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cishell-svn
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From: <bh...@us...> - 2006-12-20 19:31:35
|
Revision: 356
http://svn.sourceforge.net/cishell/?rev=356&view=rev
Author: bh2
Date: 2006-12-20 11:31:24 -0800 (Wed, 20 Dec 2006)
Log Message:
-----------
updated the conversion graph sampledata and added netscie sampledata to the cishell reference installation
Modified Paths:
--------------
trunk/deployment/cishell-installer/sampledata/Network/conversionGraph.graphml.xml
Added Paths:
-----------
trunk/deployment/cishell-installer/sampledata/Network/netsci06-conference.net
Modified: trunk/deployment/cishell-installer/sampledata/Network/conversionGraph.graphml.xml
===================================================================
--- trunk/deployment/cishell-installer/sampledata/Network/conversionGraph.graphml.xml 2006-12-20 19:17:15 UTC (rev 355)
+++ trunk/deployment/cishell-installer/sampledata/Network/conversionGraph.graphml.xml 2006-12-20 19:31:24 UTC (rev 356)
@@ -5,20 +5,21 @@
<node id="1" label="edu.berkeley.guir.prefuse.graph.Graph" />
<node id="2" label="prefuse.data.Graph" />
<node id="3" label="file:text/graphml+xml" />
-<node id="4" label="file:application/pajek" />
+<node id="4" label="edu.uci.ics.jung.graph.Graph" />
<node id="5" label="file:text/xgmml+xml" />
-<node id="6" label="edu.uci.ics.jung.graph.Graph" />
+<node id="6" label="file:application/pajek" />
<node id="7" label="file:text/nwb" />
+<edge source="4" target="1" directed="true"/>
<edge source="1" target="5" directed="true"/>
+<edge source="3" target="4" directed="true"/>
<edge source="3" target="7" directed="true"/>
<edge source="4" target="6" directed="true"/>
-<edge source="6" target="1" directed="true"/>
-<edge source="2" target="3" directed="true"/>
+<edge source="4" target="3" directed="true"/>
+<edge source="1" target="4" directed="true"/>
+<edge source="2" target="4" directed="true"/>
+<edge source="5" target="1" directed="true"/>
+<edge source="4" target="2" directed="true"/>
<edge source="6" target="4" directed="true"/>
-<edge source="5" target="1" directed="true"/>
-<edge source="6" target="3" directed="true"/>
<edge source="7" target="3" directed="true"/>
-<edge source="3" target="6" directed="true"/>
-<edge source="3" target="2" directed="true"/>
</graph>
</graphml>
Added: trunk/deployment/cishell-installer/sampledata/Network/netsci06-conference.net
===================================================================
--- trunk/deployment/cishell-installer/sampledata/Network/netsci06-conference.net (rev 0)
+++ trunk/deployment/cishell-installer/sampledata/Network/netsci06-conference.net 2006-12-20 19:31:24 UTC (rev 356)
@@ -0,0 +1,662 @@
+*Vertices 168
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+ 2 "Prof. Manju Ahuja" 0.4509 0.3030 0.5000 sh ellipse ic Black bc White bw .2 lc Gray70 x_fact 1.0 y_fact 1.0
+ 3 "Prof. Craig M Allen" 0.5500 0.3304 0.5000
+ 4 "Mr. Nicholas Altieri" 0.1000 0.4382 0.5000
+ 5 "Prof. Dimitris G Assimakopoulos" 0.7000 0.3481 0.5000
+ 6 "Sricharan Ayyalasomayajula" 0.5484 0.6814 0.5000
+ 7 "Ms. Duygu Balcan" 0.3500 0.2686 0.5000 sh ellipse ic Green bc White bw .2 lc Gray70 x_fact 1.0 y_fact 1.0
+ 8 "Dr. Ariel Balter" 0.3497 0.3698 0.5000 sh ellipse ic Black bc White bw .2 lc Gray70 x_fact 1.0 y_fact 1.0
+ 9 "Prof. David C Bangert" 0.4500 0.4231 0.5000
+ 10 "Prof. Albert-Laszlo Barabasi" 0.9000 0.6369 0.5000 sh ellipse ic Blue bc White bw .2 lc Gray70 x_fact 3.0 y_fact 3.0
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+ 12 "Dr. Alain Barrat" 0.3500 0.1802 0.5000
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+ 165 "Information Technology (47)" 0.2000 0.1000 0.5000 sh diamond ic Red bc White x_fact 5.51923076923 y_fact 5.51923076923
+ 166 "Ecology (9)" 0.2000 0.7806 0.5000 sh diamond ic Red bc White x_fact 1.86538461538 y_fact 1.86538461538
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+ 168 "Operations Research (9)" 0.2000 0.8141 0.5000 sh diamond ic Red bc White x_fact 1.86538461538 y_fact 1.86538461538
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[truncated message content] |
|
From: <fu...@us...> - 2007-01-22 22:23:16
|
Revision: 364
http://svn.sourceforge.net/cishell/?rev=364&view=rev
Author: fugu13
Date: 2007-01-22 14:23:02 -0800 (Mon, 22 Jan 2007)
Log Message:
-----------
Real graphml files, made by loading xgmml, then converting saving out
using the prefuse graphml writer. Some artifacts, likely due to
converting through Jung, but its legal graphml and has all the
desired attributes.
