victoria J. Orphan.
+DeepSee is created by &lt;a href="https://adamcoscia.com/" rel="nofollow" target="_blank"&gt;Adam Coscia&lt;/a&gt;, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, and Victoria J. Orphan.

 ### Data

&amp;lt;/https:&amp;gt;&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Adam Coscia</dc:creator><pubDate>Thu, 22 Feb 2024 22:15:07 -0000</pubDate><guid>https://sourceforge.net5a93e36ded584eff6c0ab4fd21c2283d69838aad</guid></item></channel></rss>