#384 Barista smoke test failure

[William S Noble]

One of the Barista smoke tests fails in the trunk. Full log is attached.

Failing Scenarios:
cucumber features/barista.feature:4 # Scenario: User runs barista

Jared can also look at this one. TeamCity only allows a single owner per issue.

[Alice Cheng]

I took a brief look at the output files and did a manual diff. It looks like what was causing the error was the header. One of the files use "Distinct Matches/Spectrum" while the other file simply uses "Matches/Spectrum"

I've attached the diff file below generated by the command:
diff barista.target.psms.txt barista-barista.target.psms.txt > baristadiff.txt

[Jared Moore]

I'm confused as to how this is happening. It has to be something with barista output because the current svn copy of the good barista file contains "distinct matches/spectrum" (which is the correct version), but I can't find anything in the qranker-barista directory that would print merely "matches/spectrum". I've run various iterations of

grep -r -e "\"matches /spectrum\"" .

[Kaipo]

I didn't know there was an issue for this, but I fixed it. Basically if there was existing test output, it wasn't getting overwritten so I just added the overwrite parameter to the test command. This can be closed now.

[Jared Moore]

excellent -- thanks!