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From: CORNEL <cor...@ya...> - 2008-10-02 09:30:22
|
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From: Thomas S. <dig...@di...> - 2008-09-25 23:57:54
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Hi Brian, Just a few observations. Your first 2 Location blocks will never work as Connotea is developed in mod perl and as such a PerlHandler must be set. /connotea should not be a folder in your /var/www. You should perhaps set a DocumentRoot in your site definition files to your location where the PerlHandler is. In this case, where your Bibliotech::Apache module is located. /connotea is a virtual directory which is handled by the PerlHandler. It does not exist physically, and if I remember right, Apache may not operate properly if that folder exists in its DocumentRoot for the site. Also ensure that you have mod_perl installed for apache. If you use debian/ubuntu distribution, try `a2enmod perl` Hope that helps, - Tom Spaziani Norchem Drug Testing Director of Information Technology Brian wrote: > I sent an e-mail to the connotea-discuss list yesterday, but now i've spent > most of another day trying to get this to work to no avail. You can see my > apache configuration, and the status codes the server returns, here: > http://pastebin.ca/1209592 > > I've systematically tried every combination of every parameter there. I've > read the apache documentation, read documentation on PTT, asked in #perl and > #apache on Freenode, and I simply cannot get Connotea going here. Your help > is appreciated! > > A side note, the list of CPAN modules should be modified to include: > Lingua::EN::NameParse HTTP::OAI::UserAgent Text::CSV Cache::Memcached > Template Authen::Captcha IPC::Run JSON > > Thanks, > Brian > > > |
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From: Brian <Bri...@co...> - 2008-09-25 18:53:43
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My last paste was supposed to be the output of 'desc meatadata', which simply reveals the existence of 'node_id'. On Thu, Sep 25, 2008 at 12:52 PM, Brian <Bri...@co...> wrote: > I am getting the following error when I try to look at a user library: > > Error exception report: > > user test (1) requests /user/test bringing load to 1 with db at 1222290807 > > http://grey.colorado.edu/connotea/user/test > > > undef error - DBD::mysql::st execute failed: Unknown column 'node' in 'where clause' [for Statement "SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'"] at /usr/local/share/perl/5.8.8/DBIx/ContextualFetch.pm line 52. > > > I can recreate this in mysql: > > mysql> use conwiki; > Reading table information for completion of table and column names > You can turn off this feature to get a quicker startup with -A > > Database changed > mysql> show tables; > +-------------------+ > | Tables_in_conwiki | > +-------------------+ > | content | > | internal_links | > | metadata | > | node | > > | schema_info | > +-------------------+ > 5 rows in set (0.00 sec) > > mysql> SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'; > ERROR 1054 (42S22): Unknown column 'node' in 'where clause' > > As you can see there is no 'node' column, but there is a 'node_id' column: > > mysql> use conwiki; > Reading table information for completion of table and column names > You can turn off this feature to get a quicker startup with -A > > Database changed > mysql> show tables; > +-------------------+ > | Tables_in_conwiki | > +-------------------+ > | content | > | internal_links | > | metadata | > | node | > > | schema_info | > +-------------------+ > 5 rows in set (0.00 sec) > > mysql> SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'; > ERROR 1054 (42S22): Unknown column 'node' in 'where clause' > > > Yet another serious bug in Connotea Code...? I see that none of my messages > to these lists are being let through moderation...a shame. > > > -- > (Not sent from my iPhone) > -- (Not sent from my iPhone) |
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From: Brian <Bri...@co...> - 2008-09-25 18:52:19
