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[CIShell-SVN] SF.net SVN: cishell: [593] trunk/core/org.cishell.docs/src
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From: <bh...@us...> - 2008-01-09 00:57:22
|
Revision: 593
http://cishell.svn.sourceforge.net/cishell/?rev=593&view=rev
Author: bh2
Date: 2008-01-08 16:57:19 -0800 (Tue, 08 Jan 2008)
Log Message:
-----------
Some initial work on the cishell specification, mainly in the Introduction, Framework, and Algorithm sections.
Modified Paths:
--------------
trunk/core/org.cishell.docs/src/specification/tex/algorithms.tex
trunk/core/org.cishell.docs/src/specification/tex/data.tex
trunk/core/org.cishell.docs/src/specification/tex/dataconversionservice.tex
trunk/core/org.cishell.docs/src/specification/tex/datamanagerservice.tex
trunk/core/org.cishell.docs/src/specification/tex/framework.tex
trunk/core/org.cishell.docs/src/specification/tex/guibuilderservice.tex
trunk/core/org.cishell.docs/src/specification/tex/guidefinition.tex
trunk/core/org.cishell.docs/src/specification/tex/introduction.tex
Added Paths:
-----------
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trunk/core/org.cishell.docs/src/img/algExecWorkflow.pdf
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Added: trunk/core/org.cishell.docs/src/img/cishellInteraction.pdf
===================================================================
(Binary files differ)
Property changes on: trunk/core/org.cishell.docs/src/img/cishellInteraction.pdf
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Modified: trunk/core/org.cishell.docs/src/specification/tex/algorithms.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/algorithms.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/algorithms.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,13 +1,35 @@
-\section{Algorithm Definition}
+\section{Algorithm Specification}
+
+\subsection*{\textit{Version 1.0}}
+
\subsection{Introduction}
+The CIShell Platform has been specifically designed around the idea of the
+algorithm. It is the central and most important concept. Algorithms are fully
+defined and self-contained bits of execution. They can do many things from data
+conversion, data analysis, and can even spawn whole outside programs if needs be.
+Algorithms are very well defined black boxes in that what can come into and out
+of the algorithm is specified in each algorithm's metadata. Other than that,
+CIShell makes no attempt to understand the algorithm.
+
+Figure \ref{fig:algExecWorkflow} shows the flow of information into and out of an
+algorithm. Here an algorithm is passed zero or more pieces of data, any
+user-entered parameters, and a CIShell context. The algorithm is then executed
+and produces zero or more pieces of data.
+
\begin{figure}[htb!]
\centering
-\includegraphics[width=90mm]{../img/algorithmDefn.pdf}
-\caption{Algorithm Definition}
-\label{fig:algorithmDefn}
+\includegraphics[width=150mm]{../img/algExecWorkflow.pdf}
+\caption{Algorithm Execution Workflow}
+\label{fig:algExecWorkflow}
\end{figure}
+An algorithm defines its inputs in two ways. First, the input Data is defined
+in the algorithm's service metadata. Second, the acceptable user-entered
+parameters are defined in a MetaTypeProvider. This MetaTypeProvider defines the
+types, value range, and textual description of the parameters needed. From this
+information, a user interface (UI) can be created that asks a user for the
+data.
\subsection{Standard Algorithm Properties}
\orgcishellframeworkalgorithm{}
Modified: trunk/core/org.cishell.docs/src/specification/tex/data.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/data.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/data.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,4 +1,5 @@
-\section{Data Definition}
+\section{Data Specification}
+\subsection*{\textit{Version 1.0}}
\subsection{Introduction}
\subsection{Standard Data Properties}
\orgcishellframeworkdata{}
Modified: trunk/core/org.cishell.docs/src/specification/tex/dataconversionservice.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/dataconversionservice.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/dataconversionservice.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,4 +1,5 @@
\chapter{Data Conversion Service Specification}
+\section*{\textit{Version 1.0}}
\section{Introduction}
\section{Data Conversion Service}
\orgcishellserviceconversion{}
Modified: trunk/core/org.cishell.docs/src/specification/tex/datamanagerservice.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/datamanagerservice.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/datamanagerservice.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,4 +1,5 @@
\chapter{Data Manager Application Service Specification}
+\section*{\textit{Version 1.0}}
\section{Introduction}
\section{Data Manager Service}
\orgcishellappservicedatamanager{}
\ No newline at end of file
Modified: trunk/core/org.cishell.docs/src/specification/tex/framework.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/framework.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/framework.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,5 +1,65 @@
\chapter{Framework API}
+
+\section*{\textit{Version 1.0}}
+
\section{Introduction}
+
+The org.cishell.framework package and subpackages define the core of CIShell. The
+key components being algorithms, data, and CIShell service access.
+
\subsection{Essentials}
+
+\begin{itemize}
+ \item \textit{Application Independence} - Algorithms must be usable in a wide
+ variety of contexts and should not be tied to any one front end where
+ possible.
+ \item \textit{Delayed Execution} - There may be a large delay between an
+ algorithm getting parameters for execution and its actual execution.
+ \item \textit{Remote Execution} - Algorithm interfaces should be designed to
+ facilitate remote execution of algorithms where possible.
+\end{itemize}
+
\subsection{Entities}
-\subsection{Operations}
\ No newline at end of file
+
+\begin{itemize}
+ \item \textit{AlgorithmFactory} - The service interface for algorithms.