Modified Paths:
--------------
trunk/deployment/cishell-installer/sampledata/Network/friendster.graphml.xml
trunk/deployment/cishell-installer/sampledata/Network/terror.graphml.xml
Modified: trunk/deployment/cishell-installer/sampledata/Network/friendster.graphml.xml
===================================================================
--- trunk/deployment/cishell-installer/sampledata/Network/friendster.graphml.xml 2006-12-21 22:23:48 UTC (rev 363)
+++ trunk/deployment/cishell-installer/sampledata/Network/friendster.graphml.xml 2007-01-22 22:23:02 UTC (rev 364)
@@ -1,331 +1,1178 @@
<?xml version="1.0" encoding="UTF-8"?>
-<graphml xmlns="http://graphml.graphdrawing.org/xmlns/graphml"
-xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns/graphml">
-<graph edgedefault="undirected">
-<!-- me -->
-<node id="1" label="Jeff"></node>
-<!-- my friends -->
-<node id="2" label="Ed"></node>
-<node id="3" label="Christiaan"></node>
-<node id="4" label="Emily"></node>
-<node id="5" label="Adam"></node>
-<node id="6" label="Cynthia"></node>
-<node id="7" label="Joylette"></node>
-<node id="8" label="Amanda"></node>
-<node id="9" label="Nathaniel"></node>
-<node id="10" label="Bryan"></node>
-<node id="11" label="Tamara"></node>
-<node id="12" label="Ashley"></node>
-<node id="13" label="Ryan"></node>
-<node id="14" label="Alan"></node>
-<node id="15" label="Chris"></node>
-<node id="16" label="Holly"></node>
-<node id="17" label="Patrick"></node><!-- baudisch -->
-<node id="18" label="Fernando"></node>
-<node id="19" label="Corey"></node>
-<node id="20" label="Ben"></node>
-<node id="21" label="Non"></node>
-<!-- friends of friends -->
-<node id="22" label="John"></node>
-<node id="23" label="Calvin"></node>
-<node id="24" label="Stephanie"></node>
-<node id="25" label="John"></node>
-<node id="26" label="Parker"></node>
-<node id="27" label="Patrick"></node><!-- em's friend -->
-<node id="28" label="Marian"></node>
-<node id="29" label="Robert"></node><!-- amanda's friend -->
-<node id="30" label="Patrick"></node><!-- amanda's friend -->
-<node id="31" label="Sam"></node>
-<node id="32" label="Bob"></node>
-<node id="33" label="Katie"></node>
-<node id="34" label="Chako"></node>
-<!-- through alan -->
-<node id="35" label="Diana"></node>
-<node id="36" label="Record Camp"></node>
-<node id="37" label="Chuck"></node>
-<node id="38" label="Micah"></node>
-<node id="39" label="SuperGiggleB"></node>
-<node id="40" label="Dan"></node>
-<node id="41" label="Ida"></node>
-<node id="42" label="Wen-Ting"></node>
-<node id="43" label="Nina"></node>
-<node id="44" label="Rion"></node>
-<node id="45" label="Otomi"></node>
-<node id="46" label="Ed"></node>
-<node id="47" label="Red"></node>
-<!-- through chris -->
-<node id="48" label="Scott"></node>
-<node id="49" label="Andrew"></node>
-<node id="50" label="Emily"></node>
-<node id="51" label="Robin"></node>
-<node id="52" label="Ken"></node>
-<node id="53" label="Michael"></node>
-<node id="54" label="Jon"></node>
-<node id="55" label="Josh"></node>
-<node id="56" label="Matthew"></node>
-<node id="57" label="Casey"></node>
-<node id="58" label="Christopher"></node>
-<node id="59" label="Stephen"></node>
-<node id="60" label="Kenji"></node>
-<node id="61" label="Richard"></node>
-<node id="62" label="Matthew"></node>
-<node id="63" label="David"></node>
-<node id="64" label="Phil"></node>
-<node id="65" label="David"></node>
-<!-- through holly -->
-<node id="66" label="Pete"></node>
-<node id="67" label="Jeremy"></node>
-<!-- through patrick (baudisch) -->
-<node id="68" label="Daniel"></node>
-<node id="69" label="Sumit"></node>
-<!-- through fernando -->
-<node id="70" label="Shane"></node>
-<node id="71" label="Rikard"></node>
-<node id="72" label="David"></node>
-<node id="73" label="Justin"></node>
-<node id="74" label="Shane"></node>
-<node id="75" label="Micaela"></node>
-<node id="76" label="Steven"></node>
-<node id="77" label="Matt"></node>
-<node id="78" label="Jory"></node>
-<node id="79" label="Alexander"></node>
-<node id="80" label="Jason"></node>
-<node id="81" label="JohnAnthony"></node>
-<!-- through ben -->
-<node id="82" label="Dorothy"></node>
-<node id="83" label="Nels"></node>
-<node id="84" label="Rania"></node>
-<node id="85" label="Michael"></node>
-<node id="86" label="Evan"></node>
-<node id="87" label="Joanna"></node>
-<node id="88" label="sistah"></node>
-<node id="89" label="Meredith"></node>