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I am getting the following error when I try to look at a user library: Error exception report: user test (1) requests /user/test bringing load to 1 with db at 1222290807 http://grey.colorado.edu/connotea/user/test undef error - DBD::mysql::st execute failed: Unknown column 'node' in 'where clause' [for Statement "SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'"] at /usr/local/share/perl/5.8.8/DBIx/ContextualFetch.pm line 52. I can recreate this in mysql: mysql> use conwiki; Reading table information for completion of table and column names You can turn off this feature to get a quicker startup with -A Database changed mysql> show tables; +-------------------+ | Tables_in_conwiki | +-------------------+ | content | | internal_links | | metadata | | node | | schema_info | +-------------------+ 5 rows in set (0.00 sec) mysql> SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'; ERROR 1054 (42S22): Unknown column 'node' in 'where clause' As you can see there is no 'node' column, but there is a 'node_id' column: mysql> use conwiki; Reading table information for completion of table and column names You can turn off this feature to get a quicker startup with -A Database changed mysql> show tables; +-------------------+ | Tables_in_conwiki | +-------------------+ | content | | internal_links | | metadata | | node | | schema_info | +-------------------+ 5 rows in set (0.00 sec) mysql> SELECT metadata_type, metadata_value FROM metadata WHERE node='User:test' AND version='0'; ERROR 1054 (42S22): Unknown column 'node' in 'where clause' Yet another serious bug in Connotea Code...? I see that none of my messages to these lists are being let through moderation...a shame. -- (Not sent from my iPhone) |
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From: Brian <Bri...@co...> - 2008-09-23 20:09:36
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I appear to have the exact same issue as this user: http://www.mail-archive.com/con...@li.../msg00099.html Who, I believe, never got a response. I've seen a couple more of these floating around. Unfortunate..:( /Brian On Tue, Sep 23, 2008 at 1:34 PM, Brian <Bri...@co...> wrote: > I sent an e-mail to the connotea-discuss list yesterday, but now i've spent > most of another day trying to get this to work to no avail. You can see my > apache configuration, and the status codes the server returns, here: > http://pastebin.ca/1209592 > > I've systematically tried every combination of every parameter there. I've > read the apache documentation, read documentation on PTT, asked in #perl and > #apache on Freenode, and I simply cannot get Connotea going here. Your help > is appreciated! > > A side note, the list of CPAN modules should be modified to include: > Lingua::EN::NameParse HTTP::OAI::UserAgent Text::CSV Cache::Memcached > Template Authen::Captcha IPC::Run JSON > > Thanks, > Brian > > > -- > (Not sent from my iPhone) > -- (Not sent from my iPhone) |
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From: Brian <Bri...@co...> - 2008-09-23 19:34:37
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I sent an e-mail to the connotea-discuss list yesterday, but now i've spent most of another day trying to get this to work to no avail. You can see my apache configuration, and the status codes the server returns, here: http://pastebin.ca/1209592 I've systematically tried every combination of every parameter there. I've read the apache documentation, read documentation on PTT, asked in #perl and #apache on Freenode, and I simply cannot get Connotea going here. Your help is appreciated! A side note, the list of CPAN modules should be modified to include: Lingua::EN::NameParse HTTP::OAI::UserAgent Text::CSV Cache::Memcached Template Authen::Captcha IPC::Run JSON Thanks, Brian -- (Not sent from my iPhone) |
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From: Oliver M. <o.m...@tu...> - 2008-07-31 15:35:12
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Hi all again, thank you for the explaining replies! But the problem still remains. One or some seconds would be ok for me, but its a delay from sometimes above 1 minute... Regards Oliver Quoting Martin Flack <ma...@ne...>: > Just to follow up again, there will always be a small delay, but it > should be on the order of a second at most. Please try it now and see > if it is a problem. > > Martin > > Oliver Marahrens wrote: >> Hi all, >> >> it seems to me, that bookmarks I post to Connotea using the Web-API >> are appearing in the API-Script >> http://www.connotea.org/data/user/xyz only after a delay. Example: >> I post something to the user tub and look if it worked in the >> normal web-interface. There is the new bookmark. But if I use >> http://www.connotea.org/data/user/tub, I don't see the new bookmark >> in that list. Waiting some time helps and the bookmark appears >> (how much time goes by is different). The effect is, that my >> application doesn't get the new data after posting and I cannot >> present the new post to the user immidiately. >> >> Is that happening with intent? Can I do something against it? >> >> Any feedback is appreciated, kind regards >> Oliver |
