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#2171 8(S)-HPETE anion

None
closed
5
2013-10-04
2013-08-14
RFoulger
No

Hello,

The submission tool isn't loading for me, so I'm creating a SF ticket instead. Please could I have a new ChEBI entry:

name: (5Z,8S,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate
synonyms:
8(S)-HPETE anion
(5Z,9E,11Z,14Z)-(8S)-8-Hydroxyperoxyeicosa-5,9,11,14-tetraenoate
(5Z,9E,11Z,14Z)-(8S)-8-hydroperoxyeicosa-5,9,11,14-tetraenoate
(5Z,9E,11Z,14Z)-(8S)-8-hydroperoxyicosa-5,9,11,14-tetraenoate

InchiKey: QQUFCXFFOZDXLA-VYOQERLCSA-M
C20H31O4
(taken from http://www.brenda-enzymes.org/php/ligand_flatfile.php4?brenda_ligand_id=219590)

is_a: HPETE anion ; CHEBI:59720
is conjugate base of 8(S)-HPETE ; CHEBI:34487

It's the product of my new GO term: arachidonate 8(S)-lipoxygenase activity ; GO:0036403
And the corresponding KEGG reaction: KEGG:R07053

I'm about to ask Rhea to create a corresponding reaction (similar to RHEA:14988, but producing the S-enantiomer)

It relates to the original GO SF request:
https://sourceforge.net/p/geneontology/ontology-requests/10305/

Thanks,
Becky

Discussion

  • Gareth Owen

    Gareth Owen - 2013-10-04
    • status: open --> pending
    • assigned_to: Gareth Owen
    • Group: -->
     
  • Gareth Owen

    Gareth Owen - 2013-10-04

    Hi Becky,

    Kristian beat us to this one. His submission, (S)-HPETE(1−) (CHEBI:75322) is currently visible on the ChEBI website. The completed and checked entry, including ontology classification, will become public with the November release of ChEBI, scheduled for Monday 4/11/13.

    Best regards,
    Gareth

     
  • Gareth Owen

    Gareth Owen - 2013-10-04
    • status: pending --> closed