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CUBiBit is a parallel tool to accelerate the search of biclusters on binary datasets using CUDA-enabled GPUs. This data mining procedure is especially useful for gene expression data. This tool receives as input a file with ARFF extension that contais the binary values of m attributes and n samples and returns a file with the biclustering information. It is able to exploit the parallel capabilities of manycore NVIDIA GPUS. It also makes use of C++11 multithreading support to accelerate one phase of the algorithm on several CPU cores.
License
GNU General Public License version 3.0 (GPLv3)Follow CUBiBit
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