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From: Martin F. <ma...@ne...> - 2008-07-31 15:11:43
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Just to follow up again, there will always be a small delay, but it should be on the order of a second at most. Please try it now and see if it is a problem. Martin Oliver Marahrens wrote: > Hi all, > > it seems to me, that bookmarks I post to Connotea using the Web-API are > appearing in the API-Script http://www.connotea.org/data/user/xyz only > after a delay. Example: I post something to the user tub and look if it > worked in the normal web-interface. There is the new bookmark. But if I > use http://www.connotea.org/data/user/tub, I don't see the new bookmark > in that list. Waiting some time helps and the bookmark appears (how much > time goes by is different). The effect is, that my application doesn't > get the new data after posting and I cannot present the new post to the > user immidiately. > > Is that happening with intent? Can I do something against it? > > Any feedback is appreciated, kind regards > Oliver |
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From: Martin F. <ma...@ne...> - 2008-07-31 15:09:59
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Hello Oliver, This is not normal. We had an issue that caused the rss/data server to fall behind for a couple days and then it had to catch up. It should be resolved now. Martin Oliver Marahrens wrote: > Hi all, > > it seems to me, that bookmarks I post to Connotea using the Web-API are > appearing in the API-Script http://www.connotea.org/data/user/xyz only > after a delay. Example: I post something to the user tub and look if it > worked in the normal web-interface. There is the new bookmark. But if I > use http://www.connotea.org/data/user/tub, I don't see the new bookmark > in that list. Waiting some time helps and the bookmark appears (how much > time goes by is different). The effect is, that my application doesn't > get the new data after posting and I cannot present the new post to the > user immidiately. > > Is that happening with intent? Can I do something against it? > > Any feedback is appreciated, kind regards > Oliver |
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From: Mulvany, I. <i.m...@na...> - 2008-07-31 09:20:31
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Hi Oliver, At the moment we are splitting requests coming into Connotea between two machines to improve response times. API and RSS traffic goes to one machine and requests directly to the site go to another machine. The databaes gets replicated between the two machines with the API RSS machine being a slave of the main DB. Sometime last week we ran out of space on one of the partitions on the second machine, and after sorting out that problem the replication got turned off, but we didn't notice until Tuesday. It's been turned on again, and the rss and API requests are back in sync. - Ian Hi all, it seems to me, that bookmarks I post to Connotea using the Web-API are appearing in the API-Script http://www.connotea.org/data/user/xyz only after a delay. Example: I post something to the user tub and look if it worked in the normal web-interface. There is the new bookmark. But if I use http://www.connotea.org/data/user/tub, I don't see the new bookmark in that list. Waiting some time helps and the bookmark appears (how much time goes by is different). The effect is, that my application doesn't get the new data after posting and I cannot present the new post to the user immidiately. Is that happening with intent? Can I do something against it? Any feedback is appreciated, kind regards Oliver -- Oliver Marahrens TU Hamburg-Harburg / Universitätsbibliothek / Digitale Dienste Denickestr. 22 21073 Hamburg - Harburg eMail -- GPG/PGP-Schlüssel: http://www.tub.tu-harburg.de/keys/Oliver_Marahrens_pub.asc -- Projekt DISCUS http://discus.tu-harburg.de Projekt TUBdok http://doku.b.tu-harburg.de -- Ian Mulvany i.m...@na... +44(0)2078434756 www.nature.com www.connotea.org -- ******************************************************************************** DISCLAIMER: This e-mail is confidential and should not be used by anyone who is not the original intended recipient. If you have received this e-mail in error please inform the sender and delete it from your mailbox or any other storage mechanism. Neither Macmillan Publishers Limited nor any of its agents accept liability for any statements made which are clearly the sender's own and not expressly made on behalf of Macmillan Publishers Limited or one of its agents. Please note that neither Macmillan Publishers Limited nor any of its agents accept any responsibility for viruses that may be contained in this e-mail or its attachments and it is your responsibility to scan the e-mail and attachments (if any). No contracts may be concluded on behalf of Macmillan Publishers Limited or its agents by means of e-mail communication. Macmillan Publishers Limited Registered in England and Wales with registered number 785998 Registered Office Brunel Road, Houndmills, Basingstoke RG21 6XS ******************************************************************************** |
