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[CIShell-SVN] SF.net SVN: cishell: [517] trunk/testing/org.cishell.testing. convertertester.core.new/src/org/cishell/testing/convertertester/core/ test_files
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From: <mwl...@us...> - 2007-09-12 18:00:13
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Revision: 517
http://cishell.svn.sourceforge.net/cishell/?rev=517&view=rev
Author: mwlinnem
Date: 2007-09-12 11:00:09 -0700 (Wed, 12 Sep 2007)
Log Message:
-----------
Added support for .mat, and removed some of the bigger graphs that were causing the mat converter to take ages.
Modified Paths:
--------------
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/filetypes.conf
Added Paths:
-----------
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webattrexample.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webparseinfoattr.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/wikipedia.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/FlyMINT.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TF_DNA_regulonDB.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek MAT Files/
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek MAT Files/WorldCities.mat
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/1.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/1CRN.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/AHO3.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/LINKS.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/MREZAS1.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/SHORT.NET
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/TreeML Files/webexample.treeml.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/XGMML Files/xmlhackexample.xgmml.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/XGMML Files/xmlhackjavacourse.xgmml.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/XGMML Files/xmlhackvcard.xgmml.xml
Removed Paths:
-------------
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgeattributes1.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount1.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount2.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency1.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency2.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency3.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor1.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor2.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor3.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor4.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor5.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes2.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes3.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes4.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodecount2.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NET Files/
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TestFile2.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TestFile4.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TestFile5.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TestFile6.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TestFile7.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/TestFile2.net
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/Pajek NET Files/TestFile3nocomment.net
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/TestFile8.net.1.nwb
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/TestFile8.net.1.nwb.1.xml
trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/TestFile8.net.1.xml
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgeattributes1.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgeattributes1.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgeattributes1.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,35 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<key id="label" for="node" attr.name="label" attr.type="string"/>
-<key id="label" for="edge" attr.name="label" attr.type="string"/>
-<graph edgedefault="directed">
-<node id="0">
-<data key="label">A</data>
-</node>
-<node id="1">
