does it work with reads of length > 36 bp. Seems not.
Brought to you by:
mcschatz
This is part of the *** /task-attempts/attempt_***/ logfiles that were
placed on S3, after running cloudburst via AWS Management Console
and Elastic MapReduce:
java.io.IOException: ERROR: seqlen=38 > MAX_READ_LEN=36 in s3n://*****br ref:s3n://****br
at cloudBurst.MerReduce$MapClass.map(Unknown Source)
at cloudBurst.MerReduce$MapClass.map(Unknown Source)
at org.apache.hadoop.mapred.MapRunner.run(MapRunner.java:47)
at org.apache.hadoop.mapred.MapTask.run(MapTask.java:227)
at org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2210)