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DeeProtGO
Activity
DeeProtGO Activity
DeeProtGO is a deep learning model for predicting GO terms of proteins
Brought to you by:
gabimerino
Summary
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Code
Activity for DeeProtGO
2 years ago
DeeProtGO
released
/data/processed/Training/Emb_CC_Euka.h5
2 years ago
DeeProtGO
released
/data/processed/Training/netOut_CC_Euka.h5
2 years ago
DeeProtGO
released
/data/processed/Training/Taxon_CC_Euka.h5
2 years ago
DeeProtGO
released
/data/processed/Training/PosEntries_Euka_CC.tab
2 years ago
DeeProtGO
released
/data/processed/Training/GOTermsPropRel_Euka_CC_train.tab
2 years ago
DeeProtGO
released
/data/processed/Training/NegEntries_Euka_CC.tab
2 years ago
DeeProtGO
released
/examples/train_NK_Euka_CC/DeeProtGO_PSD_Emb_Taxon_Euka_CC_NK.pt
2 years ago
DeeProtGO
released
/examples/train_NK_Euka_CC/valid_20082021.log
2 years ago
DeeProtGO
released
/examples/train_NK_Euka_CC/train_20082021.log
2 years ago
DeeProtGO
released
/examples/train_NK_Euka_CC/test_20082021.log
3 years ago
DeeProtGO
released
/data/extras/gene_ontology_edit.obo
3 years ago
DeeProtGO
released
/src/sampler.py
3 years ago
DeeProtGO
released
/src/earlyStop.py
3 years ago
DeeProtGO
released
/src/logger.py
3 years ago
DeeProtGO
released
/src/DNNModel.py
3 years ago
DeeProtGO
released
/src/dataloader.py
3 years ago
DeeProtGO
released
/src/DNN.py
3 years ago
DeeProtGO
released
/scripts/dataPreparation.ipynb
3 years ago
DeeProtGO
released
/scripts/DeeProtGOTraining.ipynb
3 years ago
DeeProtGO
released
/scripts/DeeProtGOTesting.ipynb
3 years ago
DeeProtGO
released
/examples/train_NK_Euka_BP/DeeProtGO_PSD_Emb_Taxon_Euka_BP_NK.pt
3 years ago
DeeProtGO
released
/examples/train_NK_Euka_BP/PSD_Emb_Taxoncheckpoint.pt
3 years ago
DeeProtGO
released
/examples/train_NK_EUKA_BP/PSD_Emb_Taxoncheckpoint.pt
3 years ago
DeeProtGO
released
/examples/train_NK_EUKA_BP/DeeProtGO_PSD_Emb_Taxon_Euka_BP_NK.pt
3 years ago
DeeProtGO
released
/examples/train_NK_Euka_BP/valid_13052021.log
3 years ago
DeeProtGO
released
/examples/train_NK_Euka_BP/train_13052021.log
3 years ago
DeeProtGO
released
/examples/train_NK_Euka_BP/test_13052021.log
3 years ago
DeeProtGO
released
/data/processed/Training/netOut_BP_Euka.h5
3 years ago
DeeProtGO
released
/data/processed/Training/LevSim_BP_Euka.h5
3 years ago
DeeProtGO
released
/data/processed/Training/Taxon_BP_Euka.h5
3 years ago
DeeProtGO
released
/data/processed/Training/PosEntries_Euka_BP.tab
3 years ago
DeeProtGO
released
/data/processed/Training/NegEntries_Euka_BP.tab
3 years ago
DeeProtGO
released
/data/processed/Training/Emb_BP_Euka.h5
3 years ago
DeeProtGO
released
/data/processed/Training/GOTermsPropRel_Euka_BP_train.tab
3 years ago
DeeProtGO
released
/data/intermediate/LevDist_negProteins.tab
3 years ago
DeeProtGO
released
/data/intermediate/propAnnot_Train_Euka_BP.tab
3 years ago
DeeProtGO
released
/data/intermediate/NetworkOutputNK_Euka_BP_Benchmark.tab
3 years ago
DeeProtGO
released
/data/intermediate/NetworkOutputNK_Euka_BP_Benchmark.tab
3 years ago
DeeProtGO
released
/data/intermediate/propAnnot_Bench_Euka_BP.tab
3 years ago
DeeProtGO
released
/data/intermediate/LevDist_posProteinsBenchTrain.tab
3 years ago
DeeProtGO
released
/data/intermediate/LevDist_posProteins.tab
3 years ago
DeeProtGO
released
/data/intermediate/LevDist_negProteinsBenchTrain.tab
3 years ago
DeeProtGO
released
/data/raw/trainingNKEukaBPInfo.tab
3 years ago
DeeProtGO
released
/data/raw/benchmarkNKEukaBPInfo.tab
3 years ago
Gabriela Merino
imported
Code
1