-<data key="label">B</data>
-</node>
-<node id="2">
-<data key="label">C</data>
-</node>
-<node id="3">
-<data key="label">D</data>
-</node>
-<edge id="0" source="0" target="1">
-<data key="label">Monkey</data>
-</edge>
-<edge id="1" source="0" target="3">
-<data key="label">Warthog</data>
-</edge>
-<edge id="2" source="1" target="0">
-<data key="label">Salmon</data>
-</edge>
-<edge id="3" source="3" target="2">
-<data key="label">Hawk</data>
-</edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount1.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount1.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount1.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount2.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount2.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgecount2.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-<edge id="3" source="1" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency1.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency1.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency1.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="directed">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency2.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency2.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency2.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="directed">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="2"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="1"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency3.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency3.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/edgefrequency3.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="directed">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor1.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor1.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor1.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="directed">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor2.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor2.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor2.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="directed">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="2" target="3"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor3.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor3.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor3.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-<edge id="3" source="1" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor4.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor4.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor4.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,18 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-<edge id="3" source="1" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor5.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor5.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/neighbor5.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-<edge id="3" source="1" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes2.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes2.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes2.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,27 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<key id="label" for="node" attr.name="label" attr.type="string"/>
-
-<graph edgedefault="directed">
-<node id="0">
-<data key="label">A</data>
-</node>
-<node id="1">
-<data key="label">B</data>
-</node>
-<node id="2">
-<data key="label">C</data>
-</node>
-<node id="3">
-<data key="label">F</data>
-</node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes3.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes3.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes3.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,27 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<key id="label" for="node" attr.name="label" attr.type="string"/>
-
-<graph edgedefault="directed">
-<node id="0">
-<data key="label">A</data>
-</node>
-<node id="1">
-<data key="label">B</data>
-</node>
-<node id="2">
