The release notes claim that we have upgraded Crux to include Percolator version 2.10, but this does not appear to be the case. I checked out the current trunk, compiled, and did crux version:
bash-4.1$ src/crux version
INFO: Beginning version.
====================
Crux version 3.0.17118
====================
Proteowizard version 3.0.9935
====================
Percolator version 2.09, Build Date Aug 5 2016 08:18:14
Copyright (c) 2006-9 University of Washington. All rights reserved.
Written by Lukas Käll (lukall@u.washington.edu) in the
Department of Genome Sciences at the University of Washington.
====================
Comet version 2016.01 rev. 1
====================
Boost version 1_56
====================
INFO: Elapsed time: 0.000112 s
INFO: Finished crux version.
INFO: Return Code:0
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