Re: [Cg-pipeline-users] extract ORF sequences from cgpipeline

[Laure Q. <Lau...@if...>]

wow, sounds great, thank you.
Laure

Le 19/06/2013 16:21, Lee Katz a écrit :
> Jay Humphrey actually made a script a while ago, makefna.pl
> <http://makefna.pl>.  It looks like it will do exactly that.  I should
> incorporate it so that it spits out the fasta sequence after the
> prediction stage.  Good suggestion!
>
>
> On Wed, Jun 19, 2013 at 10:04 AM, Laure QUINTRIC
> <Lau...@if... <mailto:Lau...@if...>> wrote:
>
>     Hello,
>
>     I would like to know if there is a file generated by cgpipeline
>     containing all predicted ORFs nucleotide sequences or if it is
>     easily possible to generate it ?
>
>     Kind regards.
>     Laure
>
>
>
>
> --
> Lee Katz, Ph.D.