#308 Seg fault from spectral-counts

[William S Noble]

I get a seg fault from the following command line:

bash-4.1$ ./runall
+ /net/noble/vol1/home/noble/proj/crux/trunk/release/src/crux spectral-counts --threshold 0.01 --threshold-type custom --custom-threshold-name 'tdc q-value' --custom-threshold-min T assign-confidence.target.txt
INFO: Beginning spectral-counts.
INFO: Writing results to output directory 'crux-output'.
INFO: CPU: pyrrolysine.gs.washington.edu
INFO: Fri Aug 21 14:54:08 PDT 2015
WARNING: No modification identifier found for mass shift 15.99.
Warning Suppressed, others may exist
INFO: Creating modification for 15.990000
INFO: Number of matches:117444
./runall: line 2: 15145 Segmentation fault (core dumped) /net/noble/vol1/home/noble/proj/crux/trunk/release/src/crux spectral-counts --threshold 0.01 --threshold-type custom --custom-threshold-name 'tdc q-value' --custom-threshold-min T assign-confidence.target.txt

The input and output files are attached.