-<node id="90" label="Eric"></node>
-<node id="91" label="John"></node>
-<node id="92" label="ryan"></node>
-<node id="93" label="Eric"></node>
-<node id="94" label="Jay"></node>
-<node id="95" label="rumi"></node>
-<node id="96" label="justin"></node>
-<node id="97" label="Julij"></node>
-<node id="98" label="beverly"></node>
-<node id="99" label="Jai Young"></node>
-<node id="100" label="spot"></node>
-<node id="101" label="Tammy"></node>
-<node id="102" label="Michael"></node>
-<node id="103" label="jennifer"></node>
-<node id="104" label="Brent"></node>
-<node id="105" label="Lanha souris"></node>
-<node id="106" label="dan"></node>
-<node id="107" label="jeremy"></node>
-<node id="108" label="Jim"></node>
-<node id="109" label="steph"></node>
-<node id="110" label="Jane"></node>
-<node id="111" label="Justin"></node>
-<node id="112" label="Kevin"></node>
-<node id="113" label="Matt"></node>
-<node id="114" label="Judith"></node>
-<node id="115" label="Alexander"></node>
-<node id="116" label="Caterina"></node>
-<node id="117" label="Jesse James"></node>
-<node id="118" label="Tom"></node>
-<node id="119" label="Stewart"></node>
-<node id="120" label="Meg"></node>
-<node id="121" label="Matt"></node>
-<node id="122" label="Anil"></node>
-<!-- through non -->
-<node id="123" label="Scott"></node>
-<node id="124" label="Steve"></node>
-<node id="125" label="kris"></node>
-<node id="126" label="Bill"></node>
-<node id="127" label="Xz"></node>
-<node id="128" label="David"></node>
-<node id="129" label="Zephoria"></node>
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
+ http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-<!-- edges -->
-<edge label="" source="1" target="2"></edge>
-<edge label="" source="1" target="3"></edge>
-<edge label="" source="1" target="4"></edge>
-<edge label="" source="1" target="5"></edge>
-<edge label="" source="1" target="6"></edge>
-<edge label="" source="1" target="7"></edge>
-<edge label="" source="1" target="8"></edge>
-<edge label="" source="1" target="9"></edge>
-<edge label="" source="1" target="10"></edge>
-<edge label="" source="1" target="11"></edge>
-<edge label="" source="1" target="12"></edge>
-<edge label="" source="1" target="13"></edge>
-<edge label="" source="1" target="14"></edge>
-<edge label="" source="1" target="15"></edge>
-<edge label="" source="1" target="16"></edge>
-<edge label="" source="1" target="17"></edge>
-<edge label="" source="1" target="18"></edge>
-<edge label="" source="1" target="19"></edge>
-<edge label="" source="1" target="20"></edge>
-<edge label="" source="1" target="21"></edge>
-<!-- ed's friends -->
-<edge label="" source="2" target="5"></edge>
-<edge label="" source="2" target="8"></edge>
-<edge label="" source="2" target="10"></edge>
-<!-- christiaan's friends -->
-<edge label="" source="3" target="5"></edge>
-<edge label="" source="3" target="8"></edge>
-<edge label="" source="3" target="10"></edge>
-<edge label="" source="3" target="17"></edge>
-<!-- emily's friends -->
-<edge label="" source="4" target="22"></edge>
-<edge label="" source="4" target="23"></edge>
-<edge label="" source="4" target="24"></edge>
-<edge label="" source="4" target="25"></edge>
-<edge label="" source="4" target="26"></edge>
-<edge label="" source="4" target="27"></edge>
-<!-- adam's friends -->
-<edge label="" source="5" target="8"></edge>
-<edge label="" source="5" target="10"></edge>
-<!-- cynthia's friends -->
-<edge label="" source="6" target="14"></edge>
-<!-- joylette's friends -->
-<edge label="" source="7" target="8"></edge>
-<edge label="" source="7" target="10"></edge>
-<edge label="" source="7" target="28"></edge>
-<!-- amanda's friends -->
-<edge label="" source="8" target="10"></edge>
-<edge label="" source="8" target="14"></edge>
-<edge label="" source="8" target="15"></edge>
-<edge label="" source="8" target="29"></edge>
-<edge label="" source="8" target="17"></edge>
-<edge label="" source="8" target="18"></edge>
-<edge label="" source="8" target="30"></edge>
-<edge label="" source="8" target="21"></edge>
-<!-- nathaniel's friends -->
-<!-- bryan's friends -->
-<edge label="" source="10" target="31"></edge>
-<edge label="" source="10" target="17"></edge>
-<edge label="" source="10" target="30"></edge>
-<!-- tamara's friends -->
-<edge label="" source="11" target="12"></edge>
-<edge label="" source="11" target="32"></edge>
-<edge label="" source="11" target="33"></edge>
