CT-Finder

CT-Finder is a web service that allows a user to upload DNA sequences, set specifications according to experimental goals, and receive candidate guide RNA targets. Optimal candidates are suggested through consideration of predicted off-target effects. A visualization of on-target and off-target matches against the chosen reference genome is provided in JBrowse.

[1] Who are we?
Please visit our website http://bioinfolab.miamioh.edu

[2] How to cite CT-Finder?
Zhu, H. et al. CT-Finder: A Web Service for CRISPR Optimal Target Prediction and Visualization. Sci. Rep. 6, 25516; doi: 10.1038/srep25516 (2016). http://www.nature.com/articles/srep25516

[3] CT-Finder Installation manual
For user manual, please visit the Wiki page of this website.

[4] CT-Finder Q&A
For Q&A, please visit the Blog page of this website.

[5] CT-Finder bug report
You can report a bug as a Ticket request.

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