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From: Oliver M. <o.m...@tu...> - 2008-07-30 13:21:38
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Hi all, it seems to me, that bookmarks I post to Connotea using the Web-API are appearing in the API-Script http://www.connotea.org/data/user/xyz only after a delay. Example: I post something to the user tub and look if it worked in the normal web-interface. There is the new bookmark. But if I use http://www.connotea.org/data/user/tub, I don't see the new bookmark in that list. Waiting some time helps and the bookmark appears (how much time goes by is different). The effect is, that my application doesn't get the new data after posting and I cannot present the new post to the user immidiately. Is that happening with intent? Can I do something against it? Any feedback is appreciated, kind regards Oliver -- Oliver Marahrens TU Hamburg-Harburg / Universitätsbibliothek / Digitale Dienste Denickestr. 22 21073 Hamburg - Harburg eMail o.m...@tu... -- GPG/PGP-Schlüssel: http://www.tub.tu-harburg.de/keys/Oliver_Marahrens_pub.asc -- Projekt DISCUS http://discus.tu-harburg.de Projekt TUBdok http://doku.b.tu-harburg.de |
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From: m. <abc...@mc...> - 2008-07-10 07:00:01
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From: Martin F. <ma...@ne...> - 2008-04-29 19:28:23
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Ray Perkins wrote: > I am getting this same error using version 0.74 of Wiki::Toolkit. The > column 'node' does not exist in table 'metadata'. There is a 'node_id' field > in 'metadata', and a 'node' table with an 'id' key field for lookup. Do I need > a different version of Wiki::Toolkit? Hi Ray, connotea.org is running Wiki::Toolkit 0.74 and the metadata table has a node_id column. Are you sure that the correct version of Wiki::Toolkit is being loaded into memory? What do you get when you run this: perl -MWiki::Toolkit -e 'print $Wiki::Toolkit::VERSION, "\n"' Martin |
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From: Mulvany, I. <i.m...@na...> - 2008-04-25 09:21:41
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For the last few months these lists have been a bit quite in regards to news about Connotea, so I thought I would let you know about a few things that have been happening with the code and with the service. 1. Better import of RIS files. This week we rolled out an improvement to the import of RIS files to stop Connotea from mangling the tag format from PUBMED records. It seems to work a lot better now. You can read about it here: http://network.nature.com/blogs/user/http-network-nature-comprofileianmulvan y/2008/04/24/improved-import-of-ris-files-to-better-handle-pubmed-tag-terms 2. New items about Connotea One of the Nature press officers is now tracking news stories about Conntoea in connotea. You can follow them here: http://www.connotea.org/user/gracebaynes 3. More journals supported We added a module to understand journals on the Atypon (www.atypon.com) platform. This includes many academic journals and publisers such as the MIT press. You can read about this here: http://network.nature.com/blogs/user/http-network-nature-comprofileianmulvan y/2008/04/16/annual-reviews-now-supported 4. Client Side javascript We have just rolled out some client-side Javascript functions prepackaged to coordinate with Connotea. Showing Connotea Articles on Your Web Site You can display Connotea articles on your web site by using our remote Javascript facility. In the HTML <head> place the following HTML elements, replacing username with your Connotea username: <script type="text/javascript" src="http://www.connotea.org/remote.js">//</script> <script type="text/javascript" src="http://www.connotea.org/jsw/user/username">//</script> And in the HTML <head> also place this style block or add the rules into an existing style block: <style> .connotea { width: 350px; font-family: arial, helvetica, sans-serif } .connotea_head { background-color: #eeeeee; padding: 4px 1px 4px 1px } </style> The CSS is available for your customization. Elements are also marked with CSS