-<!-- ashley's friends -->
-<!-- ryan's friends -->
-<edge label="" source="13" target="34"></edge>
-<edge label="" source="13" target="19"></edge>
-<!-- alan's friends -->
-<edge label="" source="14" target="35"></edge>
-<edge label="" source="14" target="36"></edge>
-<edge label="" source="14" target="37"></edge>
-<edge label="" source="14" target="38"></edge>
-<edge label="" source="14" target="39"></edge>
-<edge label="" source="14" target="40"></edge>
-<edge label="" source="14" target="41"></edge>
-<edge label="" source="14" target="42"></edge>
-<edge label="" source="14" target="43"></edge>
-<edge label="" source="14" target="44"></edge>
-<edge label="" source="14" target="45"></edge>
-<edge label="" source="14" target="46"></edge>
-<edge label="" source="14" target="47"></edge>
-<edge label="" source="14" target="15"></edge>
-<edge label="" source="14" target="18"></edge>
-<edge label="" source="14" target="21"></edge>
-<!-- chris's friends -->
-<edge label="" source="15" target="48"></edge>
-<edge label="" source="15" target="49"></edge>
-<edge label="" source="15" target="50"></edge>
-<edge label="" source="15" target="51"></edge>
-<edge label="" source="15" target="52"></edge>
-<edge label="" source="15" target="53"></edge>
-<edge label="" source="15" target="54"></edge>
-<edge label="" source="15" target="55"></edge>
-<edge label="" source="15" target="56"></edge>
-<edge label="" source="15" target="57"></edge>
-<edge label="" source="15" target="58"></edge>
-<edge label="" source="15" target="59"></edge>
-<edge label="" source="15" target="60"></edge>
-<edge label="" source="15" target="61"></edge>
-<edge label="" source="15" target="62"></edge>
-<edge label="" source="15" target="63"></edge>
-<edge label="" source="15" target="64"></edge>
-<edge label="" source="15" target="65"></edge>
-<edge label="" source="15" target="16"></edge>
-<edge label="" source="15" target="18"></edge>
-<edge label="" source="15" target="21"></edge>
-<!-- holly's friends -->
-<edge label="" source="16" target="66"></edge>
-<edge label="" source="16" target="59"></edge>
-<edge label="" source="16" target="60"></edge>
-<edge label="" source="16" target="67"></edge>
-<!-- patrick's friends -->
-<edge label="" source="17" target="68"></edge>
-<edge label="" source="17" target="69"></edge>
-<!-- fernando's friends -->
-<edge label="" source="18" target="70"></edge>
-<edge label="" source="18" target="71"></edge>
-<edge label="" source="18" target="72"></edge>
-<edge label="" source="18" target="73"></edge>
-<edge label="" source="18" target="74"></edge>
-<edge label="" source="18" target="75"></edge>
-<edge label="" source="18" target="76"></edge>
-<edge label="" source="18" target="77"></edge>
-<edge label="" source="18" target="78"></edge>
-<edge label="" source="18" target="79"></edge>
-<edge label="" source="18" target="80"></edge>
-<edge label="" source="18" target="81"></edge>
-<!-- corey's friends -->
-<edge label="" source="19" target="20"></edge>
-<!-- ben's friends -->
-<edge label="" source="20" target="45"></edge>
-<edge label="" source="20" target="46"></edge>
-<edge label="" source="20" target="82"></edge>
-<edge label="" source="20" target="83"></edge>
-<edge label="" source="20" target="84"></edge>
-<edge label="" source="20" target="85"></edge>
-<edge label="" source="20" target="86"></edge>
-<edge label="" source="20" target="87"></edge>
-<edge label="" source="20" target="88"></edge>
-<edge label="" source="20" target="89"></edge>
-<edge label="" source="20" target="90"></edge>
-<edge label="" source="20" target="91"></edge>
-<edge label="" source="20" target="92"></edge>
-<edge label="" source="20" target="93"></edge>
-<edge label="" source="20" target="94"></edge>
-<edge label="" source="20" target="95"></edge>
-<edge label="" source="20" target="96"></edge>
-<edge label="" source="20" target="97"></edge>
-<edge label="" source="20" target="98"></edge>
-<edge label="" source="20" target="99"></edge>
-<edge label="" source="20" target="100"></edge>
-<edge label="" source="20" target="101"></edge>
-<edge label="" source="20" target="102"></edge>
-<edge label="" source="20" target="103"></edge>
-<edge label="" source="20" target="104"></edge>
-<edge label="" source="20" target="105"></edge>
-<edge label="" source="20" target="106"></edge>
-<edge label="" source="20" target="107"></edge>
-<edge label="" source="20" target="108"></edge>