-<data key="label">C</data>
-</node>
-<node id="3">
-<data key="label">D</data>
-</node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes4.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes4.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodeattributes4.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,27 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<key id="label" for="node" attr.name="label" attr.type="string"/>
-
-<graph edgedefault="directed">
-<node id="0">
-<data key="label">A</data>
-</node>
-<node id="1">
-<data key="label">B</data>
-</node>
-<node id="2">
-<data key="label">D</data>
-</node>
-<node id="3">
-<data key="label">C</data>
-</node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="1" target="0"></edge>
-<edge id="3" source="3" target="2"></edge>
-</graph>
-</graphml>
Deleted: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodecount2.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodecount2.xml 2007-09-12 04:36:19 UTC (rev 516)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/nodecount2.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
- http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-
-<graph edgedefault="undirected">
-<node id="0"></node>
-<node id="1"></node>
-<node id="2"></node>
-<node id="3"></node>
-<edge id="0" source="0" target="1"></edge>
-<edge id="1" source="0" target="3"></edge>
-<edge id="2" source="2" target="3"></edge>
-</graph>
-</graphml>
Added: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webattrexample.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webattrexample.xml (rev 0)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webattrexample.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -0,0 +1,41 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
+ http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
+ <key id="d0" for="node" attr.name="color" attr.type="string">
+ <default>yellow</default>
+ </key>
+ <key id="d1" for="edge" attr.name="weight" attr.type="double"/>
+ <graph id="G" edgedefault="undirected">
+ <node id="n0">
+ <data key="d0">green</data>
+ </node>
+ <node id="n1"/>
+ <node id="n2">
+ <data key="d0">blue</data>
+ </node>
+ <node id="n3">
+ <data key="d0">red</data>
+ </node>
+ <node id="n4"/>
+ <node id="n5">
+ <data key="d0">turquoise</data>
+ </node>
+ <edge id="e0" source="n0" target="n2">
+ <data key="d1">1.0</data>
+ </edge>
+ <edge id="e1" source="n0" target="n1">
+ <data key="d1">1.0</data>
+ </edge>
+ <edge id="e2" source="n1" target="n3">
+ <data key="d1">2.0</data>
+ </edge>
+ <edge id="e3" source="n3" target="n2"/>
+ <edge id="e4" source="n2" target="n4"/>
+ <edge id="e5" source="n3" target="n5"/>
+ <edge id="e6" source="n5" target="n4">
+ <data key="d1">1.1</data>
+ </edge>
+ </graph>
+</graphml>
\ No newline at end of file
Added: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webparseinfoattr.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webparseinfoattr.xml (rev 0)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/webparseinfoattr.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -0,0 +1,36 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!-- This file was written by the JAVA GraphML Library.-->
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
+ http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
+ <graph id="G" edgedefault="directed"
+ parse.nodes="11" parse.edges="12"
+ parse.maxindegree="2" parse.maxoutdegree="3"
+ parse.nodeids="canonical" parse.edgeids="free"
+ parse.order="nodesfirst">
+ <node id="n0" parse.indegree="0" parse.outdegree="1"/>
+ <node id="n1" parse.indegree="0" parse.outdegree="1"/>
+ <node id="n2" parse.indegree="2" parse.outdegree="1"/>
+ <node id="n3" parse.indegree="1" parse.outdegree="2"/>
+ <node id="n4" parse.indegree="1" parse.outdegree="1"/>
+ <node id="n5" parse.indegree="2" parse.outdegree="1"/>
+ <node id="n6" parse.indegree="1" parse.outdegree="2"/>
+ <node id="n7" parse.indegree="2" parse.outdegree="0"/>
+ <node id="n8" parse.indegree="1" parse.outdegree="3"/>
+ <node id="n9" parse.indegree="1" parse.outdegree="0"/>
+ <node id="n10" parse.indegree="1" parse.outdegree="0"/>
