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#346 Use smoothed database frequencies as basis for DP

Crux v2.0
open
p-values (1)
2015-10-07
2015-10-07
No

Rather than using a fixed set of amino acid frequencies, modify tide-index to store the amino acid frequencies of the database. At search time, combine those frequencies with a stored frequency vector derived from NRDB, using a user-specified pseudocount to weight the two.

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