-<edge label="" source="20" target="109"></edge>
-<edge label="" source="20" target="110"></edge>
-<edge label="" source="20" target="111"></edge>
-<edge label="" source="20" target="112"></edge>
-<edge label="" source="20" target="113"></edge>
-<edge label="" source="20" target="114"></edge>
-<edge label="" source="20" target="115"></edge>
-<edge label="" source="20" target="116"></edge>
-<edge label="" source="20" target="117"></edge>
-<edge label="" source="20" target="118"></edge>
-<edge label="" source="20" target="119"></edge>
-<edge label="" source="20" target="120"></edge>
-<edge label="" source="20" target="121"></edge>
-<edge label="" source="20" target="122"></edge>
-<!-- non's friends -->
-<edge label="" source="21" target="123"></edge>
-<edge label="" source="21" target="124"></edge>
-<edge label="" source="21" target="125"></edge>
-<edge label="" source="21" target="126"></edge>
-<edge label="" source="21" target="127"></edge>
-<edge label="" source="21" target="128"></edge>
-<edge label="" source="21" target="129"></edge>
+ <!-- prefuse GraphML Writer | Mon Jan 22 15:13:33 EST 2007 -->
+ <key id="label" for="node" attr.name="label" attr.type="string"/>
+ <key id="id" for="node" attr.name="id" attr.type="string"/>
+ <key id="label" for="edge" attr.name="label" attr.type="string"/>
+ <key id="id" for="edge" attr.name="id" attr.type="string"/>
-</graph>
+ <graph edgedefault="undirected">
+ <!-- nodes -->
+ <node id="0">
+ <data key="label">Matthew</data>
+ <data key="id">56</data>
+ </node>
+ <node id="1">
+ <data key="label">Robert</data>
+ <data key="id">29</data>
+ </node>
+ <node id="2">
+ <data key="label">Shane</data>
+ <data key="id">74</data>
+ </node>
+ <node id="3">
+ <data key="label">Tamara</data>
+ <data key="id">11</data>
+ </node>
+ <node id="4">
+ <data key="label">Nels</data>
+ <data key="id">83</data>
+ </node>
+ <node id="5">
+ <data key="label">Jim</data>
+ <data key="id">108</data>
+ </node>
+ <node id="6">
+ <data key="label">Patrick</data>
+ <data key="id">17</data>
+ </node>
+ <node id="7">
+ <data key="label">Tammy</data>
+ <data key="id">101</data>
+ </node>
+ <node id="8">
+ <data key="label">Alexander</data>
+ <data key="id">79</data>
+ </node>
+ <node id="9">
+ <data key="label">ryan</data>
+ <data key="id">92</data>
+ </node>
+ <node id="10">
+ <data key="label">David</data>
+ <data key="id">65</data>
+ </node>
+ <node id="11">
+ <data key="label">Alexander</data>
+ <data key="id">115</data>
+ </node>
+ <node id="12">
+ <data key="label">Red</data>
+ <data key="id">47</data>
+ </node>
+ <node id="13">
+ <data key="label">Ed</data>
+ <data key="id">2</data>
+ </node>
+ <node id="14">
+ <data key="label">Ken</data>
+ <data key="id">52</data>
+ </node>
+ <node id="15">
+ <data key="label">Joylette</data>
+ <data key="id">7</data>
+ </node>
+ <node id="16">
+ <data key="label">Christiaan</data>
+ <data key="id">3</data>
+ </node>
+ <node id="17">
+ <data key="label">Steve</data>
+ <data key="id">124</data>
+ </node>
+ <node id="18">
+ <data key="label">Scott</data>
+ <data key="id">123</data>
+ </node>
+ <node id="19">
+ <data key="label">Micah</data>
+ <data key="id">38</data>
+ </node>
+ <node id="20">
+ <data key="label">Stewart</data>
+ <data key="id">119</data>
+ </node>
+ <node id="21">
+ <data key="label">Alan</data>
+ <data key="id">14</data>
+ </node>
+ <node id="22">
+ <data key="label">sistah</data>
+ <data key="id">88</data>
+ </node>
+ <node id="23">
+ <data key="label">Ben</data>
+ <data key="id">20</data>
+ </node>
+ <node id="24">
+ <data key="label">Matthew</data>
+ <data key="id">62</data>
+ </node>
+ <node id="25">
+ <data key="label">Sam</data>
+ <data key="id">31</data>
+ </node>
+ <node id="26">
+ <data key="label">Jeremy</data>
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+ </node>
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+ <data key="label">Judith</data>
+ <data key="id">114</data>
+ </node>
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+ <data key="label">Calvin</data>
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+ </node>
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+ <data key="label">Jory</data>
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+ </node>
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+ <data key="label">John</data>
+ <data key="id">22</data>
+ </node>
+ <node id="31">
+ <data key="label">Rion</data>