+ <edge id="edge0001" source="n0" target="n2"/>
+ <edge id="edge0002" source="n1" target="n2"/>
+ <edge id="edge0003" source="n2" target="n3"/>
+ <edge id="edge0004" source="n3" target="n5"/>
+ <edge id="edge0005" source="n3" target="n4"/>
+ <edge id="edge0006" source="n4" target="n6"/>
+ <edge id="edge0007" source="n6" target="n5"/>
+ <edge id="edge0008" source="n5" target="n7"/>
+ <edge id="edge0009" source="n6" target="n8"/>
+ <edge id="edge0010" source="n8" target="n7"/>
+ <edge id="edge0011" source="n8" target="n9"/>
+ <edge id="edge0012" source="n8" target="n10"/>
+ </graph>
+</graphml>
\ No newline at end of file
Added: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/wikipedia.xml
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/wikipedia.xml (rev 0)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/GraphML Files/wikipedia.xml 2007-09-12 18:00:09 UTC (rev 517)
@@ -0,0 +1,11 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns15"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance16"
+ xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns17
+ http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd18">
+ <graph id="G" edgedefault="undirected">
+ <node id="n0"/>
+ <node id="n1"/>
+ <edge source="n0" target="n1"/>
+ </graph>
+</graphml>
\ No newline at end of file
Added: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/FlyMINT.nwb
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/FlyMINT.nwb (rev 0)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/FlyMINT.nwb 2007-09-12 18:00:09 UTC (rev 517)
@@ -0,0 +1,630 @@
+#Converted by Cesifoti for the NWB... :-)
+*Nodes 330
+id*int label*string
+1 "ACTB"
+2 "AKAP1"
+3 "ATPsyn-beta"
+4 "Act57B"
+5 "BEAF-32"
+6 "BEST:CK01296"
+7 "BG4"
+8 "BG:DS00180.8"
+9 "BM-40-SPARC"
+10 "C901"
+11 "CDC2"
+12 "CDC28"
+13 "CDK3"
+14 "CDK4"
+15 "CG10014"
+16 "CG10017"
+17 "CG10019"
+18 "CG10032"
+19 "CG10039"
+20 "CG10051"
+21 "CG10053"
+22 "CG10055"
+23 "CG10068"
+24 "CG10166"
+25 "CG10200"
+26 "CG10263"
+27 "CG11097"
+28 "CG11327"
+29 "CG11345"
+30 "CG11489"
+31 "CG11635"
+32 "CG11656"
+33 "CG11699"
+34 "CG11722"
+35 "CG11876"
+36 "CG11881"
+37 "CG11899"
+38 "CG12065"
+39 "CG12203"
+40 "CG12679"
+41 "CG12932"
+42 "CG13142"
+43 "CG13159"
+44 "CG13320"
+45 "CG13512"
+46 "CG13588"
+47 "CG13627"
+48 "CG13840"
+49 "CG13903"
+50 "CG14079"
+51 "CG14204"
+52 "CG14354"
+53 "CG14546"
+54 "CG14578"
+55 "CG14718"
+56 "CG15032"
+57 "CG15080"
+58 "CG15136"
+59 "CG15436"
+60 "CG15489"
+61 "CG15529"
+62 "CG15631"
+63 "CG15772"
+64 "CG15783"
+65 "CG15816"
+66 "CG16728"
+67 "CG17019"
+68 "CG17050"
+69 "CG17666"
+70 "CG17819"
+71 "CG1792"
+72 "CG1850"
+73 "CG18659"
+74 "CG2233"
+75 "CG2767"
+76 "CG3062"
+77 "CG3075"
+78 "CG3081"
+79 "CG31054"
+80 "CG31122"
+81 "CG31160"
+82 "CG31245"
+83 "CG31826"
+84 "CG32226"
+85 "CG32542"
+86 "CG32677"
+87 "CG3270"
+88 "CG33017"
+89 "CG3800"
+90 "CG3918"
+91 "CG41099"
+92 "CG4404"
+93 "CG4461"
+94 "CG4617"
+95 "CG4818"
+96 "CG4829"
+97 "CG4959"
+98 "CG5023"
+99 "CG5140"
+100 "CG5494"
+101 "CG5804"
+102 "CG6049"
+103 "CG6416"
+104 "CG6459"
+105 "CG6607"
+106 "CG6608"
+107 "CG6707"
+108 "CG6770"
+109 "CG6945"
+110 "CG7081"
+111 "CG7101"
+112 "CG7683"
+113 "CG8010"
+114 "CG8173"
+115 "CG8854"
+116 "CG8942"
+117 "CG9205"
+118 "CG9288"
+119 "CG9467"
+120 "CG9520"
+121 "CG9572"
+122 "CG9663"
+123 "CG9757"
+124 "CG9778"
+125 "CG9784"
+126 "CG9917"
+127 "CTBP1"
+128 "Caf1"
+129 "Cam"
+130 "Ccn"
+131 "Cdk7"
+132 "CkII-alpha"
+133 "CkII-alpha-i1"
+134 "CkII-beta"
+135 "Cks30A"
+136 "Clp"
+137 "CtBP"
+138 "CycD"
+139 "CycE"
+140 "CycJ"
+141 "DIP1"
+142 "DNApol-alpha-180"
+143 "DNApol-alpha-73"
+144 "Ddc"
+145 "Dmel_CG10035"
+146 "Dok1"
+147 "Dpit47"
+148 "Dredd"
+149 "Dref"
+150 "E(spl)"
+151 "E(z)"
+152 "EG:BACH7M4.4"
+153 "EG:BACR42I17.8"
+154 "Fak56D"
+155 "Fcp3C"
+156 "G-i-alpha-65A"
+157 "GTF2B"
+158 "Graf"
+159 "Grasp65"
+160 "GstD1"
+161 "HLH4C"
+162 "HLHm5"
+163 "HLHm7"
+164 "Hsf"
+165 "Hsp67Ba"
+166 "IM2"
+167 "Iswi"
+168 "Jun"
+169 "MAGE"
+170 "MBD-R2"
+171 "MED19"
+172 "MPP5"
+173 "MTA1-like"
+174 "Mbs"
+175 "Mer"
+176 "Mst84Da"
+177 "Mst84Dc"
+178 "Myd88"
+179 "Mylk2"
+180 "N"
+181 "NPC1b"
+182 "NUCB1"
+183 "Nak"
+184 "Nep1"
+185 "Nipsnap"