classes for items, item, info, tags, tag, etc. In the HTML <body> place the following HTML element at the position where you would like a list of articles: <div id="connotea" class="connotea"></div> The script in the head will arrange for an event to be called when the site is loaded that fills the div in the body with the articles. Instead of /user/username in the second script element above, you can use other queries that yield articles, such as /tag/tagname or /user/username/tag/tagname. Placing to Add To Connotea Links on Your Web Site You can include "Add To Connotea" hyperlinks on your web site by using our remote Javascript facility. In the HTML <head> place the following HTML element: <script type="text/javascript" src="http://www.connotea.org/remote.js">//</script> In the HTML <body> place hyperlinks such as the following where you like: <a href="javascript:addToConnotea()">Add To Connotea</a> The addToConnotea Javascript function can also be used in onclick handlers. It optionally accepts a URL parameter and a title parameter, although these will default to the current page. As ever you can keep up to date on our Blog: http://www.connotea.org/blog - Ian -- Ian Mulvany i.m...@na... +44(0)2078434756 www.nature.com www.connotea.org -- ******************************************************************************** DISCLAIMER: This e-mail is confidential and should not be used by anyone who is not the original intended recipient. If you have received this e-mail in error please inform the sender and delete it from your mailbox or any other storage mechanism. Neither Macmillan Publishers Limited nor any of its agents accept liability for any statements made which are clearly the sender's own and not expressly made on behalf of Macmillan Publishers Limited or one of its agents. Please note that neither Macmillan Publishers Limited nor any of its agents accept any responsibility for viruses that may be contained in this e-mail or its attachments and it is your responsibility to scan the e-mail and attachments (if any). No contracts may be concluded on behalf of Macmillan Publishers Limited or its agents by means of e-mail communication. Macmillan Publishers Limited Registered in England and Wales with registered number 785998 Registered Office Brunel Road, Houndmills, Basingstoke RG21 6XS ******************************************************************************** |
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From: Ray P. <ray...@ra...> - 2008-04-23 13:55:18
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I am getting this same error using version 0.74 of Wiki::Toolkit. The column 'node' does not exist in table 'metadata'. There is a 'node_id' field in 'metadata', and a 'node' table with an 'id' key field for lookup. Do I need a different version of Wiki::Toolkit? |
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From: Mulvany, I. <i.m...@na...> - 2007-12-21 16:23:44
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This is just a short note to let you all know that the list is going to be silent over the holidays. This is because we now manually filter the list for spam, and I'm going to be out of the office until the 2nd of January. Have a good holiday season everyone, - Ian -- Ian Mulvany i.m...@na... +44(0)2078434756 www.nature.com www.connotea.org -- ******************************************************************************** DISCLAIMER: This e-mail is confidential and should not be used by anyone who is not the original intended recipient. If you have received this e-mail in error please inform the sender and delete it from your mailbox or any other storage mechanism. Neither Macmillan Publishers Limited nor any of its agents accept liability for any statements made which are clearly the sender's own and not expressly made on behalf of Macmillan Publishers Limited or one of its agents. Please note that neither Macmillan Publishers Limited nor any of its agents accept any responsibility for viruses that may be contained in this e-mail or its attachments and it is your responsibility to scan the e-mail and attachments (if any). No contracts may be concluded on behalf of Macmillan Publishers Limited or its agents by means of e-mail communication. Macmillan Publishers Limited Registered in England and Wales with registered number 785998 Registered Office Brunel Road, Houndmills, Basingstoke RG21 6XS ******************************************************************************** |
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From: Lyudmila L. B. <lu...@la...> - 2007-12-20 21:03:52
|
