https://sourceforge.net/p/cvit/wiki/Home/Recent changes to HomeenWed, 11 Dec 2013 14:22:22 -0000https://sourceforge.net/p/cvit/wiki/Home/<div class="markdown_content"><pre>--- v1 +++ v2 @@ -1,8 +1,13 @@ -Welcome to your wiki! +**CViT - Chromosome Viewing Tool** -This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage]. +A collection of Perl scripts that enable quick visualizations of features on genetic sequence. Although primarily developed for whole genome visualizations, CViT can be used to display just about any sort of feature on a stretch of DNA, linkage group, or cytological chromosome. It can handle coordinates in base-pairs, centiMorgans, centiMcClintok, et cetera. Coordinates can be postive or negative, displayed in ascending or descending order. -The wiki uses [Markdown](/p/cvit/wiki/markdown_syntax/) syntax. +Uses include display of CGH data, genetic and cytogenetic maps, gene densities, syntenic chromosomal regions, chromosome structure (telomeres, centromeres, pericentromeres, heterchromatic regions). +Input data is one or more files containing GFF3 data. The output is either a PNG or SVG image. (SVG supported added in version 1.1) + +[Documentation](http://sourceforge.net/apps/mediawiki/cvit/index.php?title=Main_Page) + +[[project_screenshots]] [[members limit=20]] [[download_button]] </pre> </div>Ethalinda CannonWed, 11 Dec 2013 14:22:22 -0000https://sourceforge.net0e0cf7ecfa770edeed13b4cffb1bbc4e3d4c4c92https://sourceforge.net/p/cvit/wiki/Home/<div class="markdown_content"><p>Welcome to your wiki!</p> <p>This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: <span>[SamplePage]</span>.</p> <p>The wiki uses <a class="" href="/p/cvit/wiki/markdown_syntax/">Markdown</a> syntax.</p> <p><h6>Project Members:</h6><ul class="md-users-list"><li><a href="/u/cyentist/">Benjamin Mulaosmanovic</a></li><li><a href="/u/ekcannon/">Ethalinda Cannon</a> (admin)</li></ul><br /> </p><p><span class="download-button-517aaa93e88f3d0a8f60ff14" style="margin-bottom: 1em; display: block;"></span></p></div>Ethalinda CannonFri, 26 Apr 2013 16:25:59 -0000https://sourceforge.net01912ea475e6ee4c957ff710575c5278fdd29b06