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+ </node>
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+ <data key="id">43</data>
+ </node>
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+ <data key="label">Pete</data>
+ <data key="id">66</data>
+ </node>
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+ <data key="label">Michael</data>
+ <data key="id">53</data>
+ </node>
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+ <data key="label">Meredith</data>
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+ </node>
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+ <data key="id">84</data>
+ </node>
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+ <data key="label">Joanna</data>
+ <data key="id">87</data>
+ </node>
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+ <data key="label">Diana</data>
+ <data key="id">35</data>
+ </node>
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+ <data key="label">Cynthia</data>
+ <data key="id">6</data>
+ </node>
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+ <data key="id">128</data>
+ </node>
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+ <data key="label">Bryan</data>
+ <data key="id">10</data>
+ </node>
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+ <data key="label">Amanda</data>
+ <data key="id">8</data>
+ </node>
+ <node id="43">
+ <data key="label">Michael</data>
+ <data key="id">102</data>
+ </node>
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+ <data key="label">Wen-Ting</data>
+ <data key="id">42</data>
+ </node>
+ <node id="45">
+ <data key="label">Sumit</data>
+ <data key="id">69</data>
+ </node>
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+ <data key="label">Stephanie</data>
+ <data key="id">24</data>
+ </node>
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+ <data key="label">Justin</data>
+ <data key="id">111</data>
+ </node>
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+ <data key="id">51</data>
+ </node>
+ <node id="49">
+ <data key="label">Patrick</data>
+ <data key="id">30</data>
+ </node>
+ <node id="50">
+ <data key="label">Parker</data>
+ <data key="id">26</data>
+ </node>
+ <node id="51">
+ <data key="label">Chris</data>
+ <data key="id">15</data>
+ </node>
+ <node id="52">
+ <data key="label">kris</data>
+ <data key="id">125</data>
+ </node>
+ <node id="53">
+ <data key="label">jeremy</data>
+ <data key="id">107</data>
+ </node>
+ <node id="54">
+ <data key="label">Micaela</data>
+ <data key="id">75</data>
+ </node>
+ <node id="55">
+ <data key="label">Matt</data>
+ <data key="id">113</data>
+ </node>
+ <node id="56">
+ <data key="label">Kenji</data>
+ <data key="id">60</data>
+ </node>
+ <node id="57">
+ <data key="label">Ashley</data>
+ <data key="id">12</data>
+ </node>
+ <node id="58">
+ <data key="label">Stephen</data>
+ <data key="id">59</data>
+ </node>
+ <node id="59">
+ <data key="label">Ida</data>
+ <data key="id">41</data>
+ </node>
+ <node id="60">
+ <data key="label">Matt</data>
+ <data key="id">121</data>
+ </node>
+ <node id="61">
+ <data key="label">John</data>
+ <data key="id">25</data>
+ </node>
+ <node id="62">
+ <data key="label">rumi</data>
+ <data key="id">95</data>
+ </node>
+ <node id="63">
+ <data key="label">Ed</data>
+ <data key="id">46</data>
+ </node>
+ <node id="64">
+ <data key="label">JohnAnthony</data>
+ <data key="id">81</data>
+ </node>
+ <node id="65">
+ <data key="label">Matt</data>
+ <data key="id">77</data>
+ </node>
+ <node id="66">
+ <data key="label">David</data>
+ <data key="id">72</data>
+ </node>
+ <node id="67">
+ <data key="label">Record Camp</data>
+ <data key="id">36</data>
+ </node>
+ <node id="68">
+ <data key="label">Otomi</data>
+ <data key="id">45</data>
+ </node>
+ <node id="69">
+ <data key="label">Holly</data>
+ <data key="id">16</data>
+ </node>
+ <node id="70">
+ <data key="label">Chuck</data>
+ <data key="id">37</data>
+ </node>
+ <node id="71">
+ <data key="label">Julij</data>
+ <data key="id">97</data>
+ </node>
+ <node id="72">
+ <data key="label">Josh</data>
+ <data key="id">55</data>
+ </node>
+ <node id="73">
+ <data key="label">Bill</data>
+ <data key="id">126</data>
+ </node>
+ <node id="74">
+ <data key="label">Jay</data>
+ <data key="id">94</data>
+ </node>
+ <node id="75">
+ <data key="label">Kevin</data>
+ <data key="id">112</data>
+ </node>
+ <node id="76">
+ <data key="label">John</data>
+ <data key="id">91</data>
+ </node>