+ A factory class which creates an Algorithm for execution from input data.
+ \item \textit{Algorithm} - The interface for the code execution part of the
+ algorithm.
+ \item \textit{AlgorithmProperty} - The interface which provides string
+ constants for an algorithm's service metadata.
+ \item \textit{DataValidator} - The interface an AlgorithmFactory extends to
+ provide additional data validation in addition to the data format validation
+ that an application should provide ahead of time.
+ \item \textit{ProgressTrackable} - The interface an Algorithm extends to allow
+ for more detailed monitoring and control of an Algorithm's progress while
+ executing.
+ \item \textit{ProgressMonitor} - The interface for a class to be passed in to
+ a ProgressTrackable Algorithm so that the Algorithm can be controlled
+ and provide information on its progress while executing.
+ \item \textit{Data} - The interface used to pass data (other than
+ parameters) and meta-data between algorithms.
+ \item \textit{BasicData} - A simple implementation of the Data interface.
+ \item \textit{DataProperty} - The interface which provides string constants
+ for Data's metadata.
+ \item \textit{CIShellContext} - The interface for a class to be passed in to
+ an AlgorithmFactory for us in gaining access to standard CIShell services.
+ \item \textit{LocalCIShellContext} - A simple implementation of the
+ CIShellContext interface which pulls CIShell services from the OSGi Service
+ Registry.
+\end{itemize}
+
+\begin{figure}[htb!]
+\centering
+\includegraphics[width=150mm]{../img/cishellInteraction.pdf}
+\caption{org.cishell.framework Class Diagram}
+\label{fig:cishellInteraction}
+\end{figure}
+
+\subsection{Operations}
+
+The algorithm developer should fully implement the AlgorithmFactory interface and
+make it available in OSGi's Service Registry. The system developer will provide
+the services required by CIShell in OSGi's Service Registry. Application
+developers will provide everything else, orchestrating the passing of information
+between algorithms.
Modified: trunk/core/org.cishell.docs/src/specification/tex/guibuilderservice.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/guibuilderservice.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/guibuilderservice.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,4 +1,5 @@
\chapter{GUI Builder Service Specification}
+\section*{\textit{Version 1.0}}
\section{Introduction}
\section{GUI Definition}
\section{GUI Builder Service}
Modified: trunk/core/org.cishell.docs/src/specification/tex/guidefinition.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/guidefinition.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/guidefinition.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,4 +1,5 @@
-\section{GUI Definition}
+\section{GUI Specification}
+\subsection*{\textit{Version 1.0}}
\subsection{Introduction}
\subsection{org.osgi.service.metatype}
\subsection{MetaType Extensions}
Modified: trunk/core/org.cishell.docs/src/specification/tex/introduction.tex
===================================================================
--- trunk/core/org.cishell.docs/src/specification/tex/introduction.tex 2008-01-02 20:40:30 UTC (rev 592)
+++ trunk/core/org.cishell.docs/src/specification/tex/introduction.tex 2008-01-09 00:57:19 UTC (rev 593)
@@ -1,5 +1,54 @@
\chapter{Introduction}
-\section{CIShell Overview}
+
+The Cyberinfrastructure Shell (CIShell) is an open source, community-driven
+platform for the integration and utilization of datasets, algorithms, tools, and
+computing resources. It is built specifically to enable (1) algorithm developers
+to write and disseminate their algorithms in their favorite programming language
+while retaining their intellectual rights after distribution; (2) data holders to
+easily disseminate their data for use by others; (3) application developers to
+design applications from custom sets of algorithms and datasets that interoperate
+seamlessly; and finally (4) researchers, educators, and practitioners to use
+existing datasets and algorithms to further science.
+
+\section{CIShell Platform Overview}
+
+The CIShell Platform consists of Java interface definitions of algorithms, data,
+services for algorithm developers, and services for application developers. Much
+of the platform uses metadata and is fully defined.
+
\section{What is New}
+
+This is the first release of the CIShell Platform Specification. Future
+versions will strive for backwards compatibility.
+
\section{Reader Level}
-\section{Conventions and Terms}
\ No newline at end of file
+
+This specification is written for the following audiences:
+\begin{itemize}
+ \item Java Algorithm developers
+ \item Non-Java Algorithm developers
+ \item Framework and system service developers (system developers)
+ \item Application developers building on CIShell
+\end{itemize}
+
+The CIShell Specifications assume that the reader has at least one year of
+practical experience in writing Java programs. CIShell is built to run on the
+OSGi Service Platform Release 4 and thus a working knowledge of OSGi is expected.
+OSGi (and thus CIShell) is highly dynamic and must be taken into consideration
+when developing anything on CIShell.
+
+Non-Java Algorithm developers may not need to know any Java and should be mainly
+concerned with the metadata definitions for Algorithms and Data. They may also
+need to be aware of OSGi and the other services CIShell provides, but more than
+likely will not directly interact with them.
+
+\section{Conventions and Terms}
+
+The conventions and terms are exactly the same as from OSGi's Core
+Specification, section 1.4.
+
+\section{Version Information}
+
+This is the first release of the CIShell Platform Specification. All packages are
+at 1.0 for this release. Subsequent releases may increase the version number of
+specific packages, if changes have been made.
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