Hello, I still have problem with local installation: when I type in the browser: http://marmot.lanl.gov/bib/ I am getting "Internal Error This web application is experiencing an error. We apologize for the inconvenience. Would have returned 404 but in explain mode: Failed to process requested URI bad command (/var/www/html/bib/)" I have entry at http.conf: DocumentRoot "/var/www/html" PerlSwitches -I/home/ludab/connotea-code-1.8-beta PerlOptions +Parent PerlModule Bibliotech::Apache PerlModule Bibliotech::AuthCookie <Location /bib> SetHandler perl-script PerlResponseHandler Bibliotech::Apache PerlAuthenHandler Bibliotech::AuthCookie::authen_handler AuthName Bibliotech AuthType basic require valid-user ErrorDocument 503 /unavailable.html </Location> I have symlink at /var/www/html: bib -> /home/ludab/connotea-code-1.8-beta/site/default and my bibliotech.conf: SITE_NAME = 'bib' SITE_EMAIL = 'ad...@ex...' EXPLAIN_HTTP_CODES = true # optionally set document root and home page hyperlink, or they can # be detected DOCROOT = '/home/ludab/connotea-code-1.8-beta/site/default' LOCATION = 'http://marmot.lanl.gov/bib/' # set prepath if location has a component after the domain, # e.g. /bibliotech PREPATH = '/bib' TEMPLATE_ROOT = '' BIBUTILS_PATH = '/home/ludab/bibutils_3.39/' what else I need to do to get some default connotea behavior? Thank you Luda Luda |
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From: Martin F. <ma...@ne...> - 2007-12-20 16:28:30
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Hi Luda,
To track clicks you have to setup another database (sql/clicks.sql) and
setup a section in the config like this:
CLICKS {
# options regarding click tracking
# database connection details
DBI_CONNECT = 'dbi:mysql:clicks'
DBI_USERNAME = 'user'
DBI_PASSWORD = 'secret'
}
Perhaps I should make it optional as its quite important for
connotea.org but I imagine for outside instances it may not be so important.
Lyudmila L. Balakireva wrote:
> Hello,
> I am installing connotea and I have problem to restart apache:
>
> Starting httpd: [Wed Dec 19 13:14:56 2007] [error] Configuration variable
> CLICKS > DBI_CONNECT required by Bibliotech::Clicks but not
> found.\nCompilation failed in require at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/Component/AdminStats.pm line
> 14.\nBEGIN failed--compilation aborted at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/Component/AdminStats.pm line
> 14.\nCompilation failed in require at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/WebAPI.pm line 205.\nBEGIN
> failed--compilation aborted at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/WebAPI.pm line
> 205.\nCompilation failed in require at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/Apache.pm line 21.\nBEGIN
> failed--compilation aborted at
> /home/ludab/connotea-code-1.8-beta/Bibliotech/Apache.pm line
> 21.\nCompilation failed in require at (eval 2) line 3.\n
> [Wed Dec 19 13:14:56 2007] [error] Can't load Perl module
> Bibliotech::Apache for server marmot.lanl.gov:0, exiting...
>
> I have /etc/bibliotech.conf
> with
> DBI_CONNECT = 'dbi:mysql:bibliotech'
> DBI_USERNAME = 'lib'
> ...
>
> what can cause such a problem?
>
> Thank you,Luda
|
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From: Martin F. <ma...@ne...> - 2007-12-20 16:25:31
|
Benjamin Good wrote: > Thanks, working much better now. > > For queries like this, how are the results ordered? > > For example, if I wanted to page through a list of 2000 unique > bookmarks, 100 at a time, would I be safe to issue a series of requests > like: > http://www.connotea.org/data/bookmarks?num=100&start=0 > http://www.connotea.org/data/bookmarks?num=100&start=100 > .. > > is there any chance the resultsets would overlap? Is there a minimum > interval between requests that would guarantee that the numbering > remains consistent? The results are ordered by bookmark creation time - the timestamp that the first user submitted that particular URL. You do have a shift problem that arises from paging through a changing dataset. I have not seen a good solution to this in any API on the web to date. I thought about it recently, speculating that we might solve that problem, but hadn't got around to it. I think you could solve the stepping over of running additions it with an additional parameter for initial timestamp or id, but there is also the problem of running deletions. Martin |
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From: Benjamin G. <go...@in...> - 2007-12-20 15:51:54