+ <node id="77">
+ <data key="label">Corey</data>
+ <data key="id">19</data>
+ </node>
+ <node id="78">
+ <data key="label">Bob</data>
+ <data key="id">32</data>
+ </node>
+ <node id="79">
+ <data key="label">Non</data>
+ <data key="id">21</data>
+ </node>
+ <node id="80">
+ <data key="label">Shane</data>
+ <data key="id">70</data>
+ </node>
+ <node id="81">
+ <data key="label">Michael</data>
+ <data key="id">85</data>
+ </node>
+ <node id="82">
+ <data key="label">dan</data>
+ <data key="id">106</data>
+ </node>
+ <node id="83">
+ <data key="label">justin</data>
+ <data key="id">96</data>
+ </node>
+ <node id="84">
+ <data key="label">Jesse James</data>
+ <data key="id">117</data>
+ </node>
+ <node id="85">
+ <data key="label">Andrew</data>
+ <data key="id">49</data>
+ </node>
+ <node id="86">
+ <data key="label">Adam</data>
+ <data key="id">5</data>
+ </node>
+ <node id="87">
+ <data key="label">Ryan</data>
+ <data key="id">13</data>
+ </node>
+ <node id="88">
+ <data key="label">Dan</data>
+ <data key="id">40</data>
+ </node>
+ <node id="89">
+ <data key="label">Katie</data>
+ <data key="id">33</data>
+ </node>
+ <node id="90">
+ <data key="label">Richard</data>
+ <data key="id">61</data>
+ </node>
+ <node id="91">
+ <data key="label">Jeff</data>
+ <data key="id">1</data>
+ </node>
+ <node id="92">
+ <data key="label">Emily</data>
+ <data key="id">4</data>
+ </node>
+ <node id="93">
+ <data key="label">Tom</data>
+ <data key="id">118</data>
+ </node>
+ <node id="94">
+ <data key="label">Rikard</data>
+ <data key="id">71</data>
+ </node>
+ <node id="95">
+ <data key="label">Justin</data>
+ <data key="id">73</data>
+ </node>
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+ <data key="label">Dorothy</data>
+ <data key="id">82</data>
+ </node>
+ <node id="97">
+ <data key="label">Xz</data>
+ <data key="id">127</data>
+ </node>
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+ <data key="id">100</data>
+ </node>
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+ <data key="label">Nathaniel</data>
+ <data key="id">9</data>
+ </node>
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+ <data key="label">steph</data>
+ <data key="id">109</data>
+ </node>
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+ <data key="id">105</data>
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+ <data key="id">64</data>
+ </node>
+ <node id="103">
+ <data key="label">Caterina</data>
+ <data key="id">116</data>
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+ <data key="label">Scott</data>
+ <data key="id">48</data>
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+ <data key="label">Meg</data>
+ <data key="id">120</data>
+ </node>
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+ <data key="id">129</data>
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+ <data key="id">110</data>
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+ <data key="id">122</data>
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+ <data key="label">Christopher</data>
+ <data key="id">58</data>
+ </node>
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+ <data key="label">Casey</data>
+ <data key="id">57</data>
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+ <data key="label">Jason</data>
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[truncated message content] |
|
From: <bh...@us...> - 2007-03-02 20:58:44
|
Revision: 375
http://svn.sourceforge.net/cishell/?rev=375&view=rev
Author: bh2
Date: 2007-03-02 12:58:41 -0800 (Fri, 02 Mar 2007)
Log Message:
-----------
updated the example algorithms available for the cishell reference installation
Added Paths:
-----------
trunk/deployment/cishell-installer/sampledata/Network/bio/
trunk/deployment/cishell-installer/sampledata/Network/bio/FlyMINT.nwb
trunk/deployment/cishell-installer/sampledata/Network/bio/TF_DNA_regulonDB.nwb
trunk/deployment/cishell-installer/sampledata/Network/bio/WI5.nwb
trunk/deployment/cishell-installer/sampledata/Network/bio/WormMint.nwb
trunk/deployment/cishell-installer/sampledata/Network/bio/YeastMINT.nwb
trunk/deployment/cishell-installer/sampledata/Network/seiyu.graphml.xml
Added: trunk/deployment/cishell-installer/sampledata/Network/bio/FlyMINT.nwb
===================================================================
--- trunk/deployment/cishell-installer/sampledata/Network/bio/FlyMINT.nwb (rev 0)
+++ trunk/deployment/cishell-installer/sampledata/Network/bio/FlyMINT.nwb 2007-03-02 20:58:41 UTC (rev 375)