+186 "Noa36"
+187 "Nrt"
+188 "Oli"
+189 "PGR"
+190 "PPP1CC"
+191 "PRK1"
+192 "Pak"
+193 "Pen"
+194 "Pif1B"
+195 "Pk17E"
+196 "Pka-R2"
+197 "Pkc98E"
+198 "Poxm"
+199 "Pp1-alpha-96A"
+200 "Pros26.4"
+201 "Q8ML63"
+202 "Q9NKB3"
+203 "Q9VXK4"
+204 "RAC1"
+205 "Rack1"
+206 "RpL17"
+207 "RpL24"
+208 "RpL5"
+209 "RpLP0"
+210 "RpS15"
+211 "RpS15Aa"
+212 "RpS3"
+213 "RpS8"
+214 "SPT15"
+215 "Scm"
+216 "Sec61-beta"
+217 "Sirt4"
+218 "Sox21b"
+219 "Sra-1"
+220 "SytIV"
+221 "Taf1"
+222 "Taf12"
+223 "Taf4"
+224 "Taf6"
+225 "Tango9"
+226 "Tektin-A"
+227 "Tequila"
+228 "TfIIB"
+229 "Traf2"
+230 "Trf"
+231 "Trf2"
+232 "Trl"
+233 "Ubc84D"
+234 "Ubx"
+235 "VP16"
+236 "WWOX"
+237 "X11L"
+238 "YL-1"
+239 "aPKC"
+240 "alpha-Tub84B"
+241 "arm"
+242 "baz"
+243 "bif"
+244 "bowl"
+245 "brk"
+246 "bsh"
+247 "cdc2"
+248 "cdc2c"
+249 "cm"
+250 "corto"
+251 "crb"
+252 "dap"
+253 "dlt"
+254 "drm"
+255 "e(y)1"
+256 "eIF2B-beta"
+257 "elfless"
+258 "emc"
+259 "esc"
+260 "exd"
+261 "exu"
+262 "fkh"
+263 "fng"
+264 "for"
+265 "fs(1)Ya"
+266 "ftz"
+267 "ftz-f1"
+268 "fws"
+269 "fz2"
+270 "gro"
+271 "h"
+272 "hbn"
+273 "inaD"
+274 "insc"
+275 "kirre"
+276 "l(1)G0004"
+277 "l(2)37Cc"
+278 "l(3)IX-14"
+279 "l(3)s2214"
+280 "lark"
+281 "lin"
+282 "lola"
+283 "mira"
+284 "mod"
+285 "mod(mdg4)"
+286 "mus205"
+287 "nej"
+288 "norpA"
+289 "num-1"
+290 "numb"
+291 "odd"
+292 "opa"
+293 "otp"
+294 "par-6"
+295 "ph-p"
+296 "phr"
+297 "pll"
+298 "plu"
+299 "png"
+300 "prod"
+301 "pros"
+302 "protein_alias_1"
+303 "protein_alias_2"
+304 "raps"
+305 "rl"
+306 "rst"
+307 "rtGEF"
+308 "sala"
+309 "sc"
+310 "sca"
+311 "scu"
+312 "sdt"
+313 "slou"
+314 "sns"
+315 "sol"
+316 "ssh"
+317 "sta"
+318 "star1"
+319 "stau"
+320 "term"
+321 "tinc"
+322 "tj"
+323 "tos"
+324 "tral"
+325 "tub"
+326 "vir-1"
+327 "vvl"
+328 "wek"
+329 "yps"
+330 "zfh1"
+*UndirectedEdges
+source*int target*int
+97 262
+48 18
+322 134
+198 15
+27 23
+54 18
+319 274
+69 322
+219 204
+254 111
+8 322
+307 276
+7 148
+324 18
+150 132
+30 18
+43 18
+82 307
+60 18
+201 194
+272 18
+140 135
+313 18
+23 106
+235 228
+231 128
+307 174
+300 258
+219 1
+243 199
+98 4
+83 307
+40 186
+299 298
+223 189
+90 322
+234 168
+322 108
+323 18
+15 129
+262 121
+322 101
+202 18
+322 103
+262 134
+55 160
+244 181
+248 135
+44 19
+31 22
+307 246
+45 18
+50 18
+52 21
+57 327
+285 225
+319 283
+264 212
+81 18
+292 186
+74 322
+251 172
+2 196
+264 205
+63 154
+35 307
+193 154
+252 248
+240 18
+18 136
+79 262
+78 18
+160 102
+58 169
+322 207
+265 209
+21 195
+213 18
+322 116
+307 268
+322 115
+297 229
+4 318
+301 283
+329 261
+322 211
+322 210
+184 18
+138 12
+322 216
+4 314
+307 29
+208 18
+68 307
+206 18
+18 107
+18 100
+264 126
+38 264
+92 18
+42 169
+322 3
+307 153
+307 152
+279 113
+71 186
+217 18
+322 24
+230 164
+258 161
+242 239
+66 307
+140 12
+85 18
+87 307
+170 118
+31 186
+325 297
+51 18
+28 156
+221 214
+316 262
+295 250
+4 222
+162 132
+6 18
+225 141
+187 18
+322 163
+262 177
+18 112
+262 176
+307 105
+264 114
+18 119
+220 117
+91 262
+135 12
+135 13
+135 11
+294 242
+327 10
+283 274
+219 134
+53 186
+96 18
+37 262
+304 274
+303 302
+267 266
+255 228
+330 127
+4 236
+99 307
+252 13
+289 197
+281 244
+250 151
+33 264
+255 235
+307 233
+244 241
+69 145
+70 160
+18 166
+21 161
+307 158
+171 156
+186 124
+243 190
+5 279
+26 18
+179 129
+89 322
+231 167
+77 4
+248 138
+279 137
+64 18
+307 185
+28 15
+322 257
+9 327
+160 125
+309 258
+271 270
+86 306
+320 18
+296 225
+322 269
+147 142
+49 322
+306 237
+308 160
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Added: trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TF_DNA_regulonDB.nwb
===================================================================
--- trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TF_DNA_regulonDB.nwb (rev 0)
+++ trunk/testing/org.cishell.testing.convertertester.core.new/src/org/cishell/testing/convertertester/core/test_files/NWB Files/TF_DNA_regulonDB.nwb 2007-09-12 18:00:09 UTC (rev 517)
@@ -0,0 +1,4074 @@
+#Converted by Cesifoti for the NWB... :-)
+*Nodes 1333
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+2 "aceB"
+3 "aceE"
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[truncated message content] |