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Thanks, working much better now. For queries like this, how are the results ordered? For example, if I wanted to page through a list of 2000 unique bookmarks, 100 at a time, would I be safe to issue a series of requests like: http://www.connotea.org/data/bookmarks?num=100&start=0 http://www.connotea.org/data/bookmarks?num=100&start=100 .. is there any chance the resultsets would overlap? Is there a minimum interval between requests that would guarantee that the numbering remains consistent? cheers -Ben On Dec 20, 2007, at 1:06 AM, Martin Flack wrote: > Benjamin Good wrote: >> Is there anything wrong with this request for any two bookmarks ? >> http://www.connotea.org/data/bookmarks?num=2&start=0 >> Why does it time out? >> thanks >> -Ben > > This query should come back in a much more reasonable amount of > time now. > > Martin > |
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From: Mulvany, I. <i.m...@na...> - 2007-12-20 11:44:15
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Hi Ben, The request works for me, so the time out issue is a performance issue and not related to API problems. We have been having some hiccups in December and we are looking into them. - Ian On 19/12/07 20:07, "con...@li..." <con...@li...> wrote: > Send Connotea-code-devel mailing list submissions to > con...@li... > > To subscribe or unsubscribe via the World Wide Web, visit > https://lists.sourceforge.net/lists/listinfo/connotea-code-devel > or, via email, send a message with subject or body 'help' to > con...@li... > > You can reach the person managing the list at > con...@li... > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Connotea-code-devel digest..." > > > Today's Topics: > > 1. failing request (Benjamin Good) > 2. Re: Throttling (Martin Flack) > 3. Re: Throttling (Martin Flack) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Tue, 18 Dec 2007 13:41:38 -0800 > From: Benjamin Good <go...@in...> > Subject: [Connotea-code-devel] failing request > To: con...@li... > Message-ID: <CCA...@in...> > Content-Type: text/plain; format=flowed; charset=US-ASCII > > Is there anything wrong with this request for any two bookmarks ? > > http://www.connotea.org/data/bookmarks?num=2&start=0 > > Why does it time out? > > thanks > -Ben > > > > > > ------------------------------ > > Message: 2 > Date: Tue, 18 Dec 2007 17:29:07 -0500 > From: Martin Flack <ma...@ne...> > Subject: Re: [Connotea-code-devel] Throttling > To: Christopher Townson <c.t...@na...> > Cc: con...@li... > Message-ID: <476...@ne...> > Content-Type: text/plain; charset=ISO-8859-1; format=flowed > > Christopher Townson wrote: >> How does the throttling work for the Connotea server? >> >> I'm wondering because API calls that get refused receive HTML (rather than >> RDF or XML, which is not ideal to have to handle as a client). >> >> Would it be possible to get the server to return an RDF message when API >> calls are refused? This could also make the reasoning clear by providing a >> human-readable error message. > > Hi Chris, > > We may do this at some point. Throttling just happens earlier in the > process. > > What we actually advise is to first refer to the HTTP status code. For > 503 as the return code you can stop and loop for a retry after a pause. > > For API access, you should say "WWW::Connotea" in your outbound > User-Agent header, which will be recognized on our end for a bit of > extra help. (The Perl API wrapper, if not all of them, should do this > for you.) > > This page describes the throttling algorithm: > http://www.connotea.org/wiki/Throttling > > Regards, > Martin Flack > > > > ------------------------------ > > Message: 3 > Date: Tue, 18 Dec 2007 17:49:22 -0500 > From: Martin Flack <ma...@ne...> > Subject: Re: [Connotea-code-devel] Throttling > To: Christopher Townson <c.t...@na...> > Cc: con...@li... > Message-ID: <476...@ne...> > Content-Type: text/plain; charset=ISO-8859-1; format=flowed > > Christopher Townson wrote: >> How does the throttling work for the Connotea server? >> >> I'm wondering because API calls that get refused receive HTML (rather than >> RDF or XML, which is not ideal to have to handle as a client). >> >> Would it be possible to get the server to return an RDF message when API >> calls are refused? This could also make the reasoning clear by providing a >> human-readable error message. > > Ah, just realized to which "Chris" I was replying. ;-) If you need me to > change the API 503 to RDF, I'll be happy to take care of it for you. ;-) > > Cheers, > Martin > > > > > ------------------------------ > > ------------------------------------------------------------------------- > SF.Net email is sponsored by: > Check out the new SourceForge.net Marketplace. > It's the best place to buy or sell services > for just about anything Open Source. > http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.net/marketplace > > ------------------------------ > > _______________________________________________ > Connotea-code-devel mailing list > Con...