Recent changes to meta_search

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 19:00:15 -0000

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:59:17 -0000

--- v7
+++ v8
@@ -3,3 +3,5 @@
 Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.

 [Example](http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10) To search for meta terms with th1 in the name use %th1%
+
+[[img src=meta_search.png alt=meta_search]]

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:58:30 -0000

--- v6
+++ v7
@@ -1,3 +1,5 @@
+[Instructions]
+
 Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.

 [Example](http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10) To search for meta terms with th1 in the name use %th1%

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:58:05 -0000

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:56:03 -0000

--- v4
+++ v5
@@ -1,3 +1,3 @@
 Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.

-[Example](http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10)
+[Example](http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10) To search for meta terms with th1 in the name use %th1%

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:55:26 -0000

--- v3
+++ v4
@@ -1,3 +1,3 @@
 Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.

-[http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10 Example]
+[Example](http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10)

meta_search modified by Keith Ching

Keith Ching — Sat, 29 Oct 2016 18:54:16 -0000

--- v2
+++ v3
@@ -1 +1,3 @@
 Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.
+
+[http://54.149.52.246/cgi-bin/RPPA/cellx.cgi?expstat_high=10&compound_sourcename=ALL&kcluster=2&exp_ic50_low=100&maxsize=10&expmirna_numresults=25&combo_low=100&PLOTPOS=bottomright&vennexpgene6=%3e10&target=EGFR&ic50low=100&combination_id2=NONE&expcnv_colors=red+blue+green+violet+orange+yellow+black&mutation_source=NONE&combination_id=ALL&expcore_scale=none&expcnv_numresults=25&mirna_numresults=25&methylation_source=NONE&expmirna_low=1&activehtab=3&cnvminbp=10000&compound_source=NONE&source=ALL_HG18&venncnvgene4=%3e1&minsize=100&combination_datatype=ALL&vennexpgene3=%3e10&SUBMIT=SUBMIT&expstat_direction=both&expcor_numresults=25&expmirna_high=1&combo_cnv_cutoff=1&expcore_method=correlation&PLOTCUTOFFAXIS=Z&exp_ic50_high=500&tsvtable=meta_search&rppa_source=NONE&METACOLORS=green+blue&venn_segment=none&sort=mean&fisher_mutation_low=4&combo_high=500&active_Other=6&expcnv_low=1&expcore_top=100&expcore_datasets=10&fisher_mutation_high=10&active_Expression=1&venncnvgene1=%3e1&cnvamp=2&tissues=ALL&meta_search_field=%25th1%25&affy_source=NONE&expmut_numresults=25&vennexpgene1=%3e10&vennexpgene4=%3e10&venncnvgene2=%3e1&expcore_colors=red+blue+green+violet+orange+yellow+black&mut_expression_method=t-test&venncnvgene5=%3e1&mut_meth_method=t-test&searchtype=co-occur&venncnvgene6=%3e1&vennexpgene7=%3e10&venncnvgene7=%3e1&rnai_source=NONE&venncnvgene3=%3e1&expmirna_colors=red+blue+green+violet+orange+yellow+black&cnvdel=-2&tabledump_table=cells&mirna_source=NONE&metadata_source=NONE&mut_mirna_method=t-test&vennexpgene2=%3e10&expcore_direction=both&ic50high=500&expressionbarplot_type=none&expcnv_minsize=10&methmut_numresults=25&expcnv_high=1&vennexpgene5=%3e10&mean=2&expcnv_maxsize=10&expstat_low=4&percentile=5&expstat_numresults=25&cnvminsnp=10 Example]

meta_search modified by Keith Ching

Keith Ching — Sat, 16 Jan 2016 00:38:37 -0000

--- v1
+++ v2
@@ -1 +1 @@
-Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box.  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.
+Search for available meta terms.  Returns dataset and metaid if a keyword is entered into the search box. (use % as wildcards)  Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.

meta_search modified by Keith Ching

Keith Ching — Sat, 16 Jan 2016 00:30:26 -0000

Search for available meta terms. Returns dataset and metaid if a keyword is entered into the search box. Alternatively, if a HUGO symbol is entered into the HUGO search box, a list of pathways from the metagene table will be returned that contain the gene symbol.