[cilib-devel] [PATCH 0/3] Replacement of Domain string parser.

[Gary P. <gpa...@gm...>]

The need to have a decent parser for the domain strings is something
that has been on the cards for a very long time. The main problem with
the current implementation is that it is very non-expressive.

Illegal domains such as:
 - R(8, 9)^-1
 - R^0
 - Any other strange combination

were allowed in the previous parser.

These patches propose a new generated parser based on a provided grammar
file.

JJTree and JavaCC were used to achieve the parser.

Gary Pampara (3):
  Semi-complete parser definition.
  Deprecation of parser for generated parser.
  Prevent invalid values / options in domain strings.

 pom.xml                                            |   13 +
 .../bioinf/sequencealignment/BinaryMSAProblem.java |   12 +-
 .../cilib/bioinf/sequencealignment/MSAProblem.java |    5 +-
 .../controlparameter/BoundedControlParameter.java  |   12 +-
 .../functions/discrete/KnightCoverageProblem.java  |    1 -
 .../cilib/problem/ClusteringProblem.java           |    5 +-
 .../CooperativeOptimisationProblemAdapter.java     |   21 +-
 .../net/sourceforge/cilib/type/DomainBuilder.java  |    2 +
 .../net/sourceforge/cilib/type/DomainParser.java   |    2 +
 .../net/sourceforge/cilib/type/DomainRegistry.java |    2 +-
 .../sourceforge/cilib/type/DomainValidator.java    |    1 +
 .../cilib/type/StringBasedDomainRegistry.java      |   44 +---
 .../java/net/sourceforge/cilib/type/creator/B.java |   16 +-
 .../java/net/sourceforge/cilib/type/creator/R.java |    8 +
 .../java/net/sourceforge/cilib/type/creator/T.java |    7 +
 .../cilib/type/creator/TypeCreator.java            |    7 +
 .../java/net/sourceforge/cilib/type/creator/Z.java |    9 +
 .../cilib/type/parser/DomainParserVisitorImpl.java |  272 ++++++++++++++++++++
 src/main/jjtree/parser.jjt                         |   84 ++++++
 .../cilib/measurement/generic/IterationsTest.java  |   10 +-
 .../generic/PercentageCompleteTest.java            |   10 +-
 .../cilib/measurement/generic/RestartsTest.java    |   10 +-
 .../cilib/measurement/generic/TimeTest.java        |   10 +-
 .../measurement/multiple/MultipleFitnessTest.java  |   10 +-
 .../multiple/MultipleSolutionsTest.java            |   10 +-
 .../single/BestParticlePositionTest.java           |   14 +-
 .../cilib/measurement/single/DiameterTest.java     |   10 +-
 .../measurement/single/FitnessEvaluationsTest.java |   10 +-
 .../cilib/measurement/single/FitnessTest.java      |   10 +-
 .../single/FunctionOptimisationErrorTest.java      |   12 +-
 .../measurement/single/ParticlePositionsTest.java  |   10 +-
 .../cilib/measurement/single/SolutionTest.java     |   12 +-
 .../sourceforge/cilib/type/DomainParserTest.java   |  165 ++----------
 .../cilib/type/StringBasedDomainRegistryTest.java  |   20 +-
 .../cilib/type/parser/DomainParserTest.java        |  128 +++++++++
 35 files changed, 682 insertions(+), 292 deletions(-)
 create mode 100644 src/main/java/net/sourceforge/cilib/type/parser/DomainParserVisitorImpl.java
 create mode 100644 src/main/jjtree/parser.jjt
 create mode 100644 src/test/java/net/sourceforge/cilib/type/parser/DomainParserTest.java