@li... > https://lists.sourceforge.net/lists/listinfo/connotea-code-devel > > > End of Connotea-code-devel Digest, Vol 20, Issue 4 > ************************************************** -- Ian Mulvany i.m...@na... +44(0)2078434756 www.nature.com www.connotea.org -- ******************************************************************************** DISCLAIMER: This e-mail is confidential and should not be used by anyone who is not the original intended recipient. If you have received this e-mail in error please inform the sender and delete it from your mailbox or any other storage mechanism. Neither Macmillan Publishers Limited nor any of its agents accept liability for any statements made which are clearly the sender's own and not expressly made on behalf of Macmillan Publishers Limited or one of its agents. Please note that neither Macmillan Publishers Limited nor any of its agents accept any responsibility for viruses that may be contained in this e-mail or its attachments and it is your responsibility to scan the e-mail and attachments (if any). No contracts may be concluded on behalf of Macmillan Publishers Limited or its agents by means of e-mail communication. Macmillan Publishers Limited Registered in England and Wales with registered number 785998 Registered Office Brunel Road, Houndmills, Basingstoke RG21 6XS ******************************************************************************** |
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From: Martin F. <ma...@ne...> - 2007-12-20 09:06:24
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Benjamin Good wrote: > Is there anything wrong with this request for any two bookmarks ? > > http://www.connotea.org/data/bookmarks?num=2&start=0 > > Why does it time out? > > thanks > -Ben This query should come back in a much more reasonable amount of time now. Martin |
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From: Lyudmila L. B. <lu...@la...> - 2007-12-19 20:19:27
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Hello, I am installing connotea and I have problem to restart apache: Starting httpd: [Wed Dec 19 13:14:56 2007] [error] Configuration variable CLICKS > DBI_CONNECT required by Bibliotech::Clicks but not found.\nCompilation failed in require at /home/ludab/connotea-code-1.8-beta/Bibliotech/Component/AdminStats.pm line 14.\nBEGIN failed--compilation aborted at /home/ludab/connotea-code-1.8-beta/Bibliotech/Component/AdminStats.pm line 14.\nCompilation failed in require at /home/ludab/connotea-code-1.8-beta/Bibliotech/WebAPI.pm line 205.\nBEGIN failed--compilation aborted at /home/ludab/connotea-code-1.8-beta/Bibliotech/WebAPI.pm line 205.\nCompilation failed in require at /home/ludab/connotea-code-1.8-beta/Bibliotech/Apache.pm line 21.\nBEGIN failed--compilation aborted at /home/ludab/connotea-code-1.8-beta/Bibliotech/Apache.pm line 21.\nCompilation failed in require at (eval 2) line 3.\n [Wed Dec 19 13:14:56 2007] [error] Can't load Perl module Bibliotech::Apache for server marmot.lanl.gov:0, exiting... I have /etc/bibliotech.conf with DBI_CONNECT = 'dbi:mysql:bibliotech' DBI_USERNAME = 'lib' ... what can cause such a problem? Thank you,Luda |
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From: Martin F. <ma...@ne...> - 2007-12-19 18:45:33
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Benjamin Good wrote: > Is there anything wrong with this request for any two bookmarks ? > > http://www.connotea.org/data/bookmarks?num=2&start=0 > > Why does it time out? > > thanks > -Ben Hi Ben, It's not your fault. We're having issues with the database getting overwhelmed at the moment. We're looking into it. Martin |
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From: Martin F. <ma...@ne...> - 2007-12-18 22:49:31
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Christopher Townson wrote: > How does the throttling work for the Connotea server? > > I'm wondering because API calls that get refused receive HTML (rather than > RDF or XML, which is not ideal to have to handle as a client). > > Would it be possible to get the server to return an RDF message when API > calls are refused? This could also make the reasoning clear by providing a > human-readable error message. Ah, just realized to which "Chris" I was replying. ;-) If you need me to change the API 503 to RDF, I'll be happy to take care of it for you. ;-) Cheers, Martin |
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