uncommenting out XML::Simple
changing XML::Simple to XML::Parser due to errors from XMLin subroutine
Add score to dummy HMM return value.
Fix HMM lookup bug: code doesn't support intermingling of old and new ids.
Improve error checking for HMM lookups.
Manatee ORF_infopage.cgi expects numeric value for 'curated' field.
Make query compatible with default sql_mode=only_full_group_by in MySQL 5.7.5+.
forgot to revert to using the environmental pat...
Modifying the command for SignalP that Manatee ...
copying Manatee for staging/preview
Changing the logic for extracting multiple refe...
Copying Coati for staging
going back to original uncommented version of s...
fixed syntax error from previous commit
fixing issue where only one pseudomolecule gets...
tagging multiseq changes
some syntax stylizing
fixed to where older staged BER files can work ...
fixed to where older staged BER files can work ...
fixed to where older staged BER files can work ...
reverting back to previous revision
fixed incompatability bug with multiseq pipelin...
added Google Analytics tracking parameters
fixed debugging statements
fixed broken logger debug statements
fixed some broken logger debug statements
modified a couple subroutines to help with new ...
added new subroutines to supercede existing sub...