@@ -0,0 +1,628 @@
+//Converted by Cesifoti for the NWB... :-)
+*Nodes 330
+1 "ACTB"
+2 "AKAP1"
+3 "ATPsyn-beta"
+4 "Act57B"
+5 "BEAF-32"
+6 "BEST:CK01296"
+7 "BG4"
+8 "BG:DS00180.8"
+9 "BM-40-SPARC"
+10 "C901"
+11 "CDC2"
+12 "CDC28"
+13 "CDK3"
+14 "CDK4"
+15 "CG10014"
+16 "CG10017"
+17 "CG10019"
+18 "CG10032"
+19 "CG10039"
+20 "CG10051"
+21 "CG10053"
+22 "CG10055"
+23 "CG10068"
+24 "CG10166"
+25 "CG10200"
+26 "CG10263"
+27 "CG11097"
+28 "CG11327"
+29 "CG11345"
+30 "CG11489"
+31 "CG11635"
+32 "CG11656"
+33 "CG11699"
+34 "CG11722"
+35 "CG11876"
+36 "CG11881"
+37 "CG11899"
+38 "CG12065"
+39 "CG12203"
+40 "CG12679"
+41 "CG12932"
+42 "CG13142"
+43 "CG13159"
+44 "CG13320"
+45 "CG13512"
+46 "CG13588"
+47 "CG13627"
+48 "CG13840"
+49 "CG13903"
+50 "CG14079"
+51 "CG14204"
+52 "CG14354"
+53 "CG14546"
+54 "CG14578"
+55 "CG14718"
+56 "CG15032"
+57 "CG15080"
+58 "CG15136"
+59 "CG15436"
+60 "CG15489"
+61 "CG15529"
+62 "CG15631"
+63 "CG15772"
+64 "CG15783"
+65 "CG15816"
+66 "CG16728"
+67 "CG17019"
+68 "CG17050"
+69 "CG17666"
+70 "CG17819"
+71 "CG1792"
+72 "CG1850"
+73 "CG18659"
+74 "CG2233"
+75 "CG2767"
+76 "CG3062"
+77 "CG3075"
+78 "CG3081"
+79 "CG31054"
+80 "CG31122"
+81 "CG31160"
+82 "CG31245"
+83 "CG31826"
+84 "CG32226"
+85 "CG32542"
+86 "CG32677"
+87 "CG3270"
+88 "CG33017"
+89 "CG3800"
+90 "CG3918"
+91 "CG41099"
+92 "CG4404"
+93 "CG4461"
+94 "CG4617"
+95 "CG4818"
+96 "CG4829"
+97 "CG4959"
+98 "CG5023"
+99 "CG5140"
+100 "CG5494"
+101 "CG5804"
+102 "CG6049"
+103 "CG6416"
+104 "CG6459"
+105 "CG6607"
+106 "CG6608"
+107 "CG6707"
+108 "CG6770"
+109 "CG6945"
+110 "CG7081"
+111 "CG7101"
+112 "CG7683"
+113 "CG8010"
+114 "CG8173"
+115 "CG8854"
+116 "CG8942"
+117 "CG9205"
+118 "CG9288"
+119 "CG9467"
+120 "CG9520"
+121 "CG9572"
+122 "CG9663"
+123 "CG9757"
+124 "CG9778"
+125 "CG9784"
+126 "CG9917"
+127 "CTBP1"
+128 "Caf1"
+129 "Cam"
+130 "Ccn"
+131 "Cdk7"
+132 "CkII-alpha"
+133 "CkII-alpha-i1"
+134 "CkII-beta"
+135 "Cks30A"
+136 "Clp"
+137 "CtBP"
+138 "CycD"
+139 "CycE"
+140 "CycJ"
+141 "DIP1"
+142 "DNApol-alpha-180"
+143 "DNApol-alpha-73"
+144 "Ddc"
+145 "Dmel_CG10035"
+146 "Dok1"
+147 "Dpit47"
+148 "Dredd"
+149 "Dref"
+150 "E(spl)"
+151 "E(z)"
+152 "EG:BACH7M4.4"
+153 "EG:BACR42I17.8"
+154 "Fak56D"
+155 "Fcp3C"
+156 "G-i-alpha-65A"
+157 "GTF2B"
+158 "Graf"
+159 "Grasp65"
+160 "GstD1"
+161 "HLH4C"
+162 "HLHm5"
+163 "HLHm7"
+164 "Hsf"
+165 "Hsp67Ba"
+166 "IM2"
+167 "Iswi"
+168 "Jun"
+169 "MAGE"
+170 "MBD-R2"
+171 "MED19"
+172 "MPP5"
+173 "MTA1-like"
+174 "Mbs"
+175 "Mer"
+176 "Mst84Da"
+177 "Mst84Dc"
+178 "Myd88"
+179 "Mylk2"
+180 "N"
+181 "NPC1b"
+182 "NUCB1"
+183 "Nak"
+184 "Nep1"
+185 "Nipsnap"
+186 "Noa36"
+187 "Nrt"
+188 "Oli"
+189 "PGR"
+190 "PPP1CC"
+191 "PRK1"
+192 "Pak"
+193 "Pen"
+194 "Pif1B"
+195 "Pk17E"
+196 "Pka-R2"
+197 "Pkc98E"
+198 "Poxm"
+199 "Pp1-alpha-96A"
+200 "Pros26.4"
+201 "Q8ML63"
+202 "Q9NKB3"
+203 "Q9VXK4"
+204 "RAC1"
+205 "Rack1"
+206 "RpL17"
+207 "RpL24"
+208 "RpL5"
+209 "RpLP0"
+210 "RpS15"
+211 "RpS15Aa"
+212 "RpS3"
+213 "RpS8"
+214 "SPT15"
+215 "Scm"
+216 "Sec61-beta"
+217 "Sirt4"
+218 "Sox21b"
+219 "Sra-1"
+220 "SytIV"
+221 "Taf1"
+222 "Taf12"
+223 "Taf4"
+224 "Taf6"
+225 "Tango9"
+226 "Tektin-A"
+227 "Tequila"
+228 "TfIIB"
+229 "Traf2"
+230 "Trf"
+231 "Trf2"
+232 "Trl"
+233 "Ubc84D"
+234 "Ubx"
+235 "VP16"
+236 "WWOX"
+237 "X11L"
+238 "YL-1"
+239 "aPKC"
+240 "alpha-Tub84B"
+241 "arm"
+242 "baz"
+243 "bif"
+244 "bowl"
+245 "brk"
+246 "bsh"
+247 "cdc2"
+248 "cdc2c"
+249 "cm"
+250 "corto"
+251 "crb"
+252 "dap"
+253 "dlt"
+254 "drm"
+255 "e(y)1"
+256 "eIF2B-beta"
+257 "elfless"
+258 "emc"
+259 "esc"
+260 "exd"
+261 "exu"
+262 "fkh"
+263 "fng"
+264 "for"
+265 "fs(1)Ya"
+266 "ftz"
+267 "ftz-f1"
+268 "fws"
+269 "fz2"
+270 "gro"
+271 "h"
+272 "hbn"
+273 "inaD"
+274 "insc"
+275 "kirre"
+276 "l(1)G0004"
+277 "l(2)37Cc"
+278 "l(3)IX-14"
+279 "l(3)s2214"
+280 "lark"
+281 "lin"
+282 "lola"
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Added: trunk/deployment/cishell-installer/sampledata/Network/bio/TF_DNA_regulonDB.nwb
===================================================================
--- trunk/deployment/cishell-installer/sampledata/Network/bio/TF_DNA_regulonDB.nwb (rev 0)
+++ trunk/deployment/cishell-installer/sampledata/Network/bio/TF_DNA_regulonDB.nwb 2007-03-02 20:58:41 UTC (rev 375)
@@ -0,0 +1,4072 @@
+//Converted by Cesifoti for the NWB... :-)
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