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#3 Optimize computation of Sp scores in tide-search

Tide
open
Kaipo
tide (1)
2014-04-25
2013-07-23
Kaipo
No

Computing Sp scores in tide-search is slow. Attached is the profiling results with compute-sp on, we can see that GetIntensityArrayMean and GetIntensityArrayStdev take the most time, so that is a good place to start looking for possible optimizations.

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Discussion

  • William S Noble

    William S Noble - 2013-08-22
    • Milestone: Crux v2.0 --> post v2.0
     
  • William S Noble

    William S Noble - 2014-04-25
    • Milestone: post v2.0 --> Tide
     

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