Activity for Citrus
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Federico Giorgi committed [r277]
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Aris committed [r274]
Branch created for implementing edge filtering using bootstrap statistics, instead of the Poisson model.
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Branch created for implementing edge filtering using bootstrap statistics, instead of the Poisson model.
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Introduced a "root" variable, to isolate the specifics of the local environment within a single variable definition.
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Rewrote method "rankVector" for efficient implementation (O(nlogn) versus the old version which was O(n^2)).
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Citrus released /Cindy.jar
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Cindy was fixed in the consolidation step
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Working great before experimenting on the Poiss...
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Updated Cindy executable to the fixed version
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BUG FIX for data containing lots of identical v...
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Now an ECLIPSE MARS project
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Home
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Alexander Lachmann committed [r244]
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Fixed the build files
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Aracne 1.3beta with implemented --nodpi and --n...
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This is the stable version as of May 27, before...
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jinghe committed [r231]
PASS: work flow to run pARANCe
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fixed NA MI first split
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paracne supporting NA values
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Finsihed paracne with nodpi
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Paracne finished
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Changed some ExpressionMAtrix parsing for NA va...
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Initializing the pAracne algorithm
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Diggit is running for fCNVs
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Diggit is running for fCNVs
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Started conversion of Diggit into Java
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Removed unnecessary code
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Fixed a few issues in the --nodpi mode
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