expression_meta

[Instructions]

Find genes correlated or enriched between groups defined by meta data.

For example, it is easy to find sex specific gene expression by using the gender meta data type.

Enter a specific gene to get a plot

HUGO: gene symbol to check. If no gene selected, will search all genes.
EXPRESSION : Source of gene expression
META : Choose the matching metadata set. If no specific Metadata type selected, will test all metadata via F-test else pairwise t-test.
Generate table of meta specific gene expression : deprecated.
Include Normal Tissue : if checked, do not remove sample data from normal tissues (default do not include normals)
Include No Value : if checked, do not remove sample data that has no meta value recorded (default do not include data from samples with missing meta values)

Development:

Multiple meta data combinations: If you already know the gene you want to plot vs. metadata, you can show all combinations of two or more meta categories by adding additional meta values. Note there is a limit because the